RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 MSH5O43196 834 aa13.49□□□□□ -0.25
HNRNPC-219ENST00000555309 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-219ENST00000555309 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
HNRNPC-219ENST00000555309 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-219ENST00000555309 ERVV-2B6SEH9 535 aa13.48□□□□□ -0.25
HNRNPC-219ENST00000555309 CABP4P57796 275 aa13.48□□□□□ -0.25
HNRNPC-219ENST00000555309 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
HNRNPC-219ENST00000555309 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
HNRNPC-219ENST00000555309 C5P01031 1676 aa13.48□□□□□ -0.25
HNRNPC-219ENST00000555309 TAF1LQ8IZX4 1826 aa13.48□□□□□ -0.25
HNRNPC-219ENST00000555309 ATP6V1AP38606 617 aa13.47□□□□□ -0.25
HNRNPC-219ENST00000555309 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-219ENST00000555309 GOLGB1Q14789 3259 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-219ENST00000555309 PHF14O94880 888 aa13.47□□□□□ -0.25
HNRNPC-219ENST00000555309 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
HNRNPC-219ENST00000555309 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
HNRNPC-219ENST00000555309 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.25
HNRNPC-219ENST00000555309 PTCD1O75127 700 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-219ENST00000555309 HSP90AB1P08238 724 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-219ENST00000555309 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
HNRNPC-219ENST00000555309 ARXQ96QS3 562 aa13.45□□□□□ -0.26
HNRNPC-219ENST00000555309 C4BP0C0L5 1744 aa13.45□□□□□ -0.26
HNRNPC-219ENST00000555309 RNMTO43148 476 aaKnown RBP13.44□□□□□ -0.26
HNRNPC-219ENST00000555309 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
HNRNPC-219ENST00000555309 SYT17Q9BSW7 474 aa13.44□□□□□ -0.26
HNRNPC-219ENST00000555309 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
HNRNPC-219ENST00000555309 AK7Q96M32 723 aa13.44□□□□□ -0.26
HNRNPC-219ENST00000555309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.43□□□□□ -0.26
HNRNPC-219ENST00000555309 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
HNRNPC-219ENST00000555309 SLC16A10Q8TF71 515 aa13.43□□□□□ -0.26
HNRNPC-219ENST00000555309 RSPH6AQ9H0K4 717 aa13.43□□□□□ -0.26
HNRNPC-219ENST00000555309 SLC52A2Q9HAB3 445 aa13.43□□□□□ -0.26
HNRNPC-219ENST00000555309 GNPATO15228 680 aa13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.266e-11■■□□□ 14.2
HNRNPC-219ENST00000555309 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 SCN11AQ9UI33 1791 aa13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
HNRNPC-219ENST00000555309 UBR3Q6ZT12 1888 aa13.41□□□□□ -0.26
HNRNPC-219ENST00000555309 NLGN2Q8NFZ4 835 aa13.4□□□□□ -0.26
HNRNPC-219ENST00000555309 COL24A1Q17RW2 1714 aa13.39□□□□□ -0.27
HNRNPC-219ENST00000555309 MYH14Q7Z406 1995 aaKnown RBP13.39□□□□□ -0.27
HNRNPC-219ENST00000555309 POLD1P28340 1107 aa13.39□□□□□ -0.27
HNRNPC-219ENST00000555309 DNAJC10Q8IXB1 793 aa13.39□□□□□ -0.27
HNRNPC-219ENST00000555309 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
HNRNPC-219ENST00000555309 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
HNRNPC-219ENST00000555309 GNAT3A8MTJ3 354 aa13.38□□□□□ -0.27
HNRNPC-219ENST00000555309 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
HNRNPC-219ENST00000555309 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
HNRNPC-219ENST00000555309 GTF3C3Q9Y5Q9 886 aa13.38□□□□□ -0.27
HNRNPC-219ENST00000555309 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 KCNQ3O43525 872 aa13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 SSFA2P28290 1259 aa13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 CRKLP46109 303 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 ARHGEF1Q92888 912 aaKnown RBP13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 MRC1P22897 1456 aa13.37□□□□□ -0.27
HNRNPC-219ENST00000555309 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 MCM10Q7L590 875 aa13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 GAS2L2Q8NHY3 880 aa13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 TJP1Q07157 1748 aa13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 FCHSD2O94868 740 aa13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 RTCBQ9Y3I0 505 aaKnown RBP13.36□□□□□ -0.27
HNRNPC-219ENST00000555309 KCPQ6ZWJ8 1503 aa13.35□□□□□ -0.27
HNRNPC-219ENST00000555309 CNTNAP4Q9C0A0 1308 aa13.35□□□□□ -0.27
HNRNPC-219ENST00000555309 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
HNRNPC-219ENST00000555309 RC3H1Q5TC82 1133 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-219ENST00000555309 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
HNRNPC-219ENST00000555309 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
HNRNPC-219ENST00000555309 ZNF831Q5JPB2 1677 aa13.33□□□□□ -0.27
HNRNPC-219ENST00000555309 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-219ENST00000555309 TEFQ10587 303 aa13.33□□□□□ -0.27
HNRNPC-219ENST00000555309 ZNF496Q96IT1 587 aaPredicted RBP13.33□□□□□ -0.27
HNRNPC-219ENST00000555309 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.27
HNRNPC-219ENST00000555309 CEMIPQ8WUJ3 1361 aa13.33□□□□□ -0.28
HNRNPC-219ENST00000555309 GYS1P13807 737 aa13.33□□□□□ -0.28
HNRNPC-219ENST00000555309 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
HNRNPC-219ENST00000555309 MMP10P09238 476 aa13.32□□□□□ -0.28
HNRNPC-219ENST00000555309 ZNF790Q6PG37 636 aa13.32□□□□□ -0.28
HNRNPC-219ENST00000555309 MIS18AQ9NYP9 233 aa13.32□□□□□ -0.28
HNRNPC-219ENST00000555309 ZBTB1Q9Y2K1 713 aa13.32□□□□□ -0.28
HNRNPC-219ENST00000555309 RFC4P35249 363 aa13.31□□□□□ -0.28
HNRNPC-219ENST00000555309 RALBP1Q15311 655 aa13.31□□□□□ -0.28
HNRNPC-219ENST00000555309 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-219ENST00000555309 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
HNRNPC-219ENST00000555309 SIPA1L3O60292 1781 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-219ENST00000555309 YBX3P16989 372 aaKnown RBP eCLIP13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 FKBP8Q14318 412 aa13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 CANXP27824 592 aaKnown RBP13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 GPR162Q16538 588 aa13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
HNRNPC-219ENST00000555309 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
HNRNPC-219ENST00000555309 YY1P25490 414 aa13.29□□□□□ -0.28
HNRNPC-219ENST00000555309 PIP4K2AP48426 406 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms