RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 PTF1AQ7RTS3 328 aa7.97□□□□□ -1.13
HOXB3-213ENST00000552000 SYT17Q9BSW7 474 aa7.97□□□□□ -1.13
HOXB3-213ENST00000552000 FHDC1Q9C0D6 1143 aaPredicted RBP7.97□□□□□ -1.13
HOXB3-213ENST00000552000 PARP4Q9UKK3 1724 aaKnown RBP7.97□□□□□ -1.13
HOXB3-213ENST00000552000 OVOS2A0A0G2JMS6 1433 aa7.96□□□□□ -1.13
HOXB3-213ENST00000552000 OVOS2A0A0J9YW53 1432 aa7.96□□□□□ -1.13
HOXB3-213ENST00000552000 OVOS2Q6IE36 1432 aa7.96□□□□□ -1.13
HOXB3-213ENST00000552000 ATP7BP35670 1465 aa7.96□□□□□ -1.13
HOXB3-213ENST00000552000 PLSCR1O15162 318 aa7.96□□□□□ -1.14
HOXB3-213ENST00000552000 NUDT16Q96DE0 195 aaKnown RBP7.96□□□□□ -1.14
HOXB3-213ENST00000552000 RGPD3A6NKT7 1758 aaPredicted RBP7.96□□□□□ -1.14
HOXB3-213ENST00000552000 RGPD4Q7Z3J3 1758 aa7.96□□□□□ -1.14
HOXB3-213ENST00000552000 ADGRB1O14514 1584 aa7.96□□□□□ -1.14
HOXB3-213ENST00000552000 ITSN1Q15811 1721 aa7.95□□□□□ -1.14
HOXB3-213ENST00000552000 PEAK1Q9H792 1746 aa7.95□□□□□ -1.14
HOXB3-213ENST00000552000 C11orf95C9JLR9 678 aaPredicted RBP7.95□□□□□ -1.14
HOXB3-213ENST00000552000 ANKK1Q8NFD2 765 aa7.95□□□□□ -1.14
HOXB3-213ENST00000552000 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
HOXB3-213ENST00000552000 LMO7Q8WWI1 1683 aa7.95□□□□□ -1.14
HOXB3-213ENST00000552000 ZBTB7CA1YPR0 619 aa7.94□□□□□ -1.14
HOXB3-213ENST00000552000 ABTB2Q8N961 1025 aa7.94□□□□□ -1.14
HOXB3-213ENST00000552000 ZDHHC16Q969W1 377 aa7.94□□□□□ -1.14
HOXB3-213ENST00000552000 STK32BQ9NY57 414 aa7.94□□□□□ -1.14
HOXB3-213ENST00000552000 CPDO75976 1380 aa7.94□□□□□ -1.14
HOXB3-213ENST00000552000 GIGYF1O75420 1035 aaPredicted RBP7.93□□□□□ -1.14
HOXB3-213ENST00000552000 DDB1Q16531 1140 aa7.93□□□□□ -1.14
HOXB3-213ENST00000552000 PPP1R15BQ5SWA1 713 aa7.93□□□□□ -1.14
HOXB3-213ENST00000552000 KDM2AQ9Y2K7 1162 aa7.93□□□□□ -1.14
HOXB3-213ENST00000552000 USP19O94966 1318 aa7.93□□□□□ -1.14
HOXB3-213ENST00000552000 ACEP12821 1306 aa7.93□□□□□ -1.14
HOXB3-213ENST00000552000 CRB1P82279 1406 aa7.93□□□□□ -1.14
HOXB3-213ENST00000552000 COL5A2P05997 1499 aaPredicted RBP7.93□□□□□ -1.14
HOXB3-213ENST00000552000 GCP02774 474 aa7.92□□□□□ -1.14
HOXB3-213ENST00000552000 SLC15A2Q16348 729 aa7.92□□□□□ -1.14
HOXB3-213ENST00000552000 TXNRD1Q16881 649 aa7.92□□□□□ -1.14
HOXB3-213ENST00000552000 CDK19Q9BWU1 502 aa7.92□□□□□ -1.14
HOXB3-213ENST00000552000 MTFR1LQ9H019 292 aa7.92□□□□□ -1.14
HOXB3-213ENST00000552000 LRRC37A3O60309 1634 aa7.92□□□□□ -1.14
HOXB3-213ENST00000552000 ITGBL1O95965 494 aaPredicted RBP7.91□□□□□ -1.14
HOXB3-213ENST00000552000 GPR162Q16538 588 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 TOM1L2Q6ZVM7 507 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 NLRP13Q86W25 1043 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 HS6ST3Q8IZP7 471 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 MARCH10Q8NA82 808 aaPredicted RBP7.91□□□□□ -1.14
HOXB3-213ENST00000552000 ARXQ96QS3 562 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 ADAM33Q9BZ11 813 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 POLR3AO14802 1390 aaPredicted RBP7.91□□□□□ -1.14
HOXB3-213ENST00000552000 AKAP12Q02952 1782 aa7.91□□□□□ -1.14
HOXB3-213ENST00000552000 ARHGEF28Q8N1W1 1705 aaKnown RBP7.9□□□□□ -1.14
HOXB3-213ENST00000552000 PLEKHG3A1L390 1219 aa7.9□□□□□ -1.14
HOXB3-213ENST00000552000 EVI5O60447 810 aa7.9□□□□□ -1.14
HOXB3-213ENST00000552000 RYDENQ9NUL5 291 aaKnown RBP7.9□□□□□ -1.14
HOXB3-213ENST00000552000 TOPAZ1Q8N9V7 1692 aa7.89□□□□□ -1.15
HOXB3-213ENST00000552000 DCAF11Q8TEB1 546 aa7.89□□□□□ -1.15
HOXB3-213ENST00000552000 CRISPLD2Q9H0B8 497 aa7.89□□□□□ -1.15
HOXB3-213ENST00000552000 RABGEF1Q9UJ41 708 aa7.89□□□□□ -1.15
HOXB3-213ENST00000552000 WNK3Q9BYP7 1800 aa7.89□□□□□ -1.15
HOXB3-213ENST00000552000 AATKQ6ZMQ8 1374 aa7.88□□□□□ -1.15
HOXB3-213ENST00000552000 MAP3K5Q99683 1374 aa7.88□□□□□ -1.15
HOXB3-213ENST00000552000 PPP1R3GB7ZBB8 358 aa7.88□□□□□ -1.15
HOXB3-213ENST00000552000 BCAMP50895 628 aa7.88□□□□□ -1.15
HOXB3-213ENST00000552000 NYAP1Q6ZVC0 841 aa7.88□□□□□ -1.15
HOXB3-213ENST00000552000 RGPD5Q99666 1765 aa7.88□□□□□ -1.15
HOXB3-213ENST00000552000 BCL9O00512 1426 aa7.87□□□□□ -1.15
HOXB3-213ENST00000552000 COL18A1P39060 1754 aa7.87□□□□□ -1.15
HOXB3-213ENST00000552000 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
HOXB3-213ENST00000552000 LAPTM4AQ15012 233 aa7.87□□□□□ -1.15
HOXB3-213ENST00000552000 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
HOXB3-213ENST00000552000 SHANK3Q9BYB0 1731 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 CSB-PGBD3P0DP91 1061 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 PDE4AP27815 886 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 KCNC4Q03721 635 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 ZNF827Q17R98 1081 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 ACSBG1Q96GR2 724 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 PPIP5K1Q6PFW1 1433 aa7.86□□□□□ -1.15
HOXB3-213ENST00000552000 SOWAHBA6NEL2 793 aa7.85□□□□□ -1.15
HOXB3-213ENST00000552000 EXOC5O00471 708 aa7.85□□□□□ -1.15
HOXB3-213ENST00000552000 SRPK2P78362 688 aaKnown RBP7.85□□□□□ -1.15
HOXB3-213ENST00000552000 MAP3K9P80192 1104 aa7.85□□□□□ -1.15
HOXB3-213ENST00000552000 PROX2Q3B8N5 592 aa7.85□□□□□ -1.15
HOXB3-213ENST00000552000 LAPTM4BQ86VI4 370 aa7.85□□□□□ -1.15
HOXB3-213ENST00000552000 CARD10Q9BWT7 1032 aa7.85□□□□□ -1.15
HOXB3-213ENST00000552000 SLIT3O75094 1523 aa7.84□□□□□ -1.15
HOXB3-213ENST00000552000 POLD1P28340 1107 aa7.84□□□□□ -1.15
HOXB3-213ENST00000552000 NLGN2Q8NFZ4 835 aa7.84□□□□□ -1.15
HOXB3-213ENST00000552000 BTAF1O14981 1849 aa7.84□□□□□ -1.15
HOXB3-213ENST00000552000 PAPPAQ13219 1627 aa7.84□□□□□ -1.15
HOXB3-213ENST00000552000 BRD4O60885 1362 aaPredicted RBP7.84□□□□□ -1.16
HOXB3-213ENST00000552000 NHSQ6T4R5 1651 aa7.83□□□□□ -1.16
HOXB3-213ENST00000552000 YBX3P16989 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
HOXB3-213ENST00000552000 ARHGEF25Q86VW2 580 aa7.83□□□□□ -1.16
HOXB3-213ENST00000552000 LRRC4BQ9NT99 713 aa7.83□□□□□ -1.16
HOXB3-213ENST00000552000 CABP1Q9NZU7 370 aa7.83□□□□□ -1.16
HOXB3-213ENST00000552000 USP6P35125 1406 aa7.83□□□□□ -1.16
HOXB3-213ENST00000552000 CPSF1Q10570 1443 aaKnown RBP7.83□□□□□ -1.16
HOXB3-213ENST00000552000 TNS2Q63HR2 1409 aa7.83□□□□□ -1.16
HOXB3-213ENST00000552000 GRIN3BO60391 1043 aa7.82□□□□□ -1.16
HOXB3-213ENST00000552000 SLC16A10Q8TF71 515 aa7.82□□□□□ -1.16
HOXB3-213ENST00000552000 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
HOXB3-213ENST00000552000 ATP10DQ9P241 1426 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms