RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 DYRK1BQ9Y463 629 aa7.36□□□□□ -1.23
SUPT16H-206ENST00000556309 PCDHB11Q9Y5F2 797 aa7.36□□□□□ -1.23
SUPT16H-206ENST00000556309 WDR44Q5JSH3 913 aa7.35□□□□□ -1.23
SUPT16H-206ENST00000556309 RNF135Q8IUD6 432 aa7.35□□□□□ -1.23
SUPT16H-206ENST00000556309 ZNF592Q92610 1267 aa7.35□□□□□ -1.23
SUPT16H-206ENST00000556309 ZNF395Q9H8N7 513 aaPredicted RBP7.35□□□□□ -1.23
SUPT16H-206ENST00000556309 CYLDQ9NQC7 956 aa7.35□□□□□ -1.23
SUPT16H-206ENST00000556309 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
SUPT16H-206ENST00000556309 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
SUPT16H-206ENST00000556309 ZNF784Q8NCA9 323 aaPredicted RBP7.34□□□□□ -1.23
SUPT16H-206ENST00000556309 UCN2Q96RP3 112 aa7.34□□□□□ -1.23
SUPT16H-206ENST00000556309 OIP5O43482 229 aa7.33□□□□□ -1.24
SUPT16H-206ENST00000556309 SKIP12755 728 aa7.33□□□□□ -1.24
SUPT16H-206ENST00000556309 SCTRP47872 440 aa7.33□□□□□ -1.24
SUPT16H-206ENST00000556309 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
SUPT16H-206ENST00000556309 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
SUPT16H-206ENST00000556309 ITGB2P05107 769 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 MX2P20592 715 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 BAG6P46379 1132 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 OXLD1Q5BKU9 147 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 TBC1D9Q6ZT07 1266 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 DEPDC4Q8N2C3 294 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 PLPP7Q8NBV4 271 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 DOLKQ9UPQ8 538 aa7.32□□□□□ -1.24
SUPT16H-206ENST00000556309 LILRA1O75019 489 aa7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 ADD1P35611 737 aaKnown RBP7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 Q8N3U1 123 aa7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 ACDQ96AP0 544 aa7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 C1orf115Q9H7X2 142 aa7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 GDF2Q9UK05 429 aaPredicted RBP7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 PHF24Q9UPV7 400 aa7.31□□□□□ -1.24
SUPT16H-206ENST00000556309 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
SUPT16H-206ENST00000556309 ERICH6Q7L0X2 663 aa7.3□□□□□ -1.24
SUPT16H-206ENST00000556309 CFHR5Q9BXR6 569 aa7.3□□□□□ -1.24
SUPT16H-206ENST00000556309 TFIP11Q9UBB9 837 aaKnown RBP7.3□□□□□ -1.24
SUPT16H-206ENST00000556309 CHIC2Q9UKJ5 165 aa7.3□□□□□ -1.24
SUPT16H-206ENST00000556309 CC2D2BQ6DHV5 1058 aa7.29□□□□□ -1.24
SUPT16H-206ENST00000556309 PRICKLE2Q7Z3G6 844 aa7.29□□□□□ -1.24
SUPT16H-206ENST00000556309 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
SUPT16H-206ENST00000556309 PALM3A6NDB9 673 aaPredicted RBP7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 ATP5J2-PTCD1G3V325 749 aa7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 ATP9BO43861 1147 aa7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 ERVK-9P63128 1117 aa7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 DBN1Q16643 649 aa7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 PPP1R12CQ9BZL4 782 aa7.28□□□□□ -1.24
SUPT16H-206ENST00000556309 USP17L5A8MUK1 530 aa7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 RFX1P22670 979 aa7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 NCOA4Q13772 614 aa7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 LBRQ14739 615 aaKnown RBP7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 KDF1Q8NAX2 398 aaPredicted RBP7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 GTPBP3Q969Y2 492 aaKnown RBP7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 OSBPL3Q9H4L5 887 aa7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 ESF1Q9H501 851 aaKnown RBP7.27□□□□□ -1.25
SUPT16H-206ENST00000556309 USP17L3A6NCW0 530 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 USP17L4A6NCW7 530 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 MYCP01106 439 aaPredicted RBP7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 LMOD1P29536 600 aaPredicted RBP7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 MAP7D1Q3KQU3 841 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 USP17L2Q6R6M4 530 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 USP17L1Q7RTZ2 530 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 GOLGA6L1Q8N7Z2 621 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 NLRP3Q96P20 1036 aa7.26□□□□□ -1.25
SUPT16H-206ENST00000556309 SPATA31C2B4DYI2 1134 aa7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 F11P03951 625 aa7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 USP4Q13107 963 aa7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 EML3Q32P44 896 aa7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 CCDC82Q8N4S0 544 aa7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 NFATC2IPQ8NCF5 419 aa7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 NUCKS1Q9H1E3 243 aaKnown RBP7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 NOP53Q9NZM5 478 aaKnown RBP7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 MAFBQ9Y5Q3 323 aaPredicted RBP7.25□□□□□ -1.25
SUPT16H-206ENST00000556309 KRBA1A5PL33 1030 aa7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 GPR25O00155 361 aa7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 RHOQP17081 205 aa7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 CDCA8Q53HL2 280 aa7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 SLC27A3Q5K4L6 730 aa7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 CCDC97Q96F63 343 aaPredicted RBP7.24□□□□□ -1.25
SUPT16H-206ENST00000556309 GAS2L1Q99501 681 aaPredicted RBP7.23□□□□□ -1.25
SUPT16H-206ENST00000556309 ARID3AQ99856 593 aa7.23□□□□□ -1.25
SUPT16H-206ENST00000556309 RAB6BQ9NRW1 208 aa7.23□□□□□ -1.25
SUPT16H-206ENST00000556309 MKRN1Q9UHC7 482 aaKnown RBP7.23□□□□□ -1.25
SUPT16H-206ENST00000556309 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
SUPT16H-206ENST00000556309 CYP2U1Q7Z449 544 aa7.22□□□□□ -1.25
SUPT16H-206ENST00000556309 NBPF15Q8N660 670 aa7.22□□□□□ -1.25
SUPT16H-206ENST00000556309 GRIP2Q9C0E4 1043 aa7.22□□□□□ -1.25
SUPT16H-206ENST00000556309 ARHGEF10LQ9HCE6 1279 aa7.22□□□□□ -1.25
SUPT16H-206ENST00000556309 NOD1Q9Y239 953 aa7.22□□□□□ -1.25
SUPT16H-206ENST00000556309 A0A1W2PRU2 124 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 MEN1O00255 615 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 GNB5O14775 395 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 GTF2IP78347 998 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 CLN3Q13286 438 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 TAS1R3Q7RTX0 852 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 PLEKHM2Q8IWE5 1019 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 SIRT1Q96EB6 747 aa7.21□□□□□ -1.26
SUPT16H-206ENST00000556309 TIMMDC1Q9NPL8 285 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms