RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 PLEKHG2Q9H7P9 1386 aa21.74■■□□□ 1.07
CCDC85C-204ENST00000555822 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
CCDC85C-204ENST00000555822 MPRIPQ6WCQ1 1025 aa21.74■■□□□ 1.07
CCDC85C-204ENST00000555822 ITGB4P16144 1822 aa21.72■■□□□ 1.07
CCDC85C-204ENST00000555822 PHF14O94880 888 aa21.71■■□□□ 1.07
CCDC85C-204ENST00000555822 FLAD1Q8NFF5 587 aa21.71■■□□□ 1.07
CCDC85C-204ENST00000555822 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.7■■□□□ 1.06
CCDC85C-204ENST00000555822 NKX1-1Q15270 411 aaPredicted RBP21.7■■□□□ 1.06
CCDC85C-204ENST00000555822 MTHFSP49914 203 aa21.69■■□□□ 1.06
CCDC85C-204ENST00000555822 IFNL2Q8IZJ0 200 aa21.69■■□□□ 1.06
CCDC85C-204ENST00000555822 DNAJC5GQ8N7S2 189 aa21.69■■□□□ 1.06
CCDC85C-204ENST00000555822 LINC00116Q8NCU8 138 aa21.69■■□□□ 1.06
CCDC85C-204ENST00000555822 PIGBQ92521 554 aa21.69■■□□□ 1.06
CCDC85C-204ENST00000555822 IL13P35225 146 aa21.68■■□□□ 1.06
CCDC85C-204ENST00000555822 AK7Q96M32 723 aa21.68■■□□□ 1.06
CCDC85C-204ENST00000555822 PHKG2P15735 406 aa21.67■■□□□ 1.06
CCDC85C-204ENST00000555822 PLEKHO1Q53GL0 409 aaPredicted RBP21.67■■□□□ 1.06
CCDC85C-204ENST00000555822 KIAA1551Q9HCM1 1747 aa21.66■■□□□ 1.06
CCDC85C-204ENST00000555822 CICQ96RK0 1608 aaPredicted RBP21.66■■□□□ 1.06
CCDC85C-204ENST00000555822 COL3A1P02461 1466 aaPredicted RBP21.65■■□□□ 1.06
CCDC85C-204ENST00000555822 ITPK1Q13572 414 aa21.65■■□□□ 1.06
CCDC85C-204ENST00000555822 SULT6B1Q6IMI4 303 aa21.65■■□□□ 1.06
CCDC85C-204ENST00000555822 PPP2R1AP30153 589 aa21.64■■□□□ 1.05
CCDC85C-204ENST00000555822 AMOTQ4VCS5 1084 aa21.64■■□□□ 1.05
CCDC85C-204ENST00000555822 AEBP1Q8IUX7 1158 aa21.64■■□□□ 1.05
CCDC85C-204ENST00000555822 KDRP35968 1356 aa21.63■■□□□ 1.05
CCDC85C-204ENST00000555822 SMARCC1Q92922 1105 aaPredicted RBP21.63■■□□□ 1.05
CCDC85C-204ENST00000555822 PXDNLA1KZ92 1463 aa21.63■■□□□ 1.05
CCDC85C-204ENST00000555822 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
CCDC85C-204ENST00000555822 RALBP1Q15311 655 aa21.62■■□□□ 1.05
CCDC85C-204ENST00000555822 LOC102724428A0A0B4J2F2 783 aa21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 DIAPH1O60610 1272 aaKnown RBP21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 HMGB2P26583 209 aaKnown RBP21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 SSFA2P28290 1259 aa21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 SIK1P57059 783 aa21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 ASAP1Q9ULH1 1129 aa21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 N4BP2Q86UW6 1770 aaPredicted RBP21.61■■□□□ 1.05
CCDC85C-204ENST00000555822 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
CCDC85C-204ENST00000555822 TMOD3Q9NYL9 352 aa21.6■■□□□ 1.05
CCDC85C-204ENST00000555822 KIF13BQ9NQT8 1826 aa21.59■■□□□ 1.05
CCDC85C-204ENST00000555822 MMP10P09238 476 aa21.59■■□□□ 1.05
CCDC85C-204ENST00000555822 APLP1P51693 650 aa21.59■■□□□ 1.05
CCDC85C-204ENST00000555822 HTRA3P83110 453 aa21.59■■□□□ 1.05
CCDC85C-204ENST00000555822 DCAF5Q96JK2 942 aa21.58■■□□□ 1.05
CCDC85C-204ENST00000555822 CFAP53Q96M91 514 aa21.58■■□□□ 1.05
CCDC85C-204ENST00000555822 A0A0G2JLW4 131 aa21.57■■□□□ 1.04
CCDC85C-204ENST00000555822 ERVV-2B6SEH9 535 aa21.57■■□□□ 1.04
CCDC85C-204ENST00000555822 GNPATO15228 680 aa21.57■■□□□ 1.04
CCDC85C-204ENST00000555822 C1orf141Q5JVX7 400 aa21.57■■□□□ 1.04
CCDC85C-204ENST00000555822 SLC4A9Q96Q91 983 aa21.57■■□□□ 1.04
CCDC85C-204ENST00000555822 PCNTO95613 3336 aa21.57■■□□□ 1.04
CCDC85C-204ENST00000555822 TOMM70O94826 608 aa21.56■■□□□ 1.04
CCDC85C-204ENST00000555822 HMOX1P09601 288 aa21.55■■□□□ 1.04
CCDC85C-204ENST00000555822 ATG3Q9NT62 314 aa21.55■■□□□ 1.04
CCDC85C-204ENST00000555822 BCS1LQ9Y276 419 aa21.55■■□□□ 1.04
CCDC85C-204ENST00000555822 KDM6AO15550 1401 aaPredicted RBP21.54■■□□□ 1.04
CCDC85C-204ENST00000555822 DPEP1P16444 411 aa21.53■■□□□ 1.04
CCDC85C-204ENST00000555822 ATP6V1AP38606 617 aa21.53■■□□□ 1.04
CCDC85C-204ENST00000555822 C10orf71Q711Q0 1435 aa21.53■■□□□ 1.04
CCDC85C-204ENST00000555822 KCNA3P22001 575 aa21.52■■□□□ 1.04
CCDC85C-204ENST00000555822 COL13A1Q5TAT6 717 aaPredicted RBP21.52■■□□□ 1.04
CCDC85C-204ENST00000555822 PRKRIP1Q9H875 184 aaPredicted RBP21.52■■□□□ 1.04
CCDC85C-204ENST00000555822 MYBBP1AQ9BQG0 1328 aaKnown RBP21.52■■□□□ 1.03
CCDC85C-204ENST00000555822 BRCA1P38398 1863 aaKnown RBP21.52■■□□□ 1.03
CCDC85C-204ENST00000555822 U2SURPO15042 1029 aaKnown RBP21.51■■□□□ 1.03
CCDC85C-204ENST00000555822 CABP4P57796 275 aa21.51■■□□□ 1.03
CCDC85C-204ENST00000555822 AKAP4Q5JQC9 854 aa21.51■■□□□ 1.03
CCDC85C-204ENST00000555822 ARHGAP27Q6ZUM4 889 aa21.51■■□□□ 1.03
CCDC85C-204ENST00000555822 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
CCDC85C-204ENST00000555822 WDR90Q96KV7 1748 aa21.5■■□□□ 1.03
CCDC85C-204ENST00000555822 TGFB2P61812 414 aa21.5■■□□□ 1.03
CCDC85C-204ENST00000555822 ARHGEF1Q92888 912 aaKnown RBP21.49■■□□□ 1.03
CCDC85C-204ENST00000555822 NUDCQ9Y266 331 aa21.49■■□□□ 1.03
CCDC85C-204ENST00000555822 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
CCDC85C-204ENST00000555822 SCN11AQ9UI33 1791 aa21.48■■□□□ 1.03
CCDC85C-204ENST00000555822 GYS1P13807 737 aa21.47■■□□□ 1.03
CCDC85C-204ENST00000555822 C9orf131Q5VYM1 1079 aa21.47■■□□□ 1.03
CCDC85C-204ENST00000555822 FCHSD2O94868 740 aa21.46■■□□□ 1.03
CCDC85C-204ENST00000555822 MTHFSDQ2M296 383 aaKnown RBP21.46■■□□□ 1.03
CCDC85C-204ENST00000555822 TRAPPC3LQ5T215 181 aa21.46■■□□□ 1.03
CCDC85C-204ENST00000555822 RBM46Q8TBY0 533 aaKnown RBP21.46■■□□□ 1.03
CCDC85C-204ENST00000555822 C4AP0C0L4 1744 aa21.46■■□□□ 1.03
CCDC85C-204ENST00000555822 JMYQ8N9B5 988 aa21.45■■□□□ 1.02
CCDC85C-204ENST00000555822 KLRG1Q96E93 195 aa21.45■■□□□ 1.02
CCDC85C-204ENST00000555822 NLGN1Q8N2Q7 840 aa21.44■■□□□ 1.02
CCDC85C-204ENST00000555822 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
CCDC85C-204ENST00000555822 RTCBQ9Y3I0 505 aaKnown RBP21.44■■□□□ 1.02
CCDC85C-204ENST00000555822 ZNF831Q5JPB2 1677 aa21.44■■□□□ 1.02
CCDC85C-204ENST00000555822 RNMTO43148 476 aaKnown RBP21.43■■□□□ 1.02
CCDC85C-204ENST00000555822 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
CCDC85C-204ENST00000555822 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
CCDC85C-204ENST00000555822 KCPQ6ZWJ8 1503 aa21.43■■□□□ 1.02
CCDC85C-204ENST00000555822 COL5A3P25940 1745 aaPredicted RBP21.42■■□□□ 1.02
CCDC85C-204ENST00000555822 ARFGEF1Q9Y6D6 1849 aa21.42■■□□□ 1.02
CCDC85C-204ENST00000555822 U2AF1L5P0DN76 240 aaPredicted RBP21.41■■□□□ 1.02
CCDC85C-204ENST00000555822 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCDC85C-204ENST00000555822 SLC52A2Q9HAB3 445 aa21.41■■□□□ 1.02
CCDC85C-204ENST00000555822 LGR6Q9HBX8 967 aa21.41■■□□□ 1.02
CCDC85C-204ENST00000555822 CCDC87Q9NVE4 849 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms