RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 SIK1P57059 783 aa15.43■□□□□ 0.06
SLIRP-206ENST00000556375 ATG3Q9NT62 314 aa15.43■□□□□ 0.06
SLIRP-206ENST00000556375 SIPA1L3O60292 1781 aaPredicted RBP15.43■□□□□ 0.06
SLIRP-206ENST00000556375 MAP3K5Q99683 1374 aa15.42■□□□□ 0.06
SLIRP-206ENST00000556375 U2AF1L5P0DN76 240 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-206ENST00000556375 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
SLIRP-206ENST00000556375 U2AF1Q01081 240 aaKnown RBP eCLIP15.42■□□□□ 0.06
SLIRP-206ENST00000556375 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
SLIRP-206ENST00000556375 PNPLA7Q6ZV29 1317 aa15.42■□□□□ 0.06
SLIRP-206ENST00000556375 TFCP2L1Q9NZI6 479 aa15.41■□□□□ 0.06
SLIRP-206ENST00000556375 UBR2Q8IWV8 1755 aa15.41■□□□□ 0.06
SLIRP-206ENST00000556375 MYBBP1AQ9BQG0 1328 aaKnown RBP15.41■□□□□ 0.06
SLIRP-206ENST00000556375 TJP1Q07157 1748 aa15.4■□□□□ 0.06
SLIRP-206ENST00000556375 RNMTO43148 476 aaKnown RBP15.4■□□□□ 0.06
SLIRP-206ENST00000556375 FCHSD2O94868 740 aa15.4■□□□□ 0.06
SLIRP-206ENST00000556375 ZBTB7AO95365 584 aa15.4■□□□□ 0.06
SLIRP-206ENST00000556375 MTFR1LQ9H019 292 aa15.4■□□□□ 0.06
SLIRP-206ENST00000556375 SLC52A2Q9HAB3 445 aa15.4■□□□□ 0.06
SLIRP-206ENST00000556375 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
SLIRP-206ENST00000556375 LGR6Q9HBX8 967 aa15.39■□□□□ 0.05
SLIRP-206ENST00000556375 ATP6V1AP38606 617 aa15.38■□□□□ 0.05
SLIRP-206ENST00000556375 ITPK1Q13572 414 aa15.38■□□□□ 0.05
SLIRP-206ENST00000556375 SLC16A10Q8TF71 515 aa15.38■□□□□ 0.05
SLIRP-206ENST00000556375 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
SLIRP-206ENST00000556375 DLG5Q8TDM6 1919 aa15.38■□□□□ 0.05
SLIRP-206ENST00000556375 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
SLIRP-206ENST00000556375 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
SLIRP-206ENST00000556375 LINC00116Q8NCU8 138 aa15.37■□□□□ 0.05
SLIRP-206ENST00000556375 AK7Q96M32 723 aa15.37■□□□□ 0.05
SLIRP-206ENST00000556375 CEMIPQ8WUJ3 1361 aa15.36■□□□□ 0.05
SLIRP-206ENST00000556375 PTGER2P43116 358 aa15.36■□□□□ 0.05
SLIRP-206ENST00000556375 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
SLIRP-206ENST00000556375 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
SLIRP-206ENST00000556375 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-206ENST00000556375 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-206ENST00000556375 MYH14Q7Z406 1995 aaKnown RBP15.35■□□□□ 0.05
SLIRP-206ENST00000556375 FLAD1Q8NFF5 587 aa15.35■□□□□ 0.05
SLIRP-206ENST00000556375 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
SLIRP-206ENST00000556375 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-206ENST00000556375 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-206ENST00000556375 PTCD1O75127 700 aaKnown RBP15.34■□□□□ 0.05
SLIRP-206ENST00000556375 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
SLIRP-206ENST00000556375 IL17REQ8NFR9 667 aa15.34■□□□□ 0.05
SLIRP-206ENST00000556375 CNTNAP4Q9C0A0 1308 aa15.34■□□□□ 0.05
SLIRP-206ENST00000556375 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
SLIRP-206ENST00000556375 NEFMP07197 916 aa15.33■□□□□ 0.04
SLIRP-206ENST00000556375 SSFA2P28290 1259 aa15.33■□□□□ 0.04
SLIRP-206ENST00000556375 TEFQ10587 303 aa15.33■□□□□ 0.04
SLIRP-206ENST00000556375 GNPATO15228 680 aa15.32■□□□□ 0.04
SLIRP-206ENST00000556375 MSH5O43196 834 aa15.32■□□□□ 0.04
SLIRP-206ENST00000556375 AMIGO3Q86WK7 504 aa15.32■□□□□ 0.04
SLIRP-206ENST00000556375 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
SLIRP-206ENST00000556375 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
SLIRP-206ENST00000556375 SLC39A6Q13433 755 aa15.31■□□□□ 0.04
SLIRP-206ENST00000556375 RC3H1Q5TC82 1133 aaKnown RBP15.31■□□□□ 0.04
SLIRP-206ENST00000556375 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
SLIRP-206ENST00000556375 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
SLIRP-206ENST00000556375 PHF14O94880 888 aa15.3■□□□□ 0.04
SLIRP-206ENST00000556375 POLD1P28340 1107 aa15.3■□□□□ 0.04
SLIRP-206ENST00000556375 RTF1Q92541 710 aaKnown RBP15.3■□□□□ 0.04
SLIRP-206ENST00000556375 MAPK8IP3Q9UPT6 1336 aa15.3■□□□□ 0.04
SLIRP-206ENST00000556375 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
SLIRP-206ENST00000556375 ARXQ96QS3 562 aa15.29■□□□□ 0.04
SLIRP-206ENST00000556375 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
SLIRP-206ENST00000556375 KDM3BQ7LBC6 1761 aa15.29■□□□□ 0.04
SLIRP-206ENST00000556375 ADRA2BP18089 450 aa15.28■□□□□ 0.04
SLIRP-206ENST00000556375 CRKLP46109 303 aaKnown RBP15.28■□□□□ 0.04
SLIRP-206ENST00000556375 NFE2L2Q16236 605 aa15.28■□□□□ 0.04
SLIRP-206ENST00000556375 MCM10Q7L590 875 aa15.28■□□□□ 0.04
SLIRP-206ENST00000556375 VSIG10Q8N0Z9 540 aa15.28■□□□□ 0.04
SLIRP-206ENST00000556375 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
SLIRP-206ENST00000556375 MSL1Q68DK7 614 aa15.27■□□□□ 0.04
SLIRP-206ENST00000556375 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
SLIRP-206ENST00000556375 SMIM5Q71RC9 77 aa15.27■□□□□ 0.04
SLIRP-206ENST00000556375 DNAJC10Q8IXB1 793 aa15.27■□□□□ 0.04
SLIRP-206ENST00000556375 HEG1Q9ULI3 1381 aa15.26■□□□□ 0.03
SLIRP-206ENST00000556375 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
SLIRP-206ENST00000556375 BTBD11A6QL63 1104 aa15.25■□□□□ 0.03
SLIRP-206ENST00000556375 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
SLIRP-206ENST00000556375 ZNF496Q96IT1 587 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-206ENST00000556375 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
SLIRP-206ENST00000556375 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
SLIRP-206ENST00000556375 LAMB4A4D0S4 1761 aa15.25■□□□□ 0.03
SLIRP-206ENST00000556375 CYP19A1P11511 503 aaPredicted RBP15.24■□□□□ 0.03
SLIRP-206ENST00000556375 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
SLIRP-206ENST00000556375 INTS5Q6P9B9 1019 aaKnown RBP15.24■□□□□ 0.03
SLIRP-206ENST00000556375 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
SLIRP-206ENST00000556375 ARHGEF1Q92888 912 aaKnown RBP15.23■□□□□ 0.03
SLIRP-206ENST00000556375 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
SLIRP-206ENST00000556375 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
SLIRP-206ENST00000556375 SCN7AQ01118 1682 aa15.22■□□□□ 0.03
SLIRP-206ENST00000556375 KCNQ3O43525 872 aa15.21■□□□□ 0.03
SLIRP-206ENST00000556375 STARD3NLO95772 234 aa15.21■□□□□ 0.03
SLIRP-206ENST00000556375 RFC4P35249 363 aa15.21■□□□□ 0.03
SLIRP-206ENST00000556375 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
SLIRP-206ENST00000556375 TAF7Q15545 349 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-206ENST00000556375 RUNDC1Q96C34 613 aa15.21■□□□□ 0.03
SLIRP-206ENST00000556375 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
SLIRP-206ENST00000556375 ZBTB1Q9Y2K1 713 aa15.21■□□□□ 0.03
SLIRP-206ENST00000556375 COL15A1P39059 1388 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms