RNA–Protein interactions for RNA: ENST00000554078.1

AC004858.1-201, humanhuman

BASIC

Gene AC004858.1, Length 242 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004858.1-201ENST00000554078 MSL1Q68DK7 614 aa13.39□□□□□ -0.27
AC004858.1-201ENST00000554078 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
AC004858.1-201ENST00000554078 AMIGO3Q86WK7 504 aa13.39□□□□□ -0.27
AC004858.1-201ENST00000554078 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
AC004858.1-201ENST00000554078 PHF14O94880 888 aa13.38□□□□□ -0.27
AC004858.1-201ENST00000554078 SSFA2P28290 1259 aa13.38□□□□□ -0.27
AC004858.1-201ENST00000554078 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
AC004858.1-201ENST00000554078 SLC4A9Q96Q91 983 aa13.38□□□□□ -0.27
AC004858.1-201ENST00000554078 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
AC004858.1-201ENST00000554078 GNPATO15228 680 aa13.37□□□□□ -0.27
AC004858.1-201ENST00000554078 GPR162Q16538 588 aa13.37□□□□□ -0.27
AC004858.1-201ENST00000554078 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
AC004858.1-201ENST00000554078 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
AC004858.1-201ENST00000554078 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
AC004858.1-201ENST00000554078 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
AC004858.1-201ENST00000554078 UTRNP46939 3433 aa13.36□□□□□ -0.27
AC004858.1-201ENST00000554078 U2SURPO15042 1029 aaKnown RBP13.35□□□□□ -0.27
AC004858.1-201ENST00000554078 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
AC004858.1-201ENST00000554078 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
AC004858.1-201ENST00000554078 NLGN2Q8NFZ4 835 aa13.35□□□□□ -0.27
AC004858.1-201ENST00000554078 RTCBQ9Y3I0 505 aaKnown RBP13.35□□□□□ -0.27
AC004858.1-201ENST00000554078 ITGB4P16144 1822 aa13.34□□□□□ -0.27
AC004858.1-201ENST00000554078 QSER1Q2KHR3 1735 aa13.34□□□□□ -0.27
AC004858.1-201ENST00000554078 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
AC004858.1-201ENST00000554078 RNMTO43148 476 aaKnown RBP13.33□□□□□ -0.28
AC004858.1-201ENST00000554078 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
AC004858.1-201ENST00000554078 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
AC004858.1-201ENST00000554078 C5P01031 1676 aa13.33□□□□□ -0.28
AC004858.1-201ENST00000554078 C4BP0C0L5 1744 aa13.33□□□□□ -0.28
AC004858.1-201ENST00000554078 RPS6KA4O75676 772 aa13.32□□□□□ -0.28
AC004858.1-201ENST00000554078 ADRA2BP18089 450 aa13.32□□□□□ -0.28
AC004858.1-201ENST00000554078 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
AC004858.1-201ENST00000554078 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
AC004858.1-201ENST00000554078 GOLGB1Q14789 3259 aaKnown RBP13.31□□□□□ -0.28
AC004858.1-201ENST00000554078 PPP2R1AP30153 589 aa13.31□□□□□ -0.28
AC004858.1-201ENST00000554078 RFC4P35249 363 aa13.31□□□□□ -0.28
AC004858.1-201ENST00000554078 NLGN1Q8N2Q7 840 aa13.31□□□□□ -0.28
AC004858.1-201ENST00000554078 CNTNAP4Q9C0A0 1308 aa13.31□□□□□ -0.28
AC004858.1-201ENST00000554078 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
AC004858.1-201ENST00000554078 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
AC004858.1-201ENST00000554078 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
AC004858.1-201ENST00000554078 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
AC004858.1-201ENST00000554078 GRIN3BO60391 1043 aa13.29□□□□□ -0.28
AC004858.1-201ENST00000554078 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
AC004858.1-201ENST00000554078 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
AC004858.1-201ENST00000554078 COL24A1Q17RW2 1714 aa13.29□□□□□ -0.28
AC004858.1-201ENST00000554078 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
AC004858.1-201ENST00000554078 MMP10P09238 476 aa13.28□□□□□ -0.28
AC004858.1-201ENST00000554078 YBX3P16989 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC004858.1-201ENST00000554078 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
AC004858.1-201ENST00000554078 IL17REQ8NFR9 667 aa13.28□□□□□ -0.28
AC004858.1-201ENST00000554078 PHACTR3Q96KR7 559 aa13.28□□□□□ -0.28
AC004858.1-201ENST00000554078 U2AF1L5P0DN76 240 aaPredicted RBP13.27□□□□□ -0.29
AC004858.1-201ENST00000554078 GYS1P13807 737 aa13.27□□□□□ -0.29
AC004858.1-201ENST00000554078 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
AC004858.1-201ENST00000554078 U2AF1Q01081 240 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC004858.1-201ENST00000554078 DNAJC10Q8IXB1 793 aa13.27□□□□□ -0.29
AC004858.1-201ENST00000554078 COL3A1P02461 1466 aaPredicted RBP13.27□□□□□ -0.29
AC004858.1-201ENST00000554078 FCHSD2O94868 740 aa13.26□□□□□ -0.29
AC004858.1-201ENST00000554078 TEFQ10587 303 aa13.26□□□□□ -0.29
AC004858.1-201ENST00000554078 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
AC004858.1-201ENST00000554078 ZNF784Q8NCA9 323 aaPredicted RBP13.26□□□□□ -0.29
AC004858.1-201ENST00000554078 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
AC004858.1-201ENST00000554078 CCDC87Q9NVE4 849 aa13.26□□□□□ -0.29
AC004858.1-201ENST00000554078 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
AC004858.1-201ENST00000554078 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
AC004858.1-201ENST00000554078 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
AC004858.1-201ENST00000554078 UBR3Q6ZT12 1888 aa13.24□□□□□ -0.29
AC004858.1-201ENST00000554078 STARD3NLO95772 234 aa13.23□□□□□ -0.29
AC004858.1-201ENST00000554078 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
AC004858.1-201ENST00000554078 SRP68Q9UHB9 627 aaKnown RBP13.23□□□□□ -0.29
AC004858.1-201ENST00000554078 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
AC004858.1-201ENST00000554078 ZPR1O75312 459 aa13.22□□□□□ -0.29
AC004858.1-201ENST00000554078 TGFB2P61812 414 aa13.22□□□□□ -0.29
AC004858.1-201ENST00000554078 FKBP8Q14318 412 aa13.22□□□□□ -0.29
AC004858.1-201ENST00000554078 ZNF496Q96IT1 587 aaPredicted RBP13.22□□□□□ -0.29
AC004858.1-201ENST00000554078 TEX13AQ9BXU3 409 aaPredicted RBP13.22□□□□□ -0.29
AC004858.1-201ENST00000554078 USP42Q9H9J4 1324 aaKnown RBP13.21□□□□□ -0.29
AC004858.1-201ENST00000554078 BTBD11A6QL63 1104 aa13.21□□□□□ -0.29
AC004858.1-201ENST00000554078 RTF1Q92541 710 aaKnown RBP13.21□□□□□ -0.29
AC004858.1-201ENST00000554078 MRC1P22897 1456 aa13.21□□□□□ -0.3
AC004858.1-201ENST00000554078 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 TM4SF1P30408 202 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 USPL1Q5W0Q7 1092 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 NARFQ9UHQ1 456 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 WWC3Q9ULE0 1092 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 ZBTB1Q9Y2K1 713 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 SCN11AQ9UI33 1791 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
AC004858.1-201ENST00000554078 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
AC004858.1-201ENST00000554078 MCM10Q7L590 875 aa13.19□□□□□ -0.3
AC004858.1-201ENST00000554078 FMNL2Q96PY5 1086 aa13.19□□□□□ -0.3
AC004858.1-201ENST00000554078 KCNQ3O43525 872 aa13.18□□□□□ -0.3
AC004858.1-201ENST00000554078 NEFMP07197 916 aa13.18□□□□□ -0.3
AC004858.1-201ENST00000554078 DPEP1P16444 411 aa13.18□□□□□ -0.3
AC004858.1-201ENST00000554078 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
AC004858.1-201ENST00000554078 DDR1Q08345 913 aa13.18□□□□□ -0.3
AC004858.1-201ENST00000554078 HEG1Q9ULI3 1381 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms