RNA–Protein interactions for RNA: ENST00000553272.6

PCNX1-203, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-203ENST00000553272 C16orf71Q8IYS4 520 aaPredicted RBP11.23□□□□□ -0.61
PCNX1-203ENST00000553272 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
PCNX1-203ENST00000553272 INSRP06213 1382 aa11.23□□□□□ -0.61
PCNX1-203ENST00000553272 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
PCNX1-203ENST00000553272 LOC102724428A0A0B4J2F2 783 aa11.22□□□□□ -0.61
PCNX1-203ENST00000553272 SIK1P57059 783 aa11.22□□□□□ -0.61
PCNX1-203ENST00000553272 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
PCNX1-203ENST00000553272 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
PCNX1-203ENST00000553272 GGNBP2Q9H3C7 697 aa11.22□□□□□ -0.61
PCNX1-203ENST00000553272 BCS1LQ9Y276 419 aa11.22□□□□□ -0.61
PCNX1-203ENST00000553272 ST20-MTHFSA0A0A6YYL1 179 aa11.21□□□□□ -0.61
PCNX1-203ENST00000553272 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
PCNX1-203ENST00000553272 MMP10P09238 476 aa11.2□□□□□ -0.62
PCNX1-203ENST00000553272 TGFB2P61812 414 aa11.2□□□□□ -0.62
PCNX1-203ENST00000553272 ITPK1Q13572 414 aa11.2□□□□□ -0.62
PCNX1-203ENST00000553272 NCAPD2Q15021 1401 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 FLT4P35916 1363 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 GNPATO15228 680 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 ARHGAP27Q6ZUM4 889 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 ASAP1Q9ULH1 1129 aa11.19□□□□□ -0.62
PCNX1-203ENST00000553272 C10orf71Q711Q0 1435 aa11.18□□□□□ -0.62
PCNX1-203ENST00000553272 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
PCNX1-203ENST00000553272 C9orf131Q5VYM1 1079 aa11.17□□□□□ -0.62
PCNX1-203ENST00000553272 NLGN1Q8N2Q7 840 aa11.17□□□□□ -0.62
PCNX1-203ENST00000553272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.17□□□□□ -0.625e-9■□□□□ 9.5
PCNX1-203ENST00000553272 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
PCNX1-203ENST00000553272 COL5A3P25940 1745 aaPredicted RBP11.17□□□□□ -0.62
PCNX1-203ENST00000553272 PLEKHG2Q9H7P9 1386 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 DPEP1P16444 411 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 KCNA3P22001 575 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 TMF1P82094 1093 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 FSTL1Q12841 308 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 TMOD3Q9NYL9 352 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 EMILIN1Q9Y6C2 1016 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 KIF20BQ96Q89 1820 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
PCNX1-203ENST00000553272 CACNA1SQ13698 1873 aa11.15□□□□□ -0.62
PCNX1-203ENST00000553272 FCHSD2O94868 740 aa11.15□□□□□ -0.62
PCNX1-203ENST00000553272 TRAPPC3LQ5T215 181 aa11.15□□□□□ -0.62
PCNX1-203ENST00000553272 ARHGEF1Q92888 912 aaKnown RBP11.15□□□□□ -0.62
PCNX1-203ENST00000553272 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
PCNX1-203ENST00000553272 MYH14Q7Z406 1995 aaKnown RBP11.15□□□□□ -0.62
PCNX1-203ENST00000553272 ZNF831Q5JPB2 1677 aa11.14□□□□□ -0.63
PCNX1-203ENST00000553272 GYS1P13807 737 aa11.14□□□□□ -0.63
PCNX1-203ENST00000553272 PHKG2P15735 406 aa11.14□□□□□ -0.63
PCNX1-203ENST00000553272 RC3H1Q5TC82 1133 aaKnown RBP11.14□□□□□ -0.63
PCNX1-203ENST00000553272 EYA1Q99502 592 aa11.14□□□□□ -0.63
PCNX1-203ENST00000553272 RTCBQ9Y3I0 505 aaKnown RBP11.14□□□□□ -0.63
PCNX1-203ENST00000553272 KDRP35968 1356 aa11.14□□□□□ -0.63
PCNX1-203ENST00000553272 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 IFNL2Q8IZJ0 200 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 RNF181Q9P0P0 153 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 VIRMAQ69YN4 1812 aaKnown RBP11.13□□□□□ -0.63
PCNX1-203ENST00000553272 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
PCNX1-203ENST00000553272 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
PCNX1-203ENST00000553272 KDM2BQ8NHM5 1336 aa11.12□□□□□ -0.63
PCNX1-203ENST00000553272 AFDNP55196 1824 aaKnown RBP11.12□□□□□ -0.63
PCNX1-203ENST00000553272 RPS6KA4O75676 772 aa11.12□□□□□ -0.63
PCNX1-203ENST00000553272 SMC1BQ8NDV3 1235 aa11.12□□□□□ -0.63
PCNX1-203ENST00000553272 CNTNAP4Q9C0A0 1308 aa11.11□□□□□ -0.63
PCNX1-203ENST00000553272 DICER1Q9UPY3 1922 aaKnown RBP11.11□□□□□ -0.63
PCNX1-203ENST00000553272 DCAF5Q96JK2 942 aa11.11□□□□□ -0.63
PCNX1-203ENST00000553272 PIM2Q9P1W9 311 aa11.11□□□□□ -0.63
PCNX1-203ENST00000553272 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
PCNX1-203ENST00000553272 ERVV-2B6SEH9 535 aa11.1□□□□□ -0.63
PCNX1-203ENST00000553272 PPM1GO15355 546 aaPredicted RBP11.1□□□□□ -0.63
PCNX1-203ENST00000553272 RFC4P35249 363 aa11.1□□□□□ -0.63
PCNX1-203ENST00000553272 RASSF7Q02833 373 aa11.09□□□□□ -0.63
PCNX1-203ENST00000553272 DALRD3Q5D0E6 543 aaKnown RBP11.09□□□□□ -0.63
PCNX1-203ENST00000553272 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
PCNX1-203ENST00000553272 MKRN1Q9UHC7 482 aaKnown RBP11.09□□□□□ -0.63
PCNX1-203ENST00000553272 FOXN1O15353 648 aa11.08□□□□□ -0.64
PCNX1-203ENST00000553272 POLKQ9UBT6 870 aa11.08□□□□□ -0.64
PCNX1-203ENST00000553272 DDR1Q08345 913 aa11.07□□□□□ -0.64
PCNX1-203ENST00000553272 FKBP8Q14318 412 aa11.07□□□□□ -0.64
PCNX1-203ENST00000553272 CDCA8Q53HL2 280 aa11.07□□□□□ -0.64
PCNX1-203ENST00000553272 CHRNA5P30532 468 aa11.06□□□□□ -0.64
PCNX1-203ENST00000553272 EIF4A2Q14240 407 aaKnown RBP11.06□□□□□ -0.64
PCNX1-203ENST00000553272 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
PCNX1-203ENST00000553272 USP42Q9H9J4 1324 aaKnown RBP11.06□□□□□ -0.64
PCNX1-203ENST00000553272 ADAMTS7Q9UKP4 1686 aa11.05□□□□□ -0.64
PCNX1-203ENST00000553272 KDM6AO15550 1401 aaPredicted RBP11.05□□□□□ -0.64
PCNX1-203ENST00000553272 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
PCNX1-203ENST00000553272 TM4SF1P30408 202 aa11.05□□□□□ -0.64
PCNX1-203ENST00000553272 CRKLP46109 303 aaKnown RBP11.05□□□□□ -0.64
PCNX1-203ENST00000553272 TJP1Q07157 1748 aa11.04□□□□□ -0.64
PCNX1-203ENST00000553272 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
PCNX1-203ENST00000553272 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
PCNX1-203ENST00000553272 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
PCNX1-203ENST00000553272 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
PCNX1-203ENST00000553272 GLTPD2A6NH11 291 aa11.03□□□□□ -0.64
PCNX1-203ENST00000553272 VEGFAP15692 232 aaPredicted RBP11.03□□□□□ -0.64
PCNX1-203ENST00000553272 CABP4P57796 275 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms