RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
HNRNPC-205ENST00000553300 MSH5O43196 834 aa17.66■□□□□ 0.42
HNRNPC-205ENST00000553300 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
HNRNPC-205ENST00000553300 COL23A1Q86Y22 540 aaPredicted RBP17.66■□□□□ 0.42
HNRNPC-205ENST00000553300 C4BP0C0L5 1744 aa17.65■□□□□ 0.42
HNRNPC-205ENST00000553300 NFATC2IPQ8NCF5 419 aa17.65■□□□□ 0.42
HNRNPC-205ENST00000553300 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
HNRNPC-205ENST00000553300 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 COL24A1Q17RW2 1714 aa17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 SSFA2P28290 1259 aa17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 LINC00116Q8NCU8 138 aa17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 SYT17Q9BSW7 474 aa17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
HNRNPC-205ENST00000553300 ITPK1Q13572 414 aa17.62■□□□□ 0.41
HNRNPC-205ENST00000553300 GAS2L2Q8NHY3 880 aa17.62■□□□□ 0.41
HNRNPC-205ENST00000553300 FHDC1Q9C0D6 1143 aaPredicted RBP17.62■□□□□ 0.41
HNRNPC-205ENST00000553300 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
HNRNPC-205ENST00000553300 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
HNRNPC-205ENST00000553300 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
HNRNPC-205ENST00000553300 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
HNRNPC-205ENST00000553300 LGR6Q9HBX8 967 aa17.6■□□□□ 0.41
HNRNPC-205ENST00000553300 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
HNRNPC-205ENST00000553300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.59■□□□□ 0.41
HNRNPC-205ENST00000553300 FCHSD2O94868 740 aa17.59■□□□□ 0.41
HNRNPC-205ENST00000553300 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
HNRNPC-205ENST00000553300 GNPATO15228 680 aa17.58■□□□□ 0.4
HNRNPC-205ENST00000553300 PTCD1O75127 700 aaKnown RBP17.58■□□□□ 0.4
HNRNPC-205ENST00000553300 U2AF1L5P0DN76 240 aaPredicted RBP17.58■□□□□ 0.4
HNRNPC-205ENST00000553300 U2AF1Q01081 240 aaKnown RBP eCLIP17.58■□□□□ 0.46e-11■■□□□ 14.2
HNRNPC-205ENST00000553300 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
HNRNPC-205ENST00000553300 CNTNAP4Q9C0A0 1308 aa17.58■□□□□ 0.4
HNRNPC-205ENST00000553300 UTRNP46939 3433 aa17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 PHF14O94880 888 aa17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 ADRA2BP18089 450 aa17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 RTCBQ9Y3I0 505 aaKnown RBP17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 MRC1P22897 1456 aa17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 ADAMTS7Q9UKP4 1686 aa17.57■□□□□ 0.4
HNRNPC-205ENST00000553300 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
HNRNPC-205ENST00000553300 ZEB1P37275 1124 aaPredicted RBP17.56■□□□□ 0.4
HNRNPC-205ENST00000553300 RALBP1Q15311 655 aa17.56■□□□□ 0.4
HNRNPC-205ENST00000553300 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
HNRNPC-205ENST00000553300 VIRMAQ69YN4 1812 aaKnown RBP17.56■□□□□ 0.4
HNRNPC-205ENST00000553300 RPS6KA4O75676 772 aa17.54■□□□□ 0.4
HNRNPC-205ENST00000553300 TEFQ10587 303 aa17.54■□□□□ 0.4
HNRNPC-205ENST00000553300 AMIGO3Q86WK7 504 aa17.54■□□□□ 0.4
HNRNPC-205ENST00000553300 COL5A3P25940 1745 aaPredicted RBP17.54■□□□□ 0.4
HNRNPC-205ENST00000553300 DDX10Q13206 875 aaKnown RBP17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 VSIG10Q8N0Z9 540 aa17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 CICQ96RK0 1608 aaPredicted RBP17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 NEFMP07197 916 aa17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
HNRNPC-205ENST00000553300 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.39
HNRNPC-205ENST00000553300 TTC5Q8N0Z6 440 aa17.52■□□□□ 0.39
HNRNPC-205ENST00000553300 KLHL34Q8N239 644 aa17.52■□□□□ 0.39
HNRNPC-205ENST00000553300 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.39
HNRNPC-205ENST00000553300 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.39
HNRNPC-205ENST00000553300 CD2APQ9Y5K6 639 aa17.52■□□□□ 0.39
HNRNPC-205ENST00000553300 HTATSF1O43719 755 aaKnown RBP17.51■□□□□ 0.39
HNRNPC-205ENST00000553300 RFC4P35249 363 aa17.51■□□□□ 0.39
HNRNPC-205ENST00000553300 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
HNRNPC-205ENST00000553300 RTF1Q92541 710 aaKnown RBP17.51■□□□□ 0.39
HNRNPC-205ENST00000553300 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
HNRNPC-205ENST00000553300 SMIM5Q71RC9 77 aa17.5■□□□□ 0.39
HNRNPC-205ENST00000553300 MYH14Q7Z406 1995 aaKnown RBP17.5■□□□□ 0.39
HNRNPC-205ENST00000553300 CEMIPQ8WUJ3 1361 aa17.5■□□□□ 0.39
HNRNPC-205ENST00000553300 GOLGB1Q14789 3259 aaKnown RBP17.48■□□□□ 0.39
HNRNPC-205ENST00000553300 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
HNRNPC-205ENST00000553300 DNAJC10Q8IXB1 793 aa17.48■□□□□ 0.39
HNRNPC-205ENST00000553300 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
HNRNPC-205ENST00000553300 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
HNRNPC-205ENST00000553300 TJP1Q07157 1748 aa17.48■□□□□ 0.39
HNRNPC-205ENST00000553300 CYP19A1P11511 503 aaPredicted RBP17.47■□□□□ 0.39
HNRNPC-205ENST00000553300 GPR162Q16538 588 aa17.47■□□□□ 0.39
HNRNPC-205ENST00000553300 INTS5Q6P9B9 1019 aaKnown RBP17.47■□□□□ 0.39
HNRNPC-205ENST00000553300 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
HNRNPC-205ENST00000553300 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
HNRNPC-205ENST00000553300 STARD3NLO95772 234 aa17.46■□□□□ 0.39
HNRNPC-205ENST00000553300 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 YY1P25490 414 aa17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 POTEDQ86YR6 584 aa17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 NLGN2Q8NFZ4 835 aa17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 UBR2Q8IWV8 1755 aa17.45■□□□□ 0.38
HNRNPC-205ENST00000553300 MMP10P09238 476 aa17.44■□□□□ 0.38
HNRNPC-205ENST00000553300 GYS1P13807 737 aa17.44■□□□□ 0.38
HNRNPC-205ENST00000553300 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
HNRNPC-205ENST00000553300 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
HNRNPC-205ENST00000553300 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
HNRNPC-205ENST00000553300 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
HNRNPC-205ENST00000553300 MAPK8IP3Q9UPT6 1336 aa17.43■□□□□ 0.38
HNRNPC-205ENST00000553300 GRIN3BO60391 1043 aa17.42■□□□□ 0.38
HNRNPC-205ENST00000553300 ZPR1O75312 459 aa17.42■□□□□ 0.38
HNRNPC-205ENST00000553300 MCM10Q7L590 875 aa17.42■□□□□ 0.38
HNRNPC-205ENST00000553300 USP42Q9H9J4 1324 aaKnown RBP17.42■□□□□ 0.38
HNRNPC-205ENST00000553300 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms