RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 PARP4Q9UKK3 1724 aaKnown RBP30.72■■■□□ 2.51
RCCD1-203ENST00000555155 FTSJ3Q8IY81 847 aaKnown RBP30.72■■■□□ 2.51
RCCD1-203ENST00000555155 PELP1Q8IZL8 1130 aaKnown RBP30.72■■■□□ 2.51
RCCD1-203ENST00000555155 SPG7Q9UQ90 795 aa30.72■■■□□ 2.51
RCCD1-203ENST00000555155 KIF16BQ96L93 1317 aa30.72■■■□□ 2.51
RCCD1-203ENST00000555155 RNMTO43148 476 aaKnown RBP30.72■■■□□ 2.51
RCCD1-203ENST00000555155 PLEKHG2Q9H7P9 1386 aa30.71■■■□□ 2.51
RCCD1-203ENST00000555155 PKD1L3Q7Z443 1732 aa30.7■■■□□ 2.51
RCCD1-203ENST00000555155 TEFQ10587 303 aa30.7■■■□□ 2.51
RCCD1-203ENST00000555155 ATF7IPQ6VMQ6 1270 aa30.7■■■□□ 2.51
RCCD1-203ENST00000555155 DZIP1LQ8IYY4 767 aaKnown RBP30.7■■■□□ 2.51
RCCD1-203ENST00000555155 ZCRB1Q8TBF4 217 aaKnown RBP30.7■■■□□ 2.5
RCCD1-203ENST00000555155 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.69■■■□□ 2.5
RCCD1-203ENST00000555155 CYP27B1O15528 508 aa30.69■■■□□ 2.5
RCCD1-203ENST00000555155 THRAP3Q9Y2W1 955 aaKnown RBP30.69■■■□□ 2.5
RCCD1-203ENST00000555155 PHKG2P15735 406 aa30.67■■■□□ 2.5
RCCD1-203ENST00000555155 IPO8O15397 1037 aaKnown RBP30.66■■■□□ 2.5
RCCD1-203ENST00000555155 KDM3BQ7LBC6 1761 aa30.65■■■□□ 2.5
RCCD1-203ENST00000555155 WNK3Q9BYP7 1800 aa30.65■■■□□ 2.5
RCCD1-203ENST00000555155 BRPF1P55201 1214 aaPredicted RBP30.64■■■□□ 2.5
RCCD1-203ENST00000555155 IFNL2Q8IZJ0 200 aa30.64■■■□□ 2.5
RCCD1-203ENST00000555155 BTBD11A6QL63 1104 aa30.63■■■□□ 2.49
RCCD1-203ENST00000555155 KDM6AO15550 1401 aaPredicted RBP30.63■■■□□ 2.49
RCCD1-203ENST00000555155 KCNQ3O43525 872 aa30.63■■■□□ 2.49
RCCD1-203ENST00000555155 FAM98CQ17RN3 349 aaKnown RBP30.63■■■□□ 2.49
RCCD1-203ENST00000555155 BARGINQ6ZT62 677 aa30.63■■■□□ 2.49
RCCD1-203ENST00000555155 BABAM1Q9NWV8 329 aa30.63■■■□□ 2.49
RCCD1-203ENST00000555155 MVPQ14764 893 aaKnown RBP30.63■■■□□ 2.49
RCCD1-203ENST00000555155 DDX54Q8TDD1 881 aaKnown RBP30.63■■■□□ 2.49
RCCD1-203ENST00000555155 ADAMTS7Q9UKP4 1686 aa30.63■■■□□ 2.49
RCCD1-203ENST00000555155 SCN11AQ9UI33 1791 aa30.63■■■□□ 2.49
RCCD1-203ENST00000555155 SHANK3Q9BYB0 1731 aa30.62■■■□□ 2.49
RCCD1-203ENST00000555155 PCDH11XQ9BZA7 1347 aa30.62■■■□□ 2.49
RCCD1-203ENST00000555155 PCDH11YQ9BZA8 1340 aa30.62■■■□□ 2.49
RCCD1-203ENST00000555155 MS4A1P11836 297 aa30.62■■■□□ 2.49
RCCD1-203ENST00000555155 SIPA1L3O60292 1781 aaPredicted RBP30.62■■■□□ 2.49
RCCD1-203ENST00000555155 ATRNO75882 1429 aa30.62■■■□□ 2.49
RCCD1-203ENST00000555155 ITPRIPQ8IWB1 547 aa30.61■■■□□ 2.49
RCCD1-203ENST00000555155 TMEM57Q8N5G2 664 aa30.61■■■□□ 2.49
RCCD1-203ENST00000555155 NECTIN2Q92692 538 aa30.61■■■□□ 2.49
RCCD1-203ENST00000555155 GJD4Q96KN9 370 aaPredicted RBP30.6■■■□□ 2.49
RCCD1-203ENST00000555155 CDCA7Q9BWT1 371 aaPredicted RBP30.6■■■□□ 2.49
RCCD1-203ENST00000555155 TRPC5Q9UL62 973 aaPredicted RBP30.6■■■□□ 2.49
RCCD1-203ENST00000555155 QTRT2Q9H974 415 aaKnown RBP30.59■■■□□ 2.49
RCCD1-203ENST00000555155 EXOC5O00471 708 aa30.58■■■□□ 2.49
RCCD1-203ENST00000555155 GLI3P10071 1580 aa30.58■■■□□ 2.49
RCCD1-203ENST00000555155 EIF4A1P60842 406 aaKnown RBP30.57■■■□□ 2.48
RCCD1-203ENST00000555155 TNS2Q63HR2 1409 aa30.56■■■□□ 2.48
RCCD1-203ENST00000555155 SLC4A2P04920 1241 aa30.56■■■□□ 2.48
RCCD1-203ENST00000555155 DDB1Q16531 1140 aa30.55■■■□□ 2.48
RCCD1-203ENST00000555155 ARHGAP45Q92619 1136 aa30.55■■■□□ 2.48
RCCD1-203ENST00000555155 DCAF5Q96JK2 942 aa30.54■■■□□ 2.48
RCCD1-203ENST00000555155 NFATC2IPQ8NCF5 419 aa30.53■■■□□ 2.48
RCCD1-203ENST00000555155 SLC52A2Q9HAB3 445 aa30.53■■■□□ 2.48
RCCD1-203ENST00000555155 HSP90AB1P08238 724 aaKnown RBP30.52■■■□□ 2.48
RCCD1-203ENST00000555155 NKX1-1Q15270 411 aaPredicted RBP30.51■■■□□ 2.47
RCCD1-203ENST00000555155 G2E3Q7L622 706 aa30.51■■■□□ 2.47
RCCD1-203ENST00000555155 A0A0G2JS52 829 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 MYT1Q01538 1121 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 SLC39A6Q13433 755 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 STK31Q9BXU1 1019 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 API5Q9BZZ5 524 aaKnown RBP30.5■■■□□ 2.47
RCCD1-203ENST00000555155 DDX19BQ9UMR2 479 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 ABCC4O15439 1325 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 KDM2BQ8NHM5 1336 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 CCDC30Q5VVM6 783 aa30.5■■■□□ 2.47
RCCD1-203ENST00000555155 EIF2S2P20042 333 aaKnown RBP30.49■■■□□ 2.47
RCCD1-203ENST00000555155 HDGFL1Q5TGJ6 251 aa30.49■■■□□ 2.47
RCCD1-203ENST00000555155 ZNF772Q68DY9 489 aaPredicted RBP30.49■■■□□ 2.47
RCCD1-203ENST00000555155 PCDHB15Q9Y5E8 787 aa30.48■■■□□ 2.47
RCCD1-203ENST00000555155 RGS12O14924 1447 aa30.48■■■□□ 2.47
RCCD1-203ENST00000555155 THSD7AQ9UPZ6 1657 aa30.47■■■□□ 2.47
RCCD1-203ENST00000555155 MARCH10Q8NA82 808 aaPredicted RBP30.47■■■□□ 2.47
RCCD1-203ENST00000555155 MRC1P22897 1456 aa30.47■■■□□ 2.47
RCCD1-203ENST00000555155 IGHDP01880 384 aa30.46■■■□□ 2.47
RCCD1-203ENST00000555155 SOS1Q07889 1333 aaPredicted RBP30.46■■■□□ 2.47
RCCD1-203ENST00000555155 SKAP1Q86WV1 359 aa30.46■■■□□ 2.47
RCCD1-203ENST00000555155 ONECUT3O60422 494 aaPredicted RBP30.45■■■□□ 2.47
RCCD1-203ENST00000555155 CABP4P57796 275 aa30.45■■■□□ 2.47
RCCD1-203ENST00000555155 CENPQQ7L2Z9 268 aaPredicted RBP30.45■■■□□ 2.47
RCCD1-203ENST00000555155 PRAMEF22A3QJZ6 481 aa30.44■■■□□ 2.46
RCCD1-203ENST00000555155 ILDR1Q86SU0 546 aaPredicted RBP30.44■■■□□ 2.46
RCCD1-203ENST00000555155 RGS17Q9UGC6 210 aaPredicted RBP30.44■■■□□ 2.46
RCCD1-203ENST00000555155 PTPRCP08575 1304 aa30.44■■■□□ 2.46
RCCD1-203ENST00000555155 AAMPQ13685 434 aa30.43■■■□□ 2.46
RCCD1-203ENST00000555155 ZNF790Q6PG37 636 aa30.43■■■□□ 2.46
RCCD1-203ENST00000555155 TOGARAM1Q9Y4F4 1720 aa30.42■■■□□ 2.46
RCCD1-203ENST00000555155 SEPT12Q8IYM1 358 aa30.41■■■□□ 2.46
RCCD1-203ENST00000555155 ERVV-2B6SEH9 535 aa30.4■■■□□ 2.46
RCCD1-203ENST00000555155 F6X3S4 739 aa30.4■■■□□ 2.46
RCCD1-203ENST00000555155 GIGYF1O75420 1035 aaPredicted RBP30.4■■■□□ 2.46
RCCD1-203ENST00000555155 FLIIQ13045 1269 aa30.4■■■□□ 2.46
RCCD1-203ENST00000555155 HOXB7P09629 217 aa30.4■■■□□ 2.46
RCCD1-203ENST00000555155 ZBTB40Q9NUA8 1239 aa30.4■■■□□ 2.46
RCCD1-203ENST00000555155 CHPF2Q9P2E5 772 aa30.4■■■□□ 2.46
RCCD1-203ENST00000555155 CACNA1FO60840 1977 aa30.39■■■□□ 2.46
RCCD1-203ENST00000555155 C5P01031 1676 aa30.39■■■□□ 2.46
RCCD1-203ENST00000555155 HEG1Q9ULI3 1381 aa30.39■■■□□ 2.45
RCCD1-203ENST00000555155 ANXA1P04083 346 aa30.38■■■□□ 2.45
RCCD1-203ENST00000555155 RBM6P78332 1123 aaKnown RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms