RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
SDR39U1-217ENST00000556249 TMOD3Q9NYL9 352 aa22.06■■□□□ 1.12
SDR39U1-217ENST00000556249 PKD1L3Q7Z443 1732 aa22.04■■□□□ 1.12
SDR39U1-217ENST00000556249 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
SDR39U1-217ENST00000556249 DPEP1P16444 411 aa22.03■■□□□ 1.12
SDR39U1-217ENST00000556249 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
SDR39U1-217ENST00000556249 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
SDR39U1-217ENST00000556249 FCHSD2O94868 740 aa22.02■■□□□ 1.12
SDR39U1-217ENST00000556249 TGFB2P61812 414 aa22.02■■□□□ 1.12
SDR39U1-217ENST00000556249 TRAPPC3LQ5T215 181 aa22.01■■□□□ 1.11
SDR39U1-217ENST00000556249 TMF1P82094 1093 aa22■■□□□ 1.11
SDR39U1-217ENST00000556249 COL13A1Q5TAT6 717 aaPredicted RBP22■■□□□ 1.11
SDR39U1-217ENST00000556249 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 KIF20BQ96Q89 1820 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 CAPN15O75808 1086 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 PHKG2P15735 406 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 ARHGEF1Q92888 912 aaKnown RBP21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 SLC4A9Q96Q91 983 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 EYA1Q99502 592 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 RTCBQ9Y3I0 505 aaKnown RBP21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
SDR39U1-217ENST00000556249 C9orf131Q5VYM1 1079 aa21.98■■□□□ 1.11
SDR39U1-217ENST00000556249 NLGN1Q8N2Q7 840 aa21.98■■□□□ 1.11
SDR39U1-217ENST00000556249 CARD14Q9BXL6 1004 aa21.98■■□□□ 1.11
SDR39U1-217ENST00000556249 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
SDR39U1-217ENST00000556249 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
SDR39U1-217ENST00000556249 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
SDR39U1-217ENST00000556249 RBM42Q9BTD8 480 aaKnown RBP21.97■■□□□ 1.11
SDR39U1-217ENST00000556249 WDR90Q96KV7 1748 aa21.97■■□□□ 1.11
SDR39U1-217ENST00000556249 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
SDR39U1-217ENST00000556249 C16orf71Q8IYS4 520 aaPredicted RBP21.96■■□□□ 1.11
SDR39U1-217ENST00000556249 RBM46Q8TBY0 533 aaKnown RBP21.96■■□□□ 1.11
SDR39U1-217ENST00000556249 KLRG1Q96E93 195 aa21.96■■□□□ 1.11
SDR39U1-217ENST00000556249 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
SDR39U1-217ENST00000556249 GYS1P13807 737 aa21.95■■□□□ 1.1
SDR39U1-217ENST00000556249 KCNA3P22001 575 aa21.95■■□□□ 1.1
SDR39U1-217ENST00000556249 PARP3Q9Y6F1 533 aa21.94■■□□□ 1.1
SDR39U1-217ENST00000556249 RFC4P35249 363 aa21.93■■□□□ 1.1
SDR39U1-217ENST00000556249 KDRP35968 1356 aa21.93■■□□□ 1.1
SDR39U1-217ENST00000556249 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
SDR39U1-217ENST00000556249 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
SDR39U1-217ENST00000556249 KCPQ6ZWJ8 1503 aa21.92■■□□□ 1.1
SDR39U1-217ENST00000556249 WASHC2AQ641Q2 1341 aa21.92■■□□□ 1.1
SDR39U1-217ENST00000556249 RRAGCQ9HB90 399 aa21.92■■□□□ 1.1
SDR39U1-217ENST00000556249 JMYQ8N9B5 988 aa21.9■■□□□ 1.1
SDR39U1-217ENST00000556249 RNF181Q9P0P0 153 aa21.9■■□□□ 1.1
SDR39U1-217ENST00000556249 PIM2Q9P1W9 311 aa21.9■■□□□ 1.1
SDR39U1-217ENST00000556249 BRCA1P38398 1863 aaKnown RBP21.9■■□□□ 1.1
SDR39U1-217ENST00000556249 RPS6KA4O75676 772 aa21.89■■□□□ 1.09
SDR39U1-217ENST00000556249 SRP68Q9UHB9 627 aaKnown RBP21.89■■□□□ 1.09
SDR39U1-217ENST00000556249 ADRA2BP18089 450 aa21.88■■□□□ 1.09
SDR39U1-217ENST00000556249 CHRNA5P30532 468 aa21.88■■□□□ 1.09
SDR39U1-217ENST00000556249 FSTL1Q12841 308 aa21.88■■□□□ 1.09
SDR39U1-217ENST00000556249 RC3H1Q5TC82 1133 aaKnown RBP21.88■■□□□ 1.09
SDR39U1-217ENST00000556249 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
SDR39U1-217ENST00000556249 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
SDR39U1-217ENST00000556249 CNTNAP4Q9C0A0 1308 aa21.87■■□□□ 1.09
SDR39U1-217ENST00000556249 TNNT2P45379 298 aaPredicted RBP21.87■■□□□ 1.09
SDR39U1-217ENST00000556249 DALRD3Q5D0E6 543 aaKnown RBP21.87■■□□□ 1.09
SDR39U1-217ENST00000556249 PLEKHG2Q9H7P9 1386 aa21.87■■□□□ 1.09
SDR39U1-217ENST00000556249 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
SDR39U1-217ENST00000556249 EIF4A2Q14240 407 aaKnown RBP21.86■■□□□ 1.09
SDR39U1-217ENST00000556249 FKBP8Q14318 412 aa21.86■■□□□ 1.09
SDR39U1-217ENST00000556249 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
SDR39U1-217ENST00000556249 PTCD1O75127 700 aaKnown RBP21.85■■□□□ 1.09
SDR39U1-217ENST00000556249 DDR1Q08345 913 aa21.85■■□□□ 1.09
SDR39U1-217ENST00000556249 MYH14Q7Z406 1995 aaKnown RBP21.85■■□□□ 1.09
SDR39U1-217ENST00000556249 COL5A3P25940 1745 aaPredicted RBP21.84■■□□□ 1.09
SDR39U1-217ENST00000556249 ANKRD26Q9UPS8 1709 aa21.84■■□□□ 1.09
SDR39U1-217ENST00000556249 ERVV-2B6SEH9 535 aa21.84■■□□□ 1.09
SDR39U1-217ENST00000556249 ARFGEF1Q9Y6D6 1849 aa21.84■■□□□ 1.09
SDR39U1-217ENST00000556249 CABP4P57796 275 aa21.83■■□□□ 1.09
SDR39U1-217ENST00000556249 CDCA8Q53HL2 280 aa21.83■■□□□ 1.09
SDR39U1-217ENST00000556249 PCNTO95613 3336 aa21.82■■□□□ 1.08
SDR39U1-217ENST00000556249 CRKLP46109 303 aaKnown RBP21.81■■□□□ 1.08
SDR39U1-217ENST00000556249 RASSF7Q02833 373 aa21.81■■□□□ 1.08
SDR39U1-217ENST00000556249 KDM6AO15550 1401 aaPredicted RBP21.8■■□□□ 1.08
SDR39U1-217ENST00000556249 SMC1BQ8NDV3 1235 aa21.8■■□□□ 1.08
SDR39U1-217ENST00000556249 EIF4G2P78344 907 aaKnown RBP eCLIP21.79■■□□□ 1.08
SDR39U1-217ENST00000556249 ZNF530Q6P9A1 599 aaPredicted RBP21.79■■□□□ 1.08
SDR39U1-217ENST00000556249 USP42Q9H9J4 1324 aaKnown RBP21.79■■□□□ 1.08
SDR39U1-217ENST00000556249 ZNF831Q5JPB2 1677 aa21.79■■□□□ 1.08
SDR39U1-217ENST00000556249 HSP90AB1P08238 724 aaKnown RBP21.78■■□□□ 1.08
SDR39U1-217ENST00000556249 PRELPP51888 382 aa21.78■■□□□ 1.08
SDR39U1-217ENST00000556249 SBF1O95248 1867 aa21.77■■□□□ 1.08
SDR39U1-217ENST00000556249 PLEKHO1Q53GL0 409 aaPredicted RBP21.77■■□□□ 1.08
SDR39U1-217ENST00000556249 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
SDR39U1-217ENST00000556249 POLRMTO00411 1230 aaKnown RBP21.76■■□□□ 1.07
SDR39U1-217ENST00000556249 MTHFSP49914 203 aa21.76■■□□□ 1.07
SDR39U1-217ENST00000556249 POLR3GLQ9BT43 218 aa21.76■■□□□ 1.07
SDR39U1-217ENST00000556249 HSPA1AP0DMV8 641 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-217ENST00000556249 HSPA1BP0DMV9 641 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-217ENST00000556249 TM4SF1P30408 202 aa21.75■■□□□ 1.07
SDR39U1-217ENST00000556249 INTS5Q6P9B9 1019 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-217ENST00000556249 TNRC6CQ9HCJ0 1690 aaKnown RBP21.75■■□□□ 1.07
SDR39U1-217ENST00000556249 USPL1Q5W0Q7 1092 aa21.74■■□□□ 1.07
SDR39U1-217ENST00000556249 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
SDR39U1-217ENST00000556249 HSPA5P11021 654 aaKnown RBP21.73■■□□□ 1.07
SDR39U1-217ENST00000556249 VEGFAP15692 232 aaPredicted RBP21.71■■□□□ 1.07
SDR39U1-217ENST00000556249 AMOTQ4VCS5 1084 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms