RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 NKX1-1Q15270 411 aaPredicted RBP15.47■□□□□ 0.07
TMEM116-218ENST00000552839 NCAPD2Q15021 1401 aa15.46■□□□□ 0.07
TMEM116-218ENST00000552839 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
TMEM116-218ENST00000552839 EMILIN1Q9Y6C2 1016 aa15.46■□□□□ 0.07
TMEM116-218ENST00000552839 GNPATO15228 680 aa15.45■□□□□ 0.06
TMEM116-218ENST00000552839 ITPK1Q13572 414 aa15.45■□□□□ 0.06
TMEM116-218ENST00000552839 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
TMEM116-218ENST00000552839 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
TMEM116-218ENST00000552839 SPG7Q9UQ90 795 aa15.44■□□□□ 0.06
TMEM116-218ENST00000552839 PXDNLA1KZ92 1463 aa15.44■□□□□ 0.06
TMEM116-218ENST00000552839 ANKRD26Q9UPS8 1709 aa15.43■□□□□ 0.06
TMEM116-218ENST00000552839 MMP10P09238 476 aa15.43■□□□□ 0.06
TMEM116-218ENST00000552839 ATP6V1AP38606 617 aa15.43■□□□□ 0.06
TMEM116-218ENST00000552839 APLP1P51693 650 aa15.43■□□□□ 0.06
TMEM116-218ENST00000552839 TMOD3Q9NYL9 352 aa15.43■□□□□ 0.06
TMEM116-218ENST00000552839 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
TMEM116-218ENST00000552839 DNAJC5GQ8N7S2 189 aa15.42■□□□□ 0.06
TMEM116-218ENST00000552839 A0A0G2JLW4 131 aa15.41■□□□□ 0.06
TMEM116-218ENST00000552839 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
TMEM116-218ENST00000552839 TOMM70O94826 608 aa15.41■□□□□ 0.06
TMEM116-218ENST00000552839 TGFB2P61812 414 aa15.41■□□□□ 0.06
TMEM116-218ENST00000552839 EYA1Q99502 592 aa15.41■□□□□ 0.06
TMEM116-218ENST00000552839 CARD14Q9BXL6 1004 aa15.41■□□□□ 0.06
TMEM116-218ENST00000552839 BCS1LQ9Y276 419 aa15.41■□□□□ 0.06
TMEM116-218ENST00000552839 PHKG2P15735 406 aa15.4■□□□□ 0.06
TMEM116-218ENST00000552839 ATG3Q9NT62 314 aa15.4■□□□□ 0.06
TMEM116-218ENST00000552839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.06
TMEM116-218ENST00000552839 IFNL2Q8IZJ0 200 aa15.39■□□□□ 0.05
TMEM116-218ENST00000552839 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
TMEM116-218ENST00000552839 COL5A3P25940 1745 aaPredicted RBP15.38■□□□□ 0.05
TMEM116-218ENST00000552839 WDR90Q96KV7 1748 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 C10orf71Q711Q0 1435 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 TRAPPC3LQ5T215 181 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 ARHGAP27Q6ZUM4 889 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 NLGN1Q8N2Q7 840 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 SLC4A9Q96Q91 983 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
TMEM116-218ENST00000552839 MYH14Q7Z406 1995 aaKnown RBP15.38■□□□□ 0.05
TMEM116-218ENST00000552839 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 ZNF831Q5JPB2 1677 aa15.38■□□□□ 0.05
TMEM116-218ENST00000552839 KDRP35968 1356 aa15.37■□□□□ 0.05
TMEM116-218ENST00000552839 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
TMEM116-218ENST00000552839 CC2D1BQ5T0F9 858 aaKnown RBP15.37■□□□□ 0.05
TMEM116-218ENST00000552839 ARHGEF1Q92888 912 aaKnown RBP15.37■□□□□ 0.05
TMEM116-218ENST00000552839 FCHSD2O94868 740 aa15.36■□□□□ 0.05
TMEM116-218ENST00000552839 DPEP1P16444 411 aa15.36■□□□□ 0.05
TMEM116-218ENST00000552839 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
TMEM116-218ENST00000552839 GYS1P13807 737 aa15.35■□□□□ 0.05
TMEM116-218ENST00000552839 RBM42Q9BTD8 480 aaKnown RBP15.35■□□□□ 0.05
TMEM116-218ENST00000552839 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
TMEM116-218ENST00000552839 KCNA3P22001 575 aa15.34■□□□□ 0.05
TMEM116-218ENST00000552839 RC3H1Q5TC82 1133 aaKnown RBP15.34■□□□□ 0.05
TMEM116-218ENST00000552839 POLKQ9UBT6 870 aa15.34■□□□□ 0.05
TMEM116-218ENST00000552839 SBF1O95248 1867 aa15.33■□□□□ 0.05
TMEM116-218ENST00000552839 RPS6KA4O75676 772 aa15.33■□□□□ 0.04
TMEM116-218ENST00000552839 ADRA2BP18089 450 aa15.33■□□□□ 0.04
TMEM116-218ENST00000552839 TNNT2P45379 298 aaPredicted RBP15.33■□□□□ 0.04
TMEM116-218ENST00000552839 HTRA3P83110 453 aa15.33■□□□□ 0.04
TMEM116-218ENST00000552839 C9orf131Q5VYM1 1079 aa15.33■□□□□ 0.04
TMEM116-218ENST00000552839 RBM46Q8TBY0 533 aaKnown RBP15.33■□□□□ 0.04
TMEM116-218ENST00000552839 PARP3Q9Y6F1 533 aa15.33■□□□□ 0.04
TMEM116-218ENST00000552839 CNTNAP4Q9C0A0 1308 aa15.33■□□□□ 0.04
TMEM116-218ENST00000552839 RFC4P35249 363 aa15.32■□□□□ 0.04
TMEM116-218ENST00000552839 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
TMEM116-218ENST00000552839 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
TMEM116-218ENST00000552839 ANP32CO43423 234 aa15.3■□□□□ 0.04
TMEM116-218ENST00000552839 AMER1Q5JTC6 1135 aaPredicted RBP15.3■□□□□ 0.04
TMEM116-218ENST00000552839 KCPQ6ZWJ8 1503 aa15.3■□□□□ 0.04
TMEM116-218ENST00000552839 C16orf71Q8IYS4 520 aaPredicted RBP15.3■□□□□ 0.04
TMEM116-218ENST00000552839 KLRG1Q96E93 195 aa15.3■□□□□ 0.04
TMEM116-218ENST00000552839 PLEKHG2Q9H7P9 1386 aa15.3■□□□□ 0.04
TMEM116-218ENST00000552839 PIM2Q9P1W9 311 aa15.3■□□□□ 0.04
TMEM116-218ENST00000552839 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
TMEM116-218ENST00000552839 COL13A1Q5TAT6 717 aaPredicted RBP15.29■□□□□ 0.04
TMEM116-218ENST00000552839 JMYQ8N9B5 988 aa15.29■□□□□ 0.04
TMEM116-218ENST00000552839 DCAF5Q96JK2 942 aa15.29■□□□□ 0.04
TMEM116-218ENST00000552839 KDM6AO15550 1401 aaPredicted RBP15.28■□□□□ 0.04
TMEM116-218ENST00000552839 PER1O15534 1290 aaPredicted RBP15.28■□□□□ 0.04
TMEM116-218ENST00000552839 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
TMEM116-218ENST00000552839 FSTL1Q12841 308 aa15.28■□□□□ 0.04
TMEM116-218ENST00000552839 RRAGCQ9HB90 399 aa15.28■□□□□ 0.04
TMEM116-218ENST00000552839 SRP68Q9UHB9 627 aaKnown RBP15.28■□□□□ 0.04
TMEM116-218ENST00000552839 TNRC6CQ9HCJ0 1690 aaKnown RBP15.28■□□□□ 0.04
TMEM116-218ENST00000552839 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
TMEM116-218ENST00000552839 CABP4P57796 275 aa15.27■□□□□ 0.04
TMEM116-218ENST00000552839 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.04
TMEM116-218ENST00000552839 RNF181Q9P0P0 153 aa15.27■□□□□ 0.04
TMEM116-218ENST00000552839 TJP1Q07157 1748 aa15.26■□□□□ 0.03
TMEM116-218ENST00000552839 ADAMTS7Q9UKP4 1686 aa15.26■□□□□ 0.03
TMEM116-218ENST00000552839 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
TMEM116-218ENST00000552839 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
TMEM116-218ENST00000552839 DDR1Q08345 913 aa15.26■□□□□ 0.03
TMEM116-218ENST00000552839 FKBP8Q14318 412 aa15.26■□□□□ 0.03
TMEM116-218ENST00000552839 PLEKHO1Q53GL0 409 aaPredicted RBP15.26■□□□□ 0.03
TMEM116-218ENST00000552839 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
TMEM116-218ENST00000552839 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
TMEM116-218ENST00000552839 CHRNA5P30532 468 aa15.25■□□□□ 0.03
TMEM116-218ENST00000552839 RALBP1Q15311 655 aa15.25■□□□□ 0.03
TMEM116-218ENST00000552839 ZNF530Q6P9A1 599 aaPredicted RBP15.25■□□□□ 0.03
TMEM116-218ENST00000552839 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms