RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 MAP2P11137 1827 aaKnown RBP17.19■□□□□ 0.34
ABCD4-222ENST00000555617 MKI67P46013 3256 aaKnown RBP17.19■□□□□ 0.34
ABCD4-222ENST00000555617 NSD3Q9BZ95 1437 aa17.19■□□□□ 0.34
ABCD4-222ENST00000555617 MEGF6O75095 1541 aa17.18■□□□□ 0.34
ABCD4-222ENST00000555617 SLC17A8Q8NDX2 589 aa17.18■□□□□ 0.34
ABCD4-222ENST00000555617 ADAMTSL1Q8N6G6 1762 aa17.17■□□□□ 0.34
ABCD4-222ENST00000555617 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
ABCD4-222ENST00000555617 DICER1Q9UPY3 1922 aaKnown RBP17.17■□□□□ 0.34
ABCD4-222ENST00000555617 LMNB1P20700 586 aa17.16■□□□□ 0.34
ABCD4-222ENST00000555617 SSFA2P28290 1259 aa17.16■□□□□ 0.34
ABCD4-222ENST00000555617 CHRNA5P30532 468 aa17.16■□□□□ 0.34
ABCD4-222ENST00000555617 LTN1O94822 1766 aa17.15■□□□□ 0.34
ABCD4-222ENST00000555617 TRIOBPQ9H2D6 2365 aa17.13■□□□□ 0.33
ABCD4-222ENST00000555617 LINC00116Q8NCU8 138 aa17.13■□□□□ 0.33
ABCD4-222ENST00000555617 CAPNS2Q96L46 248 aa17.13■□□□□ 0.33
ABCD4-222ENST00000555617 CYP4F22Q6NT55 531 aa17.12■□□□□ 0.33
ABCD4-222ENST00000555617 BEGAINQ9BUH8 593 aa17.12■□□□□ 0.33
ABCD4-222ENST00000555617 CCDC87Q9NVE4 849 aa17.12■□□□□ 0.33
ABCD4-222ENST00000555617 FAM208AQ9UK61 1670 aaKnown RBP17.11■□□□□ 0.33
ABCD4-222ENST00000555617 NFKBIEO00221 500 aa17.11■□□□□ 0.33
ABCD4-222ENST00000555617 AOC2O75106 756 aa17.11■□□□□ 0.33
ABCD4-222ENST00000555617 GRM1Q13255 1194 aa17.11■□□□□ 0.33
ABCD4-222ENST00000555617 ITGB4P16144 1822 aa17.1■□□□□ 0.33
ABCD4-222ENST00000555617 LDHDQ86WU2 507 aa17.1■□□□□ 0.33
ABCD4-222ENST00000555617 GPR101Q96P66 508 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-222ENST00000555617 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
ABCD4-222ENST00000555617 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
ABCD4-222ENST00000555617 ABT1Q9ULW3 272 aaKnown RBP17.09■□□□□ 0.33
ABCD4-222ENST00000555617 DDNO94850 711 aaPredicted RBP17.08■□□□□ 0.32
ABCD4-222ENST00000555617 NBPF15Q8N660 670 aa17.08■□□□□ 0.32
ABCD4-222ENST00000555617 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
ABCD4-222ENST00000555617 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
ABCD4-222ENST00000555617 SCN4AP35499 1836 aa17.07■□□□□ 0.32
ABCD4-222ENST00000555617 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
ABCD4-222ENST00000555617 GNPATO15228 680 aa17.06■□□□□ 0.32
ABCD4-222ENST00000555617 MPNDQ8N594 471 aa17.05■□□□□ 0.32
ABCD4-222ENST00000555617 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
ABCD4-222ENST00000555617 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
ABCD4-222ENST00000555617 PAXIP1Q6ZW49 1069 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-222ENST00000555617 TAF1DQ9H5J8 278 aaPredicted RBP17.04■□□□□ 0.32
ABCD4-222ENST00000555617 TMF1P82094 1093 aa17.03■□□□□ 0.32
ABCD4-222ENST00000555617 GYS1P13807 737 aa17.02■□□□□ 0.32
ABCD4-222ENST00000555617 APLP2Q06481 763 aa17.02■□□□□ 0.32
ABCD4-222ENST00000555617 ITPK1Q13572 414 aa17.02■□□□□ 0.32
ABCD4-222ENST00000555617 MAP1SQ66K74 1059 aaPredicted RBP17.02■□□□□ 0.32
ABCD4-222ENST00000555617 FER1L6Q2WGJ9 1857 aa17.01■□□□□ 0.31
ABCD4-222ENST00000555617 DDR1Q08345 913 aa17■□□□□ 0.31
ABCD4-222ENST00000555617 NLGN1Q8N2Q7 840 aa17■□□□□ 0.31
ABCD4-222ENST00000555617 PARP3Q9Y6F1 533 aa17■□□□□ 0.31
ABCD4-222ENST00000555617 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
ABCD4-222ENST00000555617 EAPPQ56P03 285 aaPredicted RBP16.99■□□□□ 0.31
ABCD4-222ENST00000555617 CABP2Q9NPB3 220 aa16.99■□□□□ 0.31
ABCD4-222ENST00000555617 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
ABCD4-222ENST00000555617 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
ABCD4-222ENST00000555617 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
ABCD4-222ENST00000555617 TTC21BQ7Z4L5 1316 aa16.97■□□□□ 0.31
ABCD4-222ENST00000555617 ECE1P42892 770 aa16.97■□□□□ 0.31
ABCD4-222ENST00000555617 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
ABCD4-222ENST00000555617 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
ABCD4-222ENST00000555617 CA12O43570 354 aa16.96■□□□□ 0.31
ABCD4-222ENST00000555617 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
ABCD4-222ENST00000555617 COLQQ9Y215 455 aaPredicted RBP16.96■□□□□ 0.31
ABCD4-222ENST00000555617 SCN11AQ9UI33 1791 aa16.96■□□□□ 0.31
ABCD4-222ENST00000555617 CEP290O15078 2479 aa16.95■□□□□ 0.3
ABCD4-222ENST00000555617 MAP2K2P36507 400 aa16.95■□□□□ 0.3
ABCD4-222ENST00000555617 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
ABCD4-222ENST00000555617 DDX21Q9NR30 783 aaKnown RBP eCLIP16.95■□□□□ 0.3
ABCD4-222ENST00000555617 AFDNP55196 1824 aaKnown RBP16.95■□□□□ 0.3
ABCD4-222ENST00000555617 UNC80Q8N2C7 3258 aa16.95■□□□□ 0.3
ABCD4-222ENST00000555617 ARHGEF1Q92888 912 aaKnown RBP16.94■□□□□ 0.3
ABCD4-222ENST00000555617 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
ABCD4-222ENST00000555617 SIK1P57059 783 aa16.93■□□□□ 0.3
ABCD4-222ENST00000555617 CST9Q5W186 159 aa16.93■□□□□ 0.3
ABCD4-222ENST00000555617 CIAPIN1Q6FI81 312 aa16.93■□□□□ 0.3
ABCD4-222ENST00000555617 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
ABCD4-222ENST00000555617 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
ABCD4-222ENST00000555617 CLEC11AQ9Y240 323 aa16.93■□□□□ 0.3
ABCD4-222ENST00000555617 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
ABCD4-222ENST00000555617 RANBP2P49792 3224 aaKnown RBP16.91■□□□□ 0.3
ABCD4-222ENST00000555617 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-222ENST00000555617 BRPF1P55201 1214 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-222ENST00000555617 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
ABCD4-222ENST00000555617 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-222ENST00000555617 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
ABCD4-222ENST00000555617 TRAPPC3LQ5T215 181 aa16.9■□□□□ 0.3
ABCD4-222ENST00000555617 BRCA2P51587 3418 aa16.9■□□□□ 0.3
ABCD4-222ENST00000555617 IQCA1LA6NCM1 817 aa16.89■□□□□ 0.29
ABCD4-222ENST00000555617 PIGBQ92521 554 aa16.89■□□□□ 0.29
ABCD4-222ENST00000555617 TLL2Q9Y6L7 1015 aa16.89■□□□□ 0.29
ABCD4-222ENST00000555617 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
ABCD4-222ENST00000555617 FKBP8Q14318 412 aa16.88■□□□□ 0.29
ABCD4-222ENST00000555617 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
ABCD4-222ENST00000555617 TRAF5O00463 557 aa16.87■□□□□ 0.29
ABCD4-222ENST00000555617 COL25A1Q9BXS0 654 aaPredicted RBP16.87■□□□□ 0.29
ABCD4-222ENST00000555617 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
ABCD4-222ENST00000555617 EPHX2P34913 555 aa16.86■□□□□ 0.29
ABCD4-222ENST00000555617 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
ABCD4-222ENST00000555617 POLRMTO00411 1230 aaKnown RBP16.85■□□□□ 0.29
ABCD4-222ENST00000555617 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
ABCD4-222ENST00000555617 ZNF541Q9H0D2 1346 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms