RNA–Protein interactions for RNA: ENST00000554189.5

LGMN-207, Transcript of legumain, humanhuman

TSL 4

Gene LGMN, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-207ENST00000554189 ATG3Q9NT62 314 aa21.35■■□□□ 1.01
LGMN-207ENST00000554189 KLHL34Q8N239 644 aa21.34■■□□□ 1.01
LGMN-207ENST00000554189 COL23A1Q86Y22 540 aaPredicted RBP21.33■■□□□ 1.01
LGMN-207ENST00000554189 FHDC1Q9C0D6 1143 aaPredicted RBP21.33■■□□□ 1.01
LGMN-207ENST00000554189 SCN11AQ9UI33 1791 aa21.33■■□□□ 1
LGMN-207ENST00000554189 COL3A1P02461 1466 aaPredicted RBP21.32■■□□□ 1
LGMN-207ENST00000554189 PHF14O94880 888 aa21.32■■□□□ 1
LGMN-207ENST00000554189 NUDCQ9Y266 331 aa21.32■■□□□ 1
LGMN-207ENST00000554189 NFATC2IPQ8NCF5 419 aa21.31■■□□□ 1
LGMN-207ENST00000554189 SGIP1Q9BQI5 828 aa21.31■■□□□ 1
LGMN-207ENST00000554189 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
LGMN-207ENST00000554189 PPP2R1AP30153 589 aa21.3■■□□□ 1
LGMN-207ENST00000554189 LINC00116Q8NCU8 138 aa21.3■■□□□ 1
LGMN-207ENST00000554189 UBR3Q6ZT12 1888 aa21.29■■□□□ 1
LGMN-207ENST00000554189 GNPATO15228 680 aa21.29■■□□□ 1
LGMN-207ENST00000554189 MTHFSDQ2M296 383 aaKnown RBP21.29■■□□□ 1
LGMN-207ENST00000554189 MSL1Q68DK7 614 aa21.29■■□□□ 1
LGMN-207ENST00000554189 ITPK1Q13572 414 aa21.28■■□□□ 1
LGMN-207ENST00000554189 SYT17Q9BSW7 474 aa21.28■■□□□ 1
LGMN-207ENST00000554189 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.27■■□□□ 1
LGMN-207ENST00000554189 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
LGMN-207ENST00000554189 SSFA2P28290 1259 aa21.27■■□□□ 1
LGMN-207ENST00000554189 GAS2L2Q8NHY3 880 aa21.27■■□□□ 1
LGMN-207ENST00000554189 SLC52A2Q9HAB3 445 aa21.26■□□□□ 0.99
LGMN-207ENST00000554189 COL24A1Q17RW2 1714 aa21.26■□□□□ 0.99
LGMN-207ENST00000554189 ZNF831Q5JPB2 1677 aa21.25■□□□□ 0.99
LGMN-207ENST00000554189 RNMTO43148 476 aaKnown RBP21.25■□□□□ 0.99
LGMN-207ENST00000554189 U2AF1L5P0DN76 240 aaPredicted RBP21.25■□□□□ 0.99
LGMN-207ENST00000554189 U2AF1Q01081 240 aaKnown RBP eCLIP21.25■□□□□ 0.99
LGMN-207ENST00000554189 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
LGMN-207ENST00000554189 RTCBQ9Y3I0 505 aaKnown RBP21.24■□□□□ 0.99
LGMN-207ENST00000554189 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
LGMN-207ENST00000554189 MAP3K5Q99683 1374 aa21.23■□□□□ 0.99
LGMN-207ENST00000554189 COL5A3P25940 1745 aaPredicted RBP21.22■□□□□ 0.99
LGMN-207ENST00000554189 SMIM5Q71RC9 77 aa21.22■□□□□ 0.99
LGMN-207ENST00000554189 MRC1P22897 1456 aa21.21■□□□□ 0.99
LGMN-207ENST00000554189 GNAT3A8MTJ3 354 aa21.21■□□□□ 0.99
LGMN-207ENST00000554189 TEFQ10587 303 aa21.21■□□□□ 0.99
LGMN-207ENST00000554189 TRAPPC3LQ5T215 181 aa21.21■□□□□ 0.99
LGMN-207ENST00000554189 AMIGO3Q86WK7 504 aa21.21■□□□□ 0.99
LGMN-207ENST00000554189 SLC4A9Q96Q91 983 aa21.21■□□□□ 0.99
LGMN-207ENST00000554189 NEFMP07197 916 aa21.2■□□□□ 0.98
LGMN-207ENST00000554189 CNTNAP4Q9C0A0 1308 aa21.2■□□□□ 0.98
LGMN-207ENST00000554189 DDX10Q13206 875 aaKnown RBP21.19■□□□□ 0.98
LGMN-207ENST00000554189 RC3H1Q5TC82 1133 aaKnown RBP21.19■□□□□ 0.98
LGMN-207ENST00000554189 TTC5Q8N0Z6 440 aa21.19■□□□□ 0.98
LGMN-207ENST00000554189 RSPH6AQ9H0K4 717 aa21.19■□□□□ 0.98
LGMN-207ENST00000554189 SLC39A6Q13433 755 aa21.18■□□□□ 0.98
LGMN-207ENST00000554189 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
LGMN-207ENST00000554189 ADAMTS7Q9UKP4 1686 aa21.18■□□□□ 0.98
LGMN-207ENST00000554189 ADRA2BP18089 450 aa21.17■□□□□ 0.98
LGMN-207ENST00000554189 RFC4P35249 363 aa21.17■□□□□ 0.98
LGMN-207ENST00000554189 GPR162Q16538 588 aa21.17■□□□□ 0.98
LGMN-207ENST00000554189 TJP1Q07157 1748 aa21.16■□□□□ 0.98
LGMN-207ENST00000554189 FCHSD2O94868 740 aa21.16■□□□□ 0.98
LGMN-207ENST00000554189 YY1P25490 414 aa21.16■□□□□ 0.98
LGMN-207ENST00000554189 RTF1Q92541 710 aaKnown RBP21.16■□□□□ 0.98
LGMN-207ENST00000554189 RPS6KA4O75676 772 aa21.15■□□□□ 0.98
LGMN-207ENST00000554189 CRKLP46109 303 aaKnown RBP21.15■□□□□ 0.98
LGMN-207ENST00000554189 PHACTR3Q96KR7 559 aa21.15■□□□□ 0.98
LGMN-207ENST00000554189 MYH14Q7Z406 1995 aaKnown RBP21.15■□□□□ 0.98
LGMN-207ENST00000554189 RALBP1Q15311 655 aa21.14■□□□□ 0.97
LGMN-207ENST00000554189 DNAJC10Q8IXB1 793 aa21.14■□□□□ 0.97
LGMN-207ENST00000554189 ZEB1P37275 1124 aaPredicted RBP21.13■□□□□ 0.97
LGMN-207ENST00000554189 IL17REQ8NFR9 667 aa21.13■□□□□ 0.97
LGMN-207ENST00000554189 NLGN2Q8NFZ4 835 aa21.13■□□□□ 0.97
LGMN-207ENST00000554189 ARHGEF1Q92888 912 aaKnown RBP21.13■□□□□ 0.97
LGMN-207ENST00000554189 CICQ96RK0 1608 aaPredicted RBP21.13■□□□□ 0.97
LGMN-207ENST00000554189 UTRNP46939 3433 aa21.11■□□□□ 0.97
LGMN-207ENST00000554189 KCPQ6ZWJ8 1503 aa21.11■□□□□ 0.97
LGMN-207ENST00000554189 NLGN1Q8N2Q7 840 aa21.11■□□□□ 0.97
LGMN-207ENST00000554189 CCDC87Q9NVE4 849 aa21.11■□□□□ 0.97
LGMN-207ENST00000554189 CD2APQ9Y5K6 639 aa21.11■□□□□ 0.97
LGMN-207ENST00000554189 C4AP0C0L4 1744 aa21.1■□□□□ 0.97
LGMN-207ENST00000554189 MMP10P09238 476 aa21.1■□□□□ 0.97
LGMN-207ENST00000554189 VSIG10Q8N0Z9 540 aa21.1■□□□□ 0.97
LGMN-207ENST00000554189 PNNQ9H307 717 aaKnown RBP21.1■□□□□ 0.97
LGMN-207ENST00000554189 SIPA1L3O60292 1781 aaPredicted RBP21.1■□□□□ 0.97
LGMN-207ENST00000554189 UBR2Q8IWV8 1755 aa21.1■□□□□ 0.97
LGMN-207ENST00000554189 MAPK8IP3Q9UPT6 1336 aa21.09■□□□□ 0.97
LGMN-207ENST00000554189 BTBD11A6QL63 1104 aa21.08■□□□□ 0.97
LGMN-207ENST00000554189 ZNF790Q6PG37 636 aa21.08■□□□□ 0.97
LGMN-207ENST00000554189 CHD4Q14839 1912 aa21.08■□□□□ 0.96
LGMN-207ENST00000554189 ZPR1O75312 459 aa21.07■□□□□ 0.96
LGMN-207ENST00000554189 STARD3NLO95772 234 aa21.07■□□□□ 0.96
LGMN-207ENST00000554189 INTS5Q6P9B9 1019 aaKnown RBP21.07■□□□□ 0.96
LGMN-207ENST00000554189 MCM10Q7L590 875 aa21.07■□□□□ 0.96
LGMN-207ENST00000554189 CEMIPQ8WUJ3 1361 aa21.07■□□□□ 0.96
LGMN-207ENST00000554189 GOLGB1Q14789 3259 aaKnown RBP21.07■□□□□ 0.96
LGMN-207ENST00000554189 CYP19A1P11511 503 aaPredicted RBP21.06■□□□□ 0.96
LGMN-207ENST00000554189 GYS1P13807 737 aa21.06■□□□□ 0.96
LGMN-207ENST00000554189 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
LGMN-207ENST00000554189 PARP3Q9Y6F1 533 aa21.06■□□□□ 0.96
LGMN-207ENST00000554189 MYBBP1AQ9BQG0 1328 aaKnown RBP21.05■□□□□ 0.96
LGMN-207ENST00000554189 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
LGMN-207ENST00000554189 TEX13AQ9BXU3 409 aaPredicted RBP21.05■□□□□ 0.96
LGMN-207ENST00000554189 USP42Q9H9J4 1324 aaKnown RBP21.04■□□□□ 0.96
LGMN-207ENST00000554189 HTATSF1O43719 755 aaKnown RBP21.04■□□□□ 0.96
LGMN-207ENST00000554189 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
LGMN-207ENST00000554189 NPM2Q86SE8 214 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms