RNA–Protein interactions for RNA: ENST00000556074.5

NEMF-209, Transcript of nuclear export mediator factor, humanhuman

TSL 1 (best)

Gene NEMF, Length 3,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-209ENST00000556074 C12orf49Q9H741 205 aa9.02□□□□□ -0.96
NEMF-209ENST00000556074 KANSL2Q9H9L4 492 aa9.02□□□□□ -0.96
NEMF-209ENST00000556074 CREBZFQ9NS37 354 aa9.02□□□□□ -0.96
NEMF-209ENST00000556074 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 PPP1R12AO14974 1030 aaPredicted RBP9.02□□□□□ -0.97
NEMF-209ENST00000556074 L1TD1Q5T7N2 865 aaKnown RBP9.02□□□□□ -0.97
NEMF-209ENST00000556074 PGBD3Q8N328 593 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 ENAMQ9NRM1 1142 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 PLIN1O60240 522 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 ZNF76P36508 570 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
NEMF-209ENST00000556074 STAC3Q96MF2 364 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 IFT122Q9HBG6 1241 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 CEP126Q9P2H0 1117 aa9.02□□□□□ -0.97
NEMF-209ENST00000556074 TCERG1O14776 1098 aaKnown RBP9.01□□□□□ -0.97
NEMF-209ENST00000556074 ICMTO60725 284 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 TGFB3P10600 412 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 RRM1P23921 792 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 SERINC3Q13530 473 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 AKT1S1Q96B36 256 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
NEMF-209ENST00000556074 ANAPC4Q9UJX5 808 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 HDAC5Q9UQL6 1122 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L15C9J2P7 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L10C9JJH3 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L13C9JLJ4 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L12C9JPN9 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L11C9JVI0 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L21D6R901 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L18D6R9N7 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L22D6RA61 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L17D6RBQ6 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L19D6RCP7 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L20D6RJB6 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 TBX3O15119 743 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 CT47B1P0C2W7 299 aaPredicted RBP9.01□□□□□ -0.97
NEMF-209ENST00000556074 USP17L24Q0WX57 530 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 GLYCTKQ8IVS8 523 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 DDX12PQ92771 950 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 CEP89Q96ST8 783 aa9.01□□□□□ -0.97
NEMF-209ENST00000556074 FEZ2Q9UHY8 353 aaPredicted RBP9.01□□□□□ -0.97
NEMF-209ENST00000556074 ARHGAP4P98171 946 aa9□□□□□ -0.97
NEMF-209ENST00000556074 LRRC41Q15345 812 aa9□□□□□ -0.97
NEMF-209ENST00000556074 RGL4Q8IZJ4 473 aa9□□□□□ -0.97
NEMF-209ENST00000556074 DIS3Q9Y2L1 958 aaKnown RBP9□□□□□ -0.97
NEMF-209ENST00000556074 PCDHGB7Q9Y5F8 929 aa9□□□□□ -0.97
NEMF-209ENST00000556074 KIF3BO15066 747 aa9□□□□□ -0.97
NEMF-209ENST00000556074 ZNF394Q53GI3 561 aa9□□□□□ -0.97
NEMF-209ENST00000556074 RELTQ969Z4 430 aa9□□□□□ -0.97
NEMF-209ENST00000556074 PPCSQ9HAB8 311 aa9□□□□□ -0.97
NEMF-209ENST00000556074 RACK1P63244 317 aaKnown RBP8.99□□□□□ -0.97
NEMF-209ENST00000556074 RAPGEF1Q13905 1077 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 DSG2Q14126 1118 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 BRD3Q15059 726 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.99□□□□□ -0.97
NEMF-209ENST00000556074 RSPH1Q8WYR4 309 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 PARP2Q9UGN5 583 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 NPHP1O15259 732 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 LILRB3O75022 631 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 HIP1RO75146 1068 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 CHPFQ8IZ52 775 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 MPNDQ8N594 471 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 EGFL7Q9UHF1 273 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 PRMT3O60678 531 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 CAND2O75155 1236 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 CNGB1Q14028 1251 aaPredicted RBP8.99□□□□□ -0.97
NEMF-209ENST00000556074 PPP4R4Q6NUP7 873 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 HOMER2Q9NSB8 354 aa8.99□□□□□ -0.97
NEMF-209ENST00000556074 SETD1BQ9UPS6 1966 aaKnown RBP8.98□□□□□ -0.97
NEMF-209ENST00000556074 BICDL2A1A5D9 508 aa8.98□□□□□ -0.97
NEMF-209ENST00000556074 CDC27P30260 824 aa8.98□□□□□ -0.97
NEMF-209ENST00000556074 SF3B2Q13435 895 aaKnown RBP8.98□□□□□ -0.97
NEMF-209ENST00000556074 FAM196BA6NMK8 535 aa8.98□□□□□ -0.97
NEMF-209ENST00000556074 KRT18P05783 430 aaKnown RBP8.98□□□□□ -0.97
NEMF-209ENST00000556074 CDKN1CP49918 316 aaPredicted RBP8.98□□□□□ -0.97
NEMF-209ENST00000556074 NEXNQ0ZGT2 675 aa8.98□□□□□ -0.97
NEMF-209ENST00000556074 INO80DQ53TQ3 878 aaPredicted RBP8.98□□□□□ -0.97
NEMF-209ENST00000556074 CCDC93Q567U6 631 aa8.98□□□□□ -0.97
NEMF-209ENST00000556074 PTPRHQ9HD43 1115 aa8.98□□□□□ -0.97
NEMF-209ENST00000556074 TMEM95Q3KNT9 176 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 PODNQ7Z5L7 613 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 PCDHB15Q9Y5E8 787 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 USP17L3A6NCW0 530 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 USP17L4A6NCW7 530 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 SPTLC1O15269 473 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 TSPAN6O43657 245 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 RNASEH2AO75792 299 aaKnown RBP8.97□□□□□ -0.97
NEMF-209ENST00000556074 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 USP17L1Q7RTZ2 530 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 NOS2P35228 1153 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 NFE2Q16621 373 aaPredicted RBP8.97□□□□□ -0.97
NEMF-209ENST00000556074 TUSC1Q2TAM9 212 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 ALDH1L2Q3SY69 923 aa8.97□□□□□ -0.97
NEMF-209ENST00000556074 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
NEMF-209ENST00000556074 FAM126AQ9BYI3 521 aaPredicted RBP8.97□□□□□ -0.97
NEMF-209ENST00000556074 NOL7Q9UMY1 257 aaKnown RBP8.97□□□□□ -0.97
NEMF-209ENST00000556074 PTK7Q13308 1070 aa8.96□□□□□ -0.97
NEMF-209ENST00000556074 MTMR3Q13615 1198 aa8.96□□□□□ -0.97
NEMF-209ENST00000556074 MRS2Q9HD23 443 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms