RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 CASZ1Q86V15 1759 aa8.77□□□□□ -1.01
FOXN3-205ENST00000553904 ADRA2BP18089 450 aa8.77□□□□□ -1.01
FOXN3-205ENST00000553904 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1.01
FOXN3-205ENST00000553904 RGPD2P0DJD1 1756 aa8.76□□□□□ -1.01
FOXN3-205ENST00000553904 RPS6KA4O75676 772 aa8.76□□□□□ -1.01
FOXN3-205ENST00000553904 RFC4P35249 363 aa8.76□□□□□ -1.01
FOXN3-205ENST00000553904 MSL1Q68DK7 614 aa8.76□□□□□ -1.01
FOXN3-205ENST00000553904 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
FOXN3-205ENST00000553904 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
FOXN3-205ENST00000553904 KDRP35968 1356 aa8.75□□□□□ -1.01
FOXN3-205ENST00000553904 DOT1LQ8TEK3 1739 aa8.75□□□□□ -1.01
FOXN3-205ENST00000553904 U2SURPO15042 1029 aaKnown RBP8.75□□□□□ -1.01
FOXN3-205ENST00000553904 PTCD1O75127 700 aaKnown RBP8.75□□□□□ -1.01
FOXN3-205ENST00000553904 HMOX1P09601 288 aa8.75□□□□□ -1.01
FOXN3-205ENST00000553904 ITPK1Q13572 414 aa8.75□□□□□ -1.01
FOXN3-205ENST00000553904 CNGB1Q14028 1251 aaPredicted RBP8.75□□□□□ -1.01
FOXN3-205ENST00000553904 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
FOXN3-205ENST00000553904 RNMTO43148 476 aaKnown RBP8.74□□□□□ -1.01
FOXN3-205ENST00000553904 NEFMP07197 916 aa8.74□□□□□ -1.01
FOXN3-205ENST00000553904 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
FOXN3-205ENST00000553904 SLC52A2Q9HAB3 445 aa8.74□□□□□ -1.01
FOXN3-205ENST00000553904 LY75O60449 1722 aa8.74□□□□□ -1.01
FOXN3-205ENST00000553904 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 TGFB2P61812 414 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 TEFQ10587 303 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 NPM2Q86SE8 214 aaKnown RBP8.73□□□□□ -1.01
FOXN3-205ENST00000553904 TTC5Q8N0Z6 440 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 ARHGEF1Q92888 912 aaKnown RBP8.73□□□□□ -1.01
FOXN3-205ENST00000553904 TEX13AQ9BXU3 409 aaPredicted RBP8.73□□□□□ -1.01
FOXN3-205ENST00000553904 PARP3Q9Y6F1 533 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 ANKRD26Q9UPS8 1709 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 CNTNAP4Q9C0A0 1308 aa8.73□□□□□ -1.01
FOXN3-205ENST00000553904 PKD1L3Q7Z443 1732 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 SHANK3Q9BYB0 1731 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 ZPR1O75312 459 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 STARD3NLO95772 234 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 CRKLP46109 303 aaKnown RBP8.72□□□□□ -1.01
FOXN3-205ENST00000553904 MTHFSDQ2M296 383 aaKnown RBP8.72□□□□□ -1.01
FOXN3-205ENST00000553904 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 ZNF784Q8NCA9 323 aaPredicted RBP8.72□□□□□ -1.01
FOXN3-205ENST00000553904 NLGN2Q8NFZ4 835 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 PNNQ9H307 717 aaKnown RBP8.72□□□□□ -1.01
FOXN3-205ENST00000553904 LGR6Q9HBX8 967 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
FOXN3-205ENST00000553904 FCHSD2O94868 740 aa8.71□□□□□ -1.02
FOXN3-205ENST00000553904 MMP10P09238 476 aa8.71□□□□□ -1.02
FOXN3-205ENST00000553904 RTF1Q92541 710 aaKnown RBP8.71□□□□□ -1.02
FOXN3-205ENST00000553904 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.02
FOXN3-205ENST00000553904 QSER1Q2KHR3 1735 aa8.71□□□□□ -1.02
FOXN3-205ENST00000553904 U2AF1L5P0DN76 240 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-205ENST00000553904 U2AF1Q01081 240 aaKnown RBP eCLIP8.7□□□□□ -1.02
FOXN3-205ENST00000553904 SMIM5Q71RC9 77 aa8.7□□□□□ -1.02
FOXN3-205ENST00000553904 KDM6AO15550 1401 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-205ENST00000553904 C4BP0C0L5 1744 aa8.69□□□□□ -1.02
FOXN3-205ENST00000553904 A0A087WZG4 1122 aa8.69□□□□□ -1.02
FOXN3-205ENST00000553904 HTATSF1O43719 755 aaKnown RBP8.69□□□□□ -1.02
FOXN3-205ENST00000553904 GYS1P13807 737 aa8.69□□□□□ -1.02
FOXN3-205ENST00000553904 AMIGO3Q86WK7 504 aa8.69□□□□□ -1.02
FOXN3-205ENST00000553904 C5P01031 1676 aa8.69□□□□□ -1.02
FOXN3-205ENST00000553904 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
FOXN3-205ENST00000553904 YBX3P16989 372 aaKnown RBP eCLIP8.68□□□□□ -1.02
FOXN3-205ENST00000553904 PPP2R1AP30153 589 aa8.68□□□□□ -1.02
FOXN3-205ENST00000553904 PRKAR2BP31323 418 aa8.68□□□□□ -1.02
FOXN3-205ENST00000553904 SLC39A6Q13433 755 aa8.68□□□□□ -1.02
FOXN3-205ENST00000553904 INTS5Q6P9B9 1019 aaKnown RBP8.68□□□□□ -1.02
FOXN3-205ENST00000553904 ZNF790Q6PG37 636 aa8.68□□□□□ -1.02
FOXN3-205ENST00000553904 DNAJC10Q8IXB1 793 aa8.68□□□□□ -1.02
FOXN3-205ENST00000553904 BTBD11A6QL63 1104 aa8.67□□□□□ -1.02
FOXN3-205ENST00000553904 ITGB4P16144 1822 aa8.67□□□□□ -1.02
FOXN3-205ENST00000553904 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
FOXN3-205ENST00000553904 FMNL2Q96PY5 1086 aa8.67□□□□□ -1.02
FOXN3-205ENST00000553904 PIM2Q9P1W9 311 aa8.67□□□□□ -1.02
FOXN3-205ENST00000553904 USP42Q9H9J4 1324 aaKnown RBP8.66□□□□□ -1.02
FOXN3-205ENST00000553904 GIGYF1O75420 1035 aaPredicted RBP8.66□□□□□ -1.02
FOXN3-205ENST00000553904 TM4SF1P30408 202 aa8.66□□□□□ -1.02
FOXN3-205ENST00000553904 RSPH6AQ9H0K4 717 aa8.66□□□□□ -1.02
FOXN3-205ENST00000553904 NARFQ9UHQ1 456 aa8.66□□□□□ -1.02
FOXN3-205ENST00000553904 BCS1LQ9Y276 419 aa8.66□□□□□ -1.02
FOXN3-205ENST00000553904 TOGARAM1Q9Y4F4 1720 aa8.66□□□□□ -1.02
FOXN3-205ENST00000553904 A0A0G2JLW4 131 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 CANXP27824 592 aaKnown RBP8.65□□□□□ -1.02
FOXN3-205ENST00000553904 C1QTNF8P60827 252 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 FKBP8Q14318 412 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 USPL1Q5W0Q7 1092 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 ARHGAP27Q6ZUM4 889 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 PNISRQ8TF01 805 aaKnown RBP8.65□□□□□ -1.02
FOXN3-205ENST00000553904 PHACTR3Q96KR7 559 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 GPBP1L1Q9HC44 474 aaPredicted RBP8.65□□□□□ -1.02
FOXN3-205ENST00000553904 PDZRN3Q9UPQ7 1066 aa8.65□□□□□ -1.02
FOXN3-205ENST00000553904 SOS1Q07889 1333 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 COL24A1Q17RW2 1714 aa8.64□□□□□ -1.03
FOXN3-205ENST00000553904 SNRPA1P09661 255 aaKnown RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 DPEP1P16444 411 aa8.64□□□□□ -1.03
FOXN3-205ENST00000553904 IL6STP40189 918 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 RALBP1Q15311 655 aa8.64□□□□□ -1.03
FOXN3-205ENST00000553904 TAF7Q15545 349 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 DALRD3Q5D0E6 543 aaKnown RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 ZNF496Q96IT1 587 aaPredicted RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 SRP68Q9UHB9 627 aaKnown RBP8.64□□□□□ -1.03
FOXN3-205ENST00000553904 ZNF831Q5JPB2 1677 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms