RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 MPNDQ8N594 471 aa18.92■□□□□ 0.62
SYNE3-203ENST00000554873 ZDHHC9Q9Y397 364 aa18.92■□□□□ 0.62
SYNE3-203ENST00000554873 SYCP1Q15431 976 aa18.91■□□□□ 0.62
SYNE3-203ENST00000554873 TULP2O00295 520 aa18.91■□□□□ 0.62
SYNE3-203ENST00000554873 DDX41Q9UJV9 622 aaKnown RBP18.91■□□□□ 0.62
SYNE3-203ENST00000554873 ATP7BP35670 1465 aa18.91■□□□□ 0.62
SYNE3-203ENST00000554873 TERF2Q15554 542 aa18.9■□□□□ 0.62
SYNE3-203ENST00000554873 TEX2Q8IWB9 1127 aa18.9■□□□□ 0.62
SYNE3-203ENST00000554873 DCTPP1Q9H773 170 aa18.9■□□□□ 0.62
SYNE3-203ENST00000554873 DCTN1Q14203 1278 aa18.9■□□□□ 0.62
SYNE3-203ENST00000554873 CALCOCO1Q9P1Z2 691 aa18.9■□□□□ 0.62
SYNE3-203ENST00000554873 PHF14O94880 888 aa18.89■□□□□ 0.61
SYNE3-203ENST00000554873 C16orf71Q8IYS4 520 aaPredicted RBP18.89■□□□□ 0.61
SYNE3-203ENST00000554873 MORC2Q9Y6X9 1032 aaPredicted RBP18.89■□□□□ 0.61
SYNE3-203ENST00000554873 NCBP1Q09161 790 aaKnown RBP18.88■□□□□ 0.61
SYNE3-203ENST00000554873 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
SYNE3-203ENST00000554873 TSPYL1Q9H0U9 437 aa18.88■□□□□ 0.61
SYNE3-203ENST00000554873 ADCY5O95622 1261 aa18.88■□□□□ 0.61
SYNE3-203ENST00000554873 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
SYNE3-203ENST00000554873 KIAA1524Q8TCG1 905 aa18.88■□□□□ 0.61
SYNE3-203ENST00000554873 USP25Q9UHP3 1055 aa18.88■□□□□ 0.61
SYNE3-203ENST00000554873 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
SYNE3-203ENST00000554873 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
SYNE3-203ENST00000554873 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
SYNE3-203ENST00000554873 ZFP91Q96JP5 570 aaPredicted RBP18.87■□□□□ 0.61
SYNE3-203ENST00000554873 TTC22Q5TAA0 569 aa18.87■□□□□ 0.61
SYNE3-203ENST00000554873 CPSF1Q10570 1443 aaKnown RBP18.86■□□□□ 0.61
SYNE3-203ENST00000554873 ZGPATQ8N5A5 531 aaKnown RBP18.86■□□□□ 0.61
SYNE3-203ENST00000554873 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
SYNE3-203ENST00000554873 CHRM1P11229 460 aaPredicted RBP18.86■□□□□ 0.61
SYNE3-203ENST00000554873 EDC4Q6P2E9 1401 aaKnown RBP18.85■□□□□ 0.61
SYNE3-203ENST00000554873 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 CAPN2P17655 700 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 INTS3Q68E01 1043 aaKnown RBP18.85■□□□□ 0.61
SYNE3-203ENST00000554873 USP26Q9BXU7 913 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 CHMP4AQ9BY43 222 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 KNDC1Q76NI1 1749 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 CDK12Q9NYV4 1490 aaPredicted RBP18.85■□□□□ 0.61
SYNE3-203ENST00000554873 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 AATKQ6ZMQ8 1374 aa18.85■□□□□ 0.61
SYNE3-203ENST00000554873 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
SYNE3-203ENST00000554873 OTUD7AQ8TE49 926 aaPredicted RBP18.84■□□□□ 0.61
SYNE3-203ENST00000554873 REREQ9P2R6 1566 aa18.84■□□□□ 0.61
SYNE3-203ENST00000554873 FAM193AP78312 1265 aa18.84■□□□□ 0.61
SYNE3-203ENST00000554873 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
SYNE3-203ENST00000554873 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
SYNE3-203ENST00000554873 NCKAP5LQ9HCH0 1330 aa18.84■□□□□ 0.61
SYNE3-203ENST00000554873 TPM3P06753 285 aa18.83■□□□□ 0.61
SYNE3-203ENST00000554873 ANKRD44Q8N8A2 993 aa18.83■□□□□ 0.61
SYNE3-203ENST00000554873 RGS22Q8NE09 1264 aa18.83■□□□□ 0.61
SYNE3-203ENST00000554873 COG3Q96JB2 828 aa18.83■□□□□ 0.61
SYNE3-203ENST00000554873 ST18O60284 1047 aa18.83■□□□□ 0.6
SYNE3-203ENST00000554873 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
SYNE3-203ENST00000554873 KRT222Q8N1A0 295 aa18.82■□□□□ 0.6
SYNE3-203ENST00000554873 KIF18AQ8NI77 898 aa18.82■□□□□ 0.6
SYNE3-203ENST00000554873 TRIM6-TRIM34B2RNG4 842 aa18.81■□□□□ 0.6
SYNE3-203ENST00000554873 TRIM34Q9BYJ4 488 aa18.81■□□□□ 0.6
SYNE3-203ENST00000554873 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
SYNE3-203ENST00000554873 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
SYNE3-203ENST00000554873 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
SYNE3-203ENST00000554873 PYCARDQ9ULZ3 195 aa18.8■□□□□ 0.6
SYNE3-203ENST00000554873 SMARCA5O60264 1052 aaPredicted RBP18.8■□□□□ 0.6
SYNE3-203ENST00000554873 SDSP20132 328 aa18.8■□□□□ 0.6
SYNE3-203ENST00000554873 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
SYNE3-203ENST00000554873 ATP10DQ9P241 1426 aa18.79■□□□□ 0.6
SYNE3-203ENST00000554873 AEBP1Q8IUX7 1158 aa18.79■□□□□ 0.6
SYNE3-203ENST00000554873 CPS1P31327 1500 aa18.79■□□□□ 0.6
SYNE3-203ENST00000554873 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 APBB1O00213 710 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 KDM4AO75164 1064 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 TXNDC2Q86VQ3 553 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 KCNF1Q9H3M0 494 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 RGS12O14924 1447 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 SMTNL1A8MU46 457 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 CHL1O00533 1208 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
SYNE3-203ENST00000554873 BRD1O95696 1058 aa18.77■□□□□ 0.59
SYNE3-203ENST00000554873 FOXD4L5Q5VV16 416 aaPredicted RBP18.77■□□□□ 0.59
SYNE3-203ENST00000554873 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.59
SYNE3-203ENST00000554873 FOXD4L4Q8WXT5 416 aaPredicted RBP18.77■□□□□ 0.59
SYNE3-203ENST00000554873 ERICH4A6NGS2 130 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 MCM10Q7L590 875 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 MEIS3Q99687 375 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 RIMBP3CA6NJZ7 1639 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 RIMBP3BA6NNM3 1639 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 RIMBP3Q9UFD9 1639 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 RTL1A6NKG5 1358 aa18.76■□□□□ 0.59
SYNE3-203ENST00000554873 EIF4A2Q14240 407 aaKnown RBP18.75■□□□□ 0.59
SYNE3-203ENST00000554873 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
SYNE3-203ENST00000554873 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
SYNE3-203ENST00000554873 METP08581 1390 aa18.75■□□□□ 0.59
SYNE3-203ENST00000554873 SECISBP2LQ93073 1101 aaKnown RBP18.75■□□□□ 0.59
SYNE3-203ENST00000554873 GOLGA6L6A8MZA4 724 aa18.74■□□□□ 0.59
SYNE3-203ENST00000554873 MSH6P52701 1360 aa18.74■□□□□ 0.59
SYNE3-203ENST00000554873 FAM53CQ9NYF3 392 aa18.74■□□□□ 0.59
SYNE3-203ENST00000554873 FEZ2Q9UHY8 353 aaPredicted RBP18.74■□□□□ 0.59
SYNE3-203ENST00000554873 HCLS1P14317 486 aaPredicted RBP18.73■□□□□ 0.59
SYNE3-203ENST00000554873 HAP1P54257 671 aaPredicted RBP18.73■□□□□ 0.59
SYNE3-203ENST00000554873 CCDC183Q5T5S1 534 aa18.73■□□□□ 0.59
SYNE3-203ENST00000554873 CASC1Q6TDU7 716 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms