RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
FOXN3-204ENST00000553840 KLHL34Q8N239 644 aa23.9■■□□□ 1.42
FOXN3-204ENST00000553840 UBR3Q6ZT12 1888 aa23.9■■□□□ 1.42
FOXN3-204ENST00000553840 HMOX1P09601 288 aa23.89■■□□□ 1.41
FOXN3-204ENST00000553840 KDM6AO15550 1401 aaPredicted RBP23.89■■□□□ 1.41
FOXN3-204ENST00000553840 SCN11AQ9UI33 1791 aa23.88■■□□□ 1.41
FOXN3-204ENST00000553840 ZNF831Q5JPB2 1677 aa23.87■■□□□ 1.41
FOXN3-204ENST00000553840 AKAP4Q5JQC9 854 aa23.87■■□□□ 1.41
FOXN3-204ENST00000553840 LINC00116Q8NCU8 138 aa23.87■■□□□ 1.41
FOXN3-204ENST00000553840 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
FOXN3-204ENST00000553840 SSFA2P28290 1259 aa23.86■■□□□ 1.41
FOXN3-204ENST00000553840 PHF14O94880 888 aa23.85■■□□□ 1.41
FOXN3-204ENST00000553840 ITPK1Q13572 414 aa23.85■■□□□ 1.41
FOXN3-204ENST00000553840 NFATC2IPQ8NCF5 419 aa23.85■■□□□ 1.41
FOXN3-204ENST00000553840 CFAP53Q96M91 514 aa23.85■■□□□ 1.41
FOXN3-204ENST00000553840 VIRMAQ69YN4 1812 aaKnown RBP23.84■■□□□ 1.41
FOXN3-204ENST00000553840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.84■■□□□ 1.41
FOXN3-204ENST00000553840 YY1P25490 414 aa23.84■■□□□ 1.41
FOXN3-204ENST00000553840 MSL1Q68DK7 614 aa23.84■■□□□ 1.41
FOXN3-204ENST00000553840 U2SURPO15042 1029 aaKnown RBP23.83■■□□□ 1.41
FOXN3-204ENST00000553840 GNPATO15228 680 aa23.83■■□□□ 1.41
FOXN3-204ENST00000553840 COL3A1P02461 1466 aaPredicted RBP23.81■■□□□ 1.4
FOXN3-204ENST00000553840 COL5A3P25940 1745 aaPredicted RBP23.8■■□□□ 1.4
FOXN3-204ENST00000553840 RTCBQ9Y3I0 505 aaKnown RBP23.8■■□□□ 1.4
FOXN3-204ENST00000553840 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
FOXN3-204ENST00000553840 PTCD1O75127 700 aaKnown RBP23.78■■□□□ 1.4
FOXN3-204ENST00000553840 GPR162Q16538 588 aa23.78■■□□□ 1.4
FOXN3-204ENST00000553840 RC3H1Q5TC82 1133 aaKnown RBP23.78■■□□□ 1.4
FOXN3-204ENST00000553840 AMIGO3Q86WK7 504 aa23.78■■□□□ 1.4
FOXN3-204ENST00000553840 SLC52A2Q9HAB3 445 aa23.78■■□□□ 1.4
FOXN3-204ENST00000553840 NUDCQ9Y266 331 aa23.78■■□□□ 1.4
FOXN3-204ENST00000553840 RNMTO43148 476 aaKnown RBP23.77■■□□□ 1.4
FOXN3-204ENST00000553840 TRAPPC3LQ5T215 181 aa23.77■■□□□ 1.4
FOXN3-204ENST00000553840 SLC4A9Q96Q91 983 aa23.77■■□□□ 1.4
FOXN3-204ENST00000553840 CHD4Q14839 1912 aa23.76■■□□□ 1.39
FOXN3-204ENST00000553840 LGR6Q9HBX8 967 aa23.76■■□□□ 1.39
FOXN3-204ENST00000553840 CNTNAP4Q9C0A0 1308 aa23.76■■□□□ 1.39
FOXN3-204ENST00000553840 ADRA2BP18089 450 aa23.75■■□□□ 1.39
FOXN3-204ENST00000553840 SMIM5Q71RC9 77 aa23.75■■□□□ 1.39
FOXN3-204ENST00000553840 GAS2L2Q8NHY3 880 aa23.75■■□□□ 1.39
FOXN3-204ENST00000553840 PPP2R1AP30153 589 aa23.74■■□□□ 1.39
FOXN3-204ENST00000553840 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
FOXN3-204ENST00000553840 CD2APQ9Y5K6 639 aa23.74■■□□□ 1.39
FOXN3-204ENST00000553840 NLGN2Q8NFZ4 835 aa23.73■■□□□ 1.39
FOXN3-204ENST00000553840 MRC1P22897 1456 aa23.73■■□□□ 1.39
FOXN3-204ENST00000553840 ADAMTS7Q9UKP4 1686 aa23.73■■□□□ 1.39
FOXN3-204ENST00000553840 RPS6KA4O75676 772 aa23.72■■□□□ 1.39
FOXN3-204ENST00000553840 CICQ96RK0 1608 aaPredicted RBP23.72■■□□□ 1.39
FOXN3-204ENST00000553840 MYH14Q7Z406 1995 aaKnown RBP23.71■■□□□ 1.39
FOXN3-204ENST00000553840 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
FOXN3-204ENST00000553840 RFC4P35249 363 aa23.71■■□□□ 1.39
FOXN3-204ENST00000553840 TJP1Q07157 1748 aa23.7■■□□□ 1.39
FOXN3-204ENST00000553840 NLGN1Q8N2Q7 840 aa23.7■■□□□ 1.38
FOXN3-204ENST00000553840 CRKLP46109 303 aaKnown RBP23.69■■□□□ 1.38
FOXN3-204ENST00000553840 ARHGEF1Q92888 912 aaKnown RBP23.69■■□□□ 1.38
FOXN3-204ENST00000553840 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
FOXN3-204ENST00000553840 PRKAR2BP31323 418 aa23.68■■□□□ 1.38
FOXN3-204ENST00000553840 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.382e-7■□□□□ 8.2
FOXN3-204ENST00000553840 TEFQ10587 303 aa23.68■■□□□ 1.38
FOXN3-204ENST00000553840 SLC39A6Q13433 755 aa23.67■■□□□ 1.38
FOXN3-204ENST00000553840 TTC5Q8N0Z6 440 aa23.67■■□□□ 1.38
FOXN3-204ENST00000553840 GRIN3BO60391 1043 aa23.66■■□□□ 1.38
FOXN3-204ENST00000553840 RSPH6AQ9H0K4 717 aa23.66■■□□□ 1.38
FOXN3-204ENST00000553840 C4AP0C0L4 1744 aa23.66■■□□□ 1.38
FOXN3-204ENST00000553840 FCHSD2O94868 740 aa23.65■■□□□ 1.38
FOXN3-204ENST00000553840 MMP10P09238 476 aa23.65■■□□□ 1.38
FOXN3-204ENST00000553840 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.37
FOXN3-204ENST00000553840 VSIG10Q8N0Z9 540 aa23.64■■□□□ 1.37
FOXN3-204ENST00000553840 UBR2Q8IWV8 1755 aa23.63■■□□□ 1.37
FOXN3-204ENST00000553840 PHACTR3Q96KR7 559 aa23.63■■□□□ 1.37
FOXN3-204ENST00000553840 CCDC87Q9NVE4 849 aa23.63■■□□□ 1.37
FOXN3-204ENST00000553840 KCPQ6ZWJ8 1503 aa23.63■■□□□ 1.37
FOXN3-204ENST00000553840 NEFMP07197 916 aa23.62■■□□□ 1.37
FOXN3-204ENST00000553840 GYS1P13807 737 aa23.62■■□□□ 1.37
FOXN3-204ENST00000553840 IL17REQ8NFR9 667 aa23.62■■□□□ 1.37
FOXN3-204ENST00000553840 SIPA1L3O60292 1781 aaPredicted RBP23.62■■□□□ 1.37
FOXN3-204ENST00000553840 INTS5Q6P9B9 1019 aaKnown RBP23.61■■□□□ 1.37
FOXN3-204ENST00000553840 CYP19A1P11511 503 aaPredicted RBP23.6■■□□□ 1.37
FOXN3-204ENST00000553840 RTF1Q92541 710 aaKnown RBP23.6■■□□□ 1.37
FOXN3-204ENST00000553840 PARP3Q9Y6F1 533 aa23.6■■□□□ 1.37
FOXN3-204ENST00000553840 YBX3P16989 372 aaKnown RBP eCLIP23.59■■□□□ 1.37
FOXN3-204ENST00000553840 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
FOXN3-204ENST00000553840 ZPR1O75312 459 aa23.58■■□□□ 1.37
FOXN3-204ENST00000553840 STARD3NLO95772 234 aa23.58■■□□□ 1.37
FOXN3-204ENST00000553840 ZNF790Q6PG37 636 aa23.58■■□□□ 1.37
FOXN3-204ENST00000553840 TEX13AQ9BXU3 409 aaPredicted RBP23.58■■□□□ 1.37
FOXN3-204ENST00000553840 KIF13BQ9NQT8 1826 aa23.57■■□□□ 1.36
FOXN3-204ENST00000553840 CEMIPQ8WUJ3 1361 aa23.57■■□□□ 1.36
FOXN3-204ENST00000553840 SOS1Q07889 1333 aaPredicted RBP23.56■■□□□ 1.36
FOXN3-204ENST00000553840 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
FOXN3-204ENST00000553840 ZNF784Q8NCA9 323 aaPredicted RBP23.55■■□□□ 1.36
FOXN3-204ENST00000553840 FMNL2Q96PY5 1086 aa23.55■■□□□ 1.36
FOXN3-204ENST00000553840 SRP68Q9UHB9 627 aaKnown RBP23.55■■□□□ 1.36
FOXN3-204ENST00000553840 HEG1Q9ULI3 1381 aa23.54■■□□□ 1.36
FOXN3-204ENST00000553840 HTATSF1O43719 755 aaKnown RBP23.54■■□□□ 1.36
FOXN3-204ENST00000553840 TGFB2P61812 414 aa23.54■■□□□ 1.36
FOXN3-204ENST00000553840 RALBP1Q15311 655 aa23.54■■□□□ 1.36
FOXN3-204ENST00000553840 ZNF496Q96IT1 587 aaPredicted RBP23.54■■□□□ 1.36
FOXN3-204ENST00000553840 PNNQ9H307 717 aaKnown RBP23.54■■□□□ 1.36
FOXN3-204ENST00000553840 COL15A1P39059 1388 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms