RNA–Protein interactions for RNA: ENST00000555088.5

GSKIP-204, Transcript of GSK3B interacting protein, humanhuman

TSL 5

Gene GSKIP, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSKIP-204ENST00000555088 RIPK4P57078 832 aa16.53■□□□□ 0.24
GSKIP-204ENST00000555088 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
GSKIP-204ENST00000555088 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
GSKIP-204ENST00000555088 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
GSKIP-204ENST00000555088 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
GSKIP-204ENST00000555088 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
GSKIP-204ENST00000555088 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
GSKIP-204ENST00000555088 ERVV-2B6SEH9 535 aa16.5■□□□□ 0.23
GSKIP-204ENST00000555088 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
GSKIP-204ENST00000555088 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
GSKIP-204ENST00000555088 FAM196AQ6ZSG2 479 aa16.49■□□□□ 0.23
GSKIP-204ENST00000555088 TRIM35Q9UPQ4 493 aa16.49■□□□□ 0.23
GSKIP-204ENST00000555088 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
GSKIP-204ENST00000555088 IL17REQ8NFR9 667 aa16.48■□□□□ 0.23
GSKIP-204ENST00000555088 RRP7AQ9Y3A4 280 aaKnown RBP16.48■□□□□ 0.23
GSKIP-204ENST00000555088 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
GSKIP-204ENST00000555088 RNMTO43148 476 aaKnown RBP16.47■□□□□ 0.23
GSKIP-204ENST00000555088 WWC1Q8IX03 1113 aa16.47■□□□□ 0.23
GSKIP-204ENST00000555088 NEUROD2Q15784 382 aa16.46■□□□□ 0.23
GSKIP-204ENST00000555088 WDR63Q8IWG1 891 aa16.46■□□□□ 0.23
GSKIP-204ENST00000555088 BABAM1Q9NWV8 329 aa16.46■□□□□ 0.23
GSKIP-204ENST00000555088 IL16Q14005 1332 aa16.45■□□□□ 0.22
GSKIP-204ENST00000555088 LGR6Q9HBX8 967 aa16.45■□□□□ 0.22
GSKIP-204ENST00000555088 ZNF521Q96K83 1311 aa16.45■□□□□ 0.22
GSKIP-204ENST00000555088 MRC1P22897 1456 aa16.44■□□□□ 0.22
GSKIP-204ENST00000555088 HNRNPUQ00839 825 aaKnown RBP eCLIP16.44■□□□□ 0.22
GSKIP-204ENST00000555088 TEFQ10587 303 aa16.44■□□□□ 0.22
GSKIP-204ENST00000555088 MCM10Q7L590 875 aa16.44■□□□□ 0.22
GSKIP-204ENST00000555088 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
GSKIP-204ENST00000555088 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
GSKIP-204ENST00000555088 CABP4P57796 275 aa16.43■□□□□ 0.22
GSKIP-204ENST00000555088 ZBED9Q6R2W3 1325 aa16.43■□□□□ 0.22
GSKIP-204ENST00000555088 TAF7Q15545 349 aaPredicted RBP16.42■□□□□ 0.22
GSKIP-204ENST00000555088 BCL11BQ9C0K0 894 aaPredicted RBP16.42■□□□□ 0.22
GSKIP-204ENST00000555088 TMOD3Q9NYL9 352 aa16.42■□□□□ 0.22
GSKIP-204ENST00000555088 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
GSKIP-204ENST00000555088 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
GSKIP-204ENST00000555088 DCTN1Q14203 1278 aa16.41■□□□□ 0.22
GSKIP-204ENST00000555088 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
GSKIP-204ENST00000555088 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
GSKIP-204ENST00000555088 ZNF853P0CG23 659 aa16.4■□□□□ 0.22
GSKIP-204ENST00000555088 GNAI1P63096 354 aa16.4■□□□□ 0.22
GSKIP-204ENST00000555088 NFATC2IPQ8NCF5 419 aa16.4■□□□□ 0.22
GSKIP-204ENST00000555088 CHL1O00533 1208 aa16.39■□□□□ 0.21
GSKIP-204ENST00000555088 FAM182BQ5T319 152 aa16.39■□□□□ 0.21
GSKIP-204ENST00000555088 PIGBQ92521 554 aa16.39■□□□□ 0.21
GSKIP-204ENST00000555088 THUMPD2Q9BTF0 503 aaKnown RBP16.39■□□□□ 0.21
GSKIP-204ENST00000555088 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
GSKIP-204ENST00000555088 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
GSKIP-204ENST00000555088 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
GSKIP-204ENST00000555088 BTBD11A6QL63 1104 aa16.37■□□□□ 0.21
GSKIP-204ENST00000555088 E9PSI1 815 aa16.37■□□□□ 0.21
GSKIP-204ENST00000555088 CCDC125Q86Z20 511 aa16.37■□□□□ 0.21
GSKIP-204ENST00000555088 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
GSKIP-204ENST00000555088 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
GSKIP-204ENST00000555088 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
GSKIP-204ENST00000555088 KCNQ2O43526 872 aa16.36■□□□□ 0.21
GSKIP-204ENST00000555088 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
GSKIP-204ENST00000555088 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
GSKIP-204ENST00000555088 TRIM37O94972 964 aa16.34■□□□□ 0.21
GSKIP-204ENST00000555088 HMGB2P26583 209 aaKnown RBP16.34■□□□□ 0.21
GSKIP-204ENST00000555088 TTC5Q8N0Z6 440 aa16.34■□□□□ 0.21
GSKIP-204ENST00000555088 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
GSKIP-204ENST00000555088 GABBR2O75899 941 aa16.33■□□□□ 0.2
GSKIP-204ENST00000555088 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
GSKIP-204ENST00000555088 TRMT2AQ8IZ69 625 aaKnown RBP16.33■□□□□ 0.2
GSKIP-204ENST00000555088 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
GSKIP-204ENST00000555088 PLSCR1O15162 318 aa16.32■□□□□ 0.2
GSKIP-204ENST00000555088 SOS1Q07889 1333 aaPredicted RBP16.32■□□□□ 0.2
GSKIP-204ENST00000555088 NHSQ6T4R5 1651 aa16.32■□□□□ 0.2
GSKIP-204ENST00000555088 VSIG10Q8N0Z9 540 aa16.32■□□□□ 0.2
GSKIP-204ENST00000555088 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
GSKIP-204ENST00000555088 TOGARAM1Q9Y4F4 1720 aa16.31■□□□□ 0.2
GSKIP-204ENST00000555088 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
GSKIP-204ENST00000555088 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
GSKIP-204ENST00000555088 ASAP1Q9ULH1 1129 aa16.31■□□□□ 0.2
GSKIP-204ENST00000555088 LAS1LQ9Y4W2 734 aaKnown RBP16.31■□□□□ 0.2
GSKIP-204ENST00000555088 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 FANCIQ9NVI1 1328 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 HOXB7P09629 217 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
GSKIP-204ENST00000555088 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 MIS18AQ9NYP9 233 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
GSKIP-204ENST00000555088 BRWD3Q6RI45 1802 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 SCN11AQ9UI33 1791 aa16.3■□□□□ 0.2
GSKIP-204ENST00000555088 DOT1LQ8TEK3 1739 aa16.29■□□□□ 0.2
GSKIP-204ENST00000555088 SLC39A6Q13433 755 aa16.29■□□□□ 0.2
GSKIP-204ENST00000555088 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
GSKIP-204ENST00000555088 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
GSKIP-204ENST00000555088 APBA3O96018 575 aa16.28■□□□□ 0.2
GSKIP-204ENST00000555088 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
GSKIP-204ENST00000555088 ZNF496Q96IT1 587 aaPredicted RBP16.28■□□□□ 0.2
GSKIP-204ENST00000555088 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
GSKIP-204ENST00000555088 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
GSKIP-204ENST00000555088 SNRPA1P09661 255 aaKnown RBP16.27■□□□□ 0.2
GSKIP-204ENST00000555088 CT47B1P0C2W7 299 aaPredicted RBP16.27■□□□□ 0.2
GSKIP-204ENST00000555088 SIK1P57059 783 aa16.27■□□□□ 0.2
GSKIP-204ENST00000555088 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms