RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 CANXP27824 592 aaKnown RBP22.6■■□□□ 1.21
PSEN1-206ENST00000553447 C20orf194Q5TEA3 1177 aa22.6■■□□□ 1.21
PSEN1-206ENST00000553447 FNBP4Q8N3X1 1017 aaPredicted RBP22.6■■□□□ 1.21
PSEN1-206ENST00000553447 TOGARAM1Q9Y4F4 1720 aa22.6■■□□□ 1.21
PSEN1-206ENST00000553447 NKX1-1Q15270 411 aaPredicted RBP22.59■■□□□ 1.21
PSEN1-206ENST00000553447 FRAT1Q92837 279 aaPredicted RBP22.59■■□□□ 1.21
PSEN1-206ENST00000553447 CDCA7Q9BWT1 371 aaPredicted RBP22.59■■□□□ 1.21
PSEN1-206ENST00000553447 SLC52A2Q9HAB3 445 aa22.59■■□□□ 1.21
PSEN1-206ENST00000553447 SOS1Q07889 1333 aaPredicted RBP22.58■■□□□ 1.21
PSEN1-206ENST00000553447 BRPF1P55201 1214 aaPredicted RBP22.58■■□□□ 1.21
PSEN1-206ENST00000553447 PDE3AQ14432 1141 aa22.57■■□□□ 1.2
PSEN1-206ENST00000553447 MRPL50Q8N5N7 158 aaKnown RBP22.57■■□□□ 1.2
PSEN1-206ENST00000553447 DDX54Q8TDD1 881 aaKnown RBP22.57■■□□□ 1.2
PSEN1-206ENST00000553447 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
PSEN1-206ENST00000553447 CACNA1FO60840 1977 aa22.57■■□□□ 1.2
PSEN1-206ENST00000553447 TNS2Q63HR2 1409 aa22.57■■□□□ 1.2
PSEN1-206ENST00000553447 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
PSEN1-206ENST00000553447 VPS72Q15906 364 aa22.56■■□□□ 1.2
PSEN1-206ENST00000553447 ZKSCAN2Q63HK3 967 aa22.56■■□□□ 1.2
PSEN1-206ENST00000553447 EXOC6Q8TAG9 804 aa22.56■■□□□ 1.2
PSEN1-206ENST00000553447 PPP4R2Q9NY27 417 aa22.56■■□□□ 1.2
PSEN1-206ENST00000553447 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
PSEN1-206ENST00000553447 MEX3CQ5U5Q3 659 aaKnown RBP22.55■■□□□ 1.2
PSEN1-206ENST00000553447 CCDC9Q9Y3X0 531 aaKnown RBP22.55■■□□□ 1.2
PSEN1-206ENST00000553447 KCNQ3O43525 872 aa22.54■■□□□ 1.2
PSEN1-206ENST00000553447 BARGINQ6ZT62 677 aa22.54■■□□□ 1.2
PSEN1-206ENST00000553447 NFATC2IPQ8NCF5 419 aa22.54■■□□□ 1.2
PSEN1-206ENST00000553447 NOB1Q9ULX3 412 aaKnown RBP22.54■■□□□ 1.2
PSEN1-206ENST00000553447 ITGB4P16144 1822 aa22.54■■□□□ 1.2
PSEN1-206ENST00000553447 PAPPAQ13219 1627 aa22.53■■□□□ 1.2
PSEN1-206ENST00000553447 ERVV-2B6SEH9 535 aa22.53■■□□□ 1.2
PSEN1-206ENST00000553447 EXOC5O00471 708 aa22.53■■□□□ 1.2
PSEN1-206ENST00000553447 CABP4P57796 275 aa22.53■■□□□ 1.2
PSEN1-206ENST00000553447 USP21Q9UK80 565 aa22.53■■□□□ 1.2
PSEN1-206ENST00000553447 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
PSEN1-206ENST00000553447 IPO8O15397 1037 aaKnown RBP22.52■■□□□ 1.2
PSEN1-206ENST00000553447 UBR2Q8IWV8 1755 aa22.51■■□□□ 1.19
PSEN1-206ENST00000553447 HOXB7P09629 217 aa22.51■■□□□ 1.19
PSEN1-206ENST00000553447 MS4A1P11836 297 aa22.51■■□□□ 1.19
PSEN1-206ENST00000553447 TNNQ9UQP3 1299 aa22.51■■□□□ 1.19
PSEN1-206ENST00000553447 C5P01031 1676 aa22.5■■□□□ 1.19
PSEN1-206ENST00000553447 ATF7IPQ6VMQ6 1270 aa22.5■■□□□ 1.19
PSEN1-206ENST00000553447 PANK1Q8TE04 598 aa22.5■■□□□ 1.19
PSEN1-206ENST00000553447 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
PSEN1-206ENST00000553447 DOT1LQ8TEK3 1739 aa22.49■■□□□ 1.19
PSEN1-206ENST00000553447 TRIM27P14373 513 aa22.49■■□□□ 1.19
PSEN1-206ENST00000553447 ZNF790Q6PG37 636 aa22.49■■□□□ 1.19
PSEN1-206ENST00000553447 ARHGAP45Q92619 1136 aa22.49■■□□□ 1.19
PSEN1-206ENST00000553447 DDB1Q16531 1140 aa22.48■■□□□ 1.19
PSEN1-206ENST00000553447 AFF2P51816 1311 aa22.48■■□□□ 1.19
PSEN1-206ENST00000553447 THSD7AQ9UPZ6 1657 aa22.47■■□□□ 1.19
PSEN1-206ENST00000553447 RLBP1P12271 317 aa22.47■■□□□ 1.19
PSEN1-206ENST00000553447 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
PSEN1-206ENST00000553447 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
PSEN1-206ENST00000553447 DZIP1LQ8IYY4 767 aaKnown RBP22.47■■□□□ 1.19
PSEN1-206ENST00000553447 GLI3P10071 1580 aa22.46■■□□□ 1.19
PSEN1-206ENST00000553447 LAMB4A4D0S4 1761 aa22.46■■□□□ 1.19
PSEN1-206ENST00000553447 FTSJ3Q8IY81 847 aaKnown RBP22.46■■□□□ 1.19
PSEN1-206ENST00000553447 CLUAP1Q96AJ1 413 aa22.46■■□□□ 1.19
PSEN1-206ENST00000553447 HDGFL1Q5TGJ6 251 aa22.45■■□□□ 1.18
PSEN1-206ENST00000553447 STK31Q9BXU1 1019 aa22.45■■□□□ 1.18
PSEN1-206ENST00000553447 CHMP4AQ9BY43 222 aa22.45■■□□□ 1.18
PSEN1-206ENST00000553447 COG6Q9Y2V7 657 aa22.45■■□□□ 1.18
PSEN1-206ENST00000553447 GIGYF1O75420 1035 aaPredicted RBP22.44■■□□□ 1.18
PSEN1-206ENST00000553447 ATRNO75882 1429 aa22.44■■□□□ 1.18
PSEN1-206ENST00000553447 SLC4A2P04920 1241 aa22.44■■□□□ 1.18
PSEN1-206ENST00000553447 FAM98CQ17RN3 349 aaKnown RBP22.44■■□□□ 1.18
PSEN1-206ENST00000553447 TTC5Q8N0Z6 440 aa22.44■■□□□ 1.18
PSEN1-206ENST00000553447 API5Q9BZZ5 524 aaKnown RBP22.43■■□□□ 1.18
PSEN1-206ENST00000553447 KCPQ6ZWJ8 1503 aa22.42■■□□□ 1.18
PSEN1-206ENST00000553447 PTPRCP08575 1304 aa22.42■■□□□ 1.18
PSEN1-206ENST00000553447 MVPQ14764 893 aaKnown RBP22.42■■□□□ 1.18
PSEN1-206ENST00000553447 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
PSEN1-206ENST00000553447 NECTIN2Q92692 538 aa22.42■■□□□ 1.18
PSEN1-206ENST00000553447 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
PSEN1-206ENST00000553447 ZNF496Q96IT1 587 aaPredicted RBP22.41■■□□□ 1.18
PSEN1-206ENST00000553447 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
PSEN1-206ENST00000553447 RGS12O14924 1447 aa22.4■■□□□ 1.18
PSEN1-206ENST00000553447 KAT6BQ8WYB5 2073 aa22.4■■□□□ 1.18
PSEN1-206ENST00000553447 ABCC4O15439 1325 aa22.4■■□□□ 1.18
PSEN1-206ENST00000553447 EIF2S2P20042 333 aaKnown RBP22.4■■□□□ 1.18
PSEN1-206ENST00000553447 MARCH10Q8NA82 808 aaPredicted RBP22.4■■□□□ 1.18
PSEN1-206ENST00000553447 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
PSEN1-206ENST00000553447 TRPC5Q9UL62 973 aaPredicted RBP22.4■■□□□ 1.18
PSEN1-206ENST00000553447 G2E3Q7L622 706 aa22.39■■□□□ 1.17
PSEN1-206ENST00000553447 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
PSEN1-206ENST00000553447 GJD4Q96KN9 370 aaPredicted RBP22.39■■□□□ 1.17
PSEN1-206ENST00000553447 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.17
PSEN1-206ENST00000553447 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
PSEN1-206ENST00000553447 BCL9O00512 1426 aa22.38■■□□□ 1.17
PSEN1-206ENST00000553447 SNRPA1P09661 255 aaKnown RBP22.37■■□□□ 1.17
PSEN1-206ENST00000553447 AAMPQ13685 434 aa22.37■■□□□ 1.17
PSEN1-206ENST00000553447 PIGBQ92521 554 aa22.37■■□□□ 1.17
PSEN1-206ENST00000553447 ITPRIPQ8IWB1 547 aa22.36■■□□□ 1.17
PSEN1-206ENST00000553447 CHPF2Q9P2E5 772 aa22.36■■□□□ 1.17
PSEN1-206ENST00000553447 DDX19BQ9UMR2 479 aa22.36■■□□□ 1.17
PSEN1-206ENST00000553447 FLIIQ13045 1269 aa22.35■■□□□ 1.17
PSEN1-206ENST00000553447 DBF4Q9UBU7 674 aaPredicted RBP22.34■■□□□ 1.17
PSEN1-206ENST00000553447 A0A0G2JS52 829 aa22.33■■□□□ 1.17
PSEN1-206ENST00000553447 MYT1Q01538 1121 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms