RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 MAPK8IP3Q9UPT6 1336 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 NUP98P52948 1817 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 PDE3BQ13370 1112 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 IFT57Q9NWB7 429 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 AFDNP55196 1824 aaKnown RBP8.91□□□□□ -0.98
LINC00517-202ENST00000554257 CSB-PGBD3P0DP91 1061 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 ZNF530Q6P9A1 599 aaPredicted RBP8.91□□□□□ -0.98
LINC00517-202ENST00000554257 BABAM1Q9NWV8 329 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 SPG7Q9UQ90 795 aa8.91□□□□□ -0.98
LINC00517-202ENST00000554257 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
LINC00517-202ENST00000554257 IFNL2Q8IZJ0 200 aa8.9□□□□□ -0.98
LINC00517-202ENST00000554257 RAPGEF4Q8WZA2 1011 aa8.9□□□□□ -0.98
LINC00517-202ENST00000554257 CFAP44Q96MT7 982 aa8.9□□□□□ -0.98
LINC00517-202ENST00000554257 QTRT2Q9H974 415 aaKnown RBP8.9□□□□□ -0.98
LINC00517-202ENST00000554257 ZNF772Q68DY9 489 aaPredicted RBP8.9□□□□□ -0.98
LINC00517-202ENST00000554257 MBIPQ9NS73 344 aa8.9□□□□□ -0.98
LINC00517-202ENST00000554257 LAMB2P55268 1798 aa8.9□□□□□ -0.98
LINC00517-202ENST00000554257 DCAF5Q96JK2 942 aa8.9□□□□□ -0.99
LINC00517-202ENST00000554257 SLC52A2Q9HAB3 445 aa8.9□□□□□ -0.99
LINC00517-202ENST00000554257 ERVV-2B6SEH9 535 aa8.89□□□□□ -0.99
LINC00517-202ENST00000554257 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
LINC00517-202ENST00000554257 MPRIPQ6WCQ1 1025 aa8.89□□□□□ -0.99
LINC00517-202ENST00000554257 GOLGA2Q08379 1002 aa8.88□□□□□ -0.99
LINC00517-202ENST00000554257 LMOD3Q0VAK6 560 aa8.88□□□□□ -0.99
LINC00517-202ENST00000554257 E9PSI1 815 aa8.88□□□□□ -0.99
LINC00517-202ENST00000554257 RBM6P78332 1123 aaKnown RBP8.88□□□□□ -0.99
LINC00517-202ENST00000554257 PTF1AQ7RTS3 328 aa8.88□□□□□ -0.99
LINC00517-202ENST00000554257 USP35Q9P2H5 1018 aa8.88□□□□□ -0.99
LINC00517-202ENST00000554257 KCNQ3O43525 872 aa8.88□□□□□ -0.99
LINC00517-202ENST00000554257 YTHDC1Q96MU7 727 aaKnown RBP8.88□□□□□ -0.99
LINC00517-202ENST00000554257 SEPT12Q8IYM1 358 aa8.87□□□□□ -0.99
LINC00517-202ENST00000554257 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
LINC00517-202ENST00000554257 DDB1Q16531 1140 aa8.87□□□□□ -0.99
LINC00517-202ENST00000554257 LRP10Q7Z4F1 713 aa8.87□□□□□ -0.99
LINC00517-202ENST00000554257 TSR2Q969E8 191 aaKnown RBP8.87□□□□□ -0.99
LINC00517-202ENST00000554257 SLC4A9Q96Q91 983 aa8.87□□□□□ -0.99
LINC00517-202ENST00000554257 NRXN2Q9P2S2 1712 aa8.86□□□□□ -0.99
LINC00517-202ENST00000554257 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
LINC00517-202ENST00000554257 TSPYL6Q8N831 410 aa8.86□□□□□ -0.99
LINC00517-202ENST00000554257 PIGBQ92521 554 aa8.86□□□□□ -0.99
LINC00517-202ENST00000554257 DDX60Q8IY21 1712 aaKnown RBP8.86□□□□□ -0.99
LINC00517-202ENST00000554257 TAF7Q15545 349 aaPredicted RBP8.86□□□□□ -0.99
LINC00517-202ENST00000554257 EXOC5O00471 708 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 HSP90AB1P08238 724 aaKnown RBP8.85□□□□□ -0.99
LINC00517-202ENST00000554257 BRPF1P55201 1214 aaPredicted RBP8.85□□□□□ -0.99
LINC00517-202ENST00000554257 C8orf58Q8NAV2 365 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 A0A1B0GUL6 1792 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 KRT24Q2M2I5 525 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 SALL2Q9Y467 1007 aaPredicted RBP8.85□□□□□ -0.99
LINC00517-202ENST00000554257 VAMP4O75379 141 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 GNAI1P63096 354 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 C1orf141Q5JVX7 400 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 NFATC2IPQ8NCF5 419 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
LINC00517-202ENST00000554257 MIS18AQ9NYP9 233 aa8.84□□□□□ -0.99
LINC00517-202ENST00000554257 KCNQ2O43526 872 aa8.84□□□□□ -1
LINC00517-202ENST00000554257 MYH3P11055 1940 aa8.83□□□□□ -1
LINC00517-202ENST00000554257 SOS1Q07889 1333 aaPredicted RBP8.83□□□□□ -1
LINC00517-202ENST00000554257 PRAMEF22A3QJZ6 481 aa8.83□□□□□ -1
LINC00517-202ENST00000554257 PDIA6Q15084 440 aa8.83□□□□□ -1
LINC00517-202ENST00000554257 ZNF790Q6PG37 636 aa8.83□□□□□ -1
LINC00517-202ENST00000554257 EXOSC9Q06265 439 aaKnown RBP8.83□□□□□ -1
LINC00517-202ENST00000554257 DDX54Q8TDD1 881 aaKnown RBP8.83□□□□□ -1
LINC00517-202ENST00000554257 PXDNLA1KZ92 1463 aa8.83□□□□□ -1
LINC00517-202ENST00000554257 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
LINC00517-202ENST00000554257 KIAA1551Q9HCM1 1747 aa8.82□□□□□ -1
LINC00517-202ENST00000554257 GIGYF1O75420 1035 aaPredicted RBP8.82□□□□□ -1
LINC00517-202ENST00000554257 CT47B1P0C2W7 299 aaPredicted RBP8.82□□□□□ -1
LINC00517-202ENST00000554257 RXRBP28702 533 aa8.82□□□□□ -1
LINC00517-202ENST00000554257 KAT6BQ8WYB5 2073 aa8.82□□□□□ -1
LINC00517-202ENST00000554257 KIF13BQ9NQT8 1826 aa8.82□□□□□ -1
LINC00517-202ENST00000554257 HOXB7P09629 217 aa8.82□□□□□ -1
LINC00517-202ENST00000554257 ASAP1Q9ULH1 1129 aa8.82□□□□□ -1
LINC00517-202ENST00000554257 BTBD11A6QL63 1104 aa8.81□□□□□ -1
LINC00517-202ENST00000554257 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
LINC00517-202ENST00000554257 FAM182BQ5T319 152 aa8.81□□□□□ -1
LINC00517-202ENST00000554257 KRT27Q7Z3Y8 459 aa8.81□□□□□ -1
LINC00517-202ENST00000554257 MYH16Q9H6N6 1097 aa8.81□□□□□ -1
LINC00517-202ENST00000554257 SLC39A6Q13433 755 aa8.81□□□□□ -1
LINC00517-202ENST00000554257 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
LINC00517-202ENST00000554257 IBTKQ9P2D0 1353 aaPredicted RBP8.81□□□□□ -1
LINC00517-202ENST00000554257 PRIM1P49642 420 aaKnown RBP8.81□□□□□ -1
LINC00517-202ENST00000554257 ZNF496Q96IT1 587 aaPredicted RBP8.81□□□□□ -1
LINC00517-202ENST00000554257 NEFMP07197 916 aa8.8□□□□□ -1
LINC00517-202ENST00000554257 VSIG10Q8N0Z9 540 aa8.8□□□□□ -1
LINC00517-202ENST00000554257 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
LINC00517-202ENST00000554257 TSPYL4Q9UJ04 414 aa8.8□□□□□ -1
LINC00517-202ENST00000554257 ANKRD31Q8N7Z5 1873 aa8.8□□□□□ -1
LINC00517-202ENST00000554257 PALLDQ8WX93 1383 aa8.79□□□□□ -1
LINC00517-202ENST00000554257 BCL11BQ9C0K0 894 aaPredicted RBP8.79□□□□□ -1
LINC00517-202ENST00000554257 DLEC1Q9Y238 1755 aa8.79□□□□□ -1
LINC00517-202ENST00000554257 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
LINC00517-202ENST00000554257 CABP4P57796 275 aa8.79□□□□□ -1
LINC00517-202ENST00000554257 ALDH1L2Q3SY69 923 aa8.79□□□□□ -1
LINC00517-202ENST00000554257 PROM2Q8N271 834 aa8.79□□□□□ -1
LINC00517-202ENST00000554257 ITPK1Q13572 414 aa8.78□□□□□ -1
LINC00517-202ENST00000554257 TWISTNBQ3B726 338 aaPredicted RBP8.78□□□□□ -1
LINC00517-202ENST00000554257 SSH1Q8WYL5 1049 aa8.78□□□□□ -1
LINC00517-202ENST00000554257 ZNF428Q96B54 188 aa8.78□□□□□ -1
LINC00517-202ENST00000554257 ACSBG1Q96GR2 724 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms