RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FBLN1P23142 703 aa19.59■□□□□ 0.73
SNRPF-203ENST00000551316 LBX1P52954 281 aa19.59■□□□□ 0.73
SNRPF-203ENST00000551316 MLLT1Q03111 559 aaPredicted RBP19.59■□□□□ 0.73
SNRPF-203ENST00000551316 CNTNAP1P78357 1384 aa19.58■□□□□ 0.73
SNRPF-203ENST00000551316 MYH14Q7Z406 1995 aaKnown RBP19.58■□□□□ 0.73
SNRPF-203ENST00000551316 PDE4DIPQ5VU43 2346 aa19.57■□□□□ 0.72
SNRPF-203ENST00000551316 MAP3K19Q56UN5 1328 aa19.56■□□□□ 0.72
SNRPF-203ENST00000551316 HOXC9P31274 260 aa19.56■□□□□ 0.72
SNRPF-203ENST00000551316 POTEIP0CG38 1075 aa19.55■□□□□ 0.72
SNRPF-203ENST00000551316 POTEJP0CG39 1038 aa19.55■□□□□ 0.72
SNRPF-203ENST00000551316 CTCFP49711 727 aaPredicted RBP19.55■□□□□ 0.72
SNRPF-203ENST00000551316 NBPF6Q5VWK0 638 aa19.55■□□□□ 0.72
SNRPF-203ENST00000551316 PIGBQ92521 554 aa19.55■□□□□ 0.72
SNRPF-203ENST00000551316 NBPF4Q96M43 638 aa19.55■□□□□ 0.72
SNRPF-203ENST00000551316 CYP27B1O15528 508 aa19.54■□□□□ 0.72
SNRPF-203ENST00000551316 CHRNA5P30532 468 aa19.54■□□□□ 0.72
SNRPF-203ENST00000551316 RGS19P49795 217 aa19.54■□□□□ 0.72
SNRPF-203ENST00000551316 CREBZFQ9NS37 354 aa19.54■□□□□ 0.72
SNRPF-203ENST00000551316 DICER1Q9UPY3 1922 aaKnown RBP19.54■□□□□ 0.72
SNRPF-203ENST00000551316 AFDNP55196 1824 aaKnown RBP19.53■□□□□ 0.72
SNRPF-203ENST00000551316 EDC4Q6P2E9 1401 aaKnown RBP19.53■□□□□ 0.72
SNRPF-203ENST00000551316 LOC102724428A0A0B4J2F2 783 aa19.53■□□□□ 0.72
SNRPF-203ENST00000551316 HSPA8P11142 646 aaKnown RBP19.53■□□□□ 0.72
SNRPF-203ENST00000551316 VEGFAP15692 232 aaPredicted RBP19.53■□□□□ 0.72
SNRPF-203ENST00000551316 SIK1P57059 783 aa19.53■□□□□ 0.72
SNRPF-203ENST00000551316 CCDC87Q9NVE4 849 aa19.53■□□□□ 0.72
SNRPF-203ENST00000551316 ADAMTS7Q9UKP4 1686 aa19.52■□□□□ 0.72
SNRPF-203ENST00000551316 GLTPD2A6NH11 291 aa19.52■□□□□ 0.72
SNRPF-203ENST00000551316 THSD7BQ9C0I4 1608 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 GYS1P13807 737 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 DALRD3Q5D0E6 543 aaKnown RBP19.51■□□□□ 0.71
SNRPF-203ENST00000551316 PIM2Q9P1W9 311 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 KDRP35968 1356 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 ZNF831Q5JPB2 1677 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 PCDH11XQ9BZA7 1347 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 PCDH11YQ9BZA8 1340 aa19.51■□□□□ 0.71
SNRPF-203ENST00000551316 A0A1W2PP64 1363 aa19.5■□□□□ 0.71
SNRPF-203ENST00000551316 CCDC85CA6NKD9 419 aa19.5■□□□□ 0.71
SNRPF-203ENST00000551316 VEGFBP49765 207 aa19.5■□□□□ 0.71
SNRPF-203ENST00000551316 SMARCC1Q92922 1105 aaPredicted RBP19.49■□□□□ 0.71
SNRPF-203ENST00000551316 WBP1LQ9NX94 342 aa19.49■□□□□ 0.71
SNRPF-203ENST00000551316 ZC3H4Q9UPT8 1303 aaKnown RBP19.49■□□□□ 0.71
SNRPF-203ENST00000551316 TMF1P82094 1093 aa19.48■□□□□ 0.71
SNRPF-203ENST00000551316 DDR1Q08345 913 aa19.48■□□□□ 0.71
SNRPF-203ENST00000551316 ASAP1Q9ULH1 1129 aa19.47■□□□□ 0.71
SNRPF-203ENST00000551316 LTBP1Q14766 1721 aa19.47■□□□□ 0.71
SNRPF-203ENST00000551316 AIDAQ96BJ3 306 aa19.46■□□□□ 0.71
SNRPF-203ENST00000551316 SLC4A9Q96Q91 983 aa19.46■□□□□ 0.71
SNRPF-203ENST00000551316 NLGN1Q8N2Q7 840 aa19.45■□□□□ 0.7
SNRPF-203ENST00000551316 ARHGEF1Q92888 912 aaKnown RBP19.45■□□□□ 0.7
SNRPF-203ENST00000551316 NRXN2Q9P2S2 1712 aa19.45■□□□□ 0.7
SNRPF-203ENST00000551316 FER1L6Q2WGJ9 1857 aa19.44■□□□□ 0.7
SNRPF-203ENST00000551316 ATP6V1AP38606 617 aa19.44■□□□□ 0.7
SNRPF-203ENST00000551316 PARP3Q9Y6F1 533 aa19.44■□□□□ 0.7
SNRPF-203ENST00000551316 CGNL1Q0VF96 1302 aa19.44■□□□□ 0.7
SNRPF-203ENST00000551316 PASKQ96RG2 1323 aa19.44■□□□□ 0.7
SNRPF-203ENST00000551316 ADAMTSL1Q8N6G6 1762 aa19.44■□□□□ 0.7
SNRPF-203ENST00000551316 TJP1Q07157 1748 aa19.43■□□□□ 0.7
SNRPF-203ENST00000551316 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
SNRPF-203ENST00000551316 RTL1A6NKG5 1358 aa19.43■□□□□ 0.7
SNRPF-203ENST00000551316 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
SNRPF-203ENST00000551316 NFKBIEO00221 500 aa19.42■□□□□ 0.7
SNRPF-203ENST00000551316 TATP17735 454 aaPredicted RBP19.42■□□□□ 0.7
SNRPF-203ENST00000551316 LMNB1P20700 586 aa19.42■□□□□ 0.7
SNRPF-203ENST00000551316 CHADLQ6NUI6 762 aa19.42■□□□□ 0.7
SNRPF-203ENST00000551316 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
SNRPF-203ENST00000551316 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
SNRPF-203ENST00000551316 AMPHP49418 695 aa19.41■□□□□ 0.7
SNRPF-203ENST00000551316 RRS1Q15050 365 aaKnown RBP19.41■□□□□ 0.7
SNRPF-203ENST00000551316 TRAPPC3LQ5T215 181 aa19.41■□□□□ 0.7
SNRPF-203ENST00000551316 SRP68Q9UHB9 627 aaKnown RBP19.41■□□□□ 0.7
SNRPF-203ENST00000551316 RTCBQ9Y3I0 505 aaKnown RBP19.4■□□□□ 0.7
SNRPF-203ENST00000551316 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.7
SNRPF-203ENST00000551316 FKBP8Q14318 412 aa19.39■□□□□ 0.69
SNRPF-203ENST00000551316 HMGB2P26583 209 aaKnown RBP19.38■□□□□ 0.69
SNRPF-203ENST00000551316 ATG3Q9NT62 314 aa19.38■□□□□ 0.69
SNRPF-203ENST00000551316 NCAPD2Q15021 1401 aa19.37■□□□□ 0.69
SNRPF-203ENST00000551316 TMC1Q8TDI8 760 aa19.37■□□□□ 0.69
SNRPF-203ENST00000551316 CASP8AP2Q9UKL3 1982 aa19.36■□□□□ 0.69
SNRPF-203ENST00000551316 SCN4AP35499 1836 aa19.35■□□□□ 0.69
SNRPF-203ENST00000551316 NKX1-1Q15270 411 aaPredicted RBP19.35■□□□□ 0.69
SNRPF-203ENST00000551316 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
SNRPF-203ENST00000551316 CARMIL3Q8ND23 1372 aa19.34■□□□□ 0.69
SNRPF-203ENST00000551316 HDGFL2Q7Z4V5 671 aaPredicted RBP19.34■□□□□ 0.69
SNRPF-203ENST00000551316 TMOD3Q9NYL9 352 aa19.34■□□□□ 0.69
SNRPF-203ENST00000551316 KIF20BQ96Q89 1820 aa19.34■□□□□ 0.69
SNRPF-203ENST00000551316 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
SNRPF-203ENST00000551316 POLRMTO00411 1230 aaKnown RBP19.33■□□□□ 0.68
SNRPF-203ENST00000551316 RFC4P35249 363 aa19.33■□□□□ 0.68
SNRPF-203ENST00000551316 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
SNRPF-203ENST00000551316 TSKSQ9UJT2 592 aa19.33■□□□□ 0.68
SNRPF-203ENST00000551316 USP42Q9H9J4 1324 aaKnown RBP19.32■□□□□ 0.68
SNRPF-203ENST00000551316 ANKRD26Q9UPS8 1709 aa19.32■□□□□ 0.68
SNRPF-203ENST00000551316 ADRA2BP18089 450 aa19.32■□□□□ 0.68
SNRPF-203ENST00000551316 HSP90AB2PQ58FF8 381 aa19.32■□□□□ 0.68
SNRPF-203ENST00000551316 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
SNRPF-203ENST00000551316 ROCK2O75116 1388 aaKnown RBP19.31■□□□□ 0.68
SNRPF-203ENST00000551316 TMEM88BA6NKF7 163 aa19.3■□□□□ 0.68
SNRPF-203ENST00000551316 DDNO94850 711 aaPredicted RBP19.3■□□□□ 0.68
SNRPF-203ENST00000551316 ITGBL1O95965 494 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms