RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 RGS3P49796 1198 aa24.98■■□□□ 1.59
SSH1-209ENST00000551165 F6X3S4 739 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 CCDC30Q5VVM6 783 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 OVOS2A0A0G2JMS6 1433 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 SIPA1L3O60292 1781 aaPredicted RBP24.97■■□□□ 1.59
SSH1-209ENST00000551165 EVA1CP58658 441 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 PIP4K2BP78356 416 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 IFNL2Q8IZJ0 200 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 PTPRCP08575 1304 aa24.97■■□□□ 1.59
SSH1-209ENST00000551165 EIF2S2P20042 333 aaKnown RBP24.96■■□□□ 1.59
SSH1-209ENST00000551165 STK31Q9BXU1 1019 aa24.96■■□□□ 1.59
SSH1-209ENST00000551165 RWDD1Q9H446 243 aaPredicted RBP24.96■■□□□ 1.59
SSH1-209ENST00000551165 PKD1L3Q7Z443 1732 aa24.96■■□□□ 1.59
SSH1-209ENST00000551165 HDGFL1Q5TGJ6 251 aa24.96■■□□□ 1.59
SSH1-209ENST00000551165 BTG4Q9NY30 223 aa24.96■■□□□ 1.59
SSH1-209ENST00000551165 USP35Q9P2H5 1018 aa24.95■■□□□ 1.59
SSH1-209ENST00000551165 PRAMEF22A3QJZ6 481 aa24.95■■□□□ 1.58
SSH1-209ENST00000551165 INTS3Q68E01 1043 aaKnown RBP24.95■■□□□ 1.58
SSH1-209ENST00000551165 NFATC2IPQ8NCF5 419 aa24.95■■□□□ 1.58
SSH1-209ENST00000551165 SCN11AQ9UI33 1791 aa24.95■■□□□ 1.58
SSH1-209ENST00000551165 SLC39A6Q13433 755 aa24.94■■□□□ 1.58
SSH1-209ENST00000551165 CARD10Q9BWT7 1032 aa24.94■■□□□ 1.58
SSH1-209ENST00000551165 SLC52A2Q9HAB3 445 aa24.93■■□□□ 1.58
SSH1-209ENST00000551165 FLIIQ13045 1269 aa24.93■■□□□ 1.58
SSH1-209ENST00000551165 HDAC1Q13547 482 aaPredicted RBP24.92■■□□□ 1.58
SSH1-209ENST00000551165 PHAXQ9H814 394 aaKnown RBP24.92■■□□□ 1.58
SSH1-209ENST00000551165 SOS1Q07889 1333 aaPredicted RBP24.91■■□□□ 1.58
SSH1-209ENST00000551165 SLC4A10Q6U841 1118 aa24.91■■□□□ 1.58
SSH1-209ENST00000551165 ANXA1P04083 346 aa24.9■■□□□ 1.58
SSH1-209ENST00000551165 ZCRB1Q8TBF4 217 aaKnown RBP24.9■■□□□ 1.58
SSH1-209ENST00000551165 PDZRN3Q9UPQ7 1066 aa24.9■■□□□ 1.58
SSH1-209ENST00000551165 PHLPP1O60346 1717 aa24.9■■□□□ 1.58
SSH1-209ENST00000551165 CHPF2Q9P2E5 772 aa24.9■■□□□ 1.58
SSH1-209ENST00000551165 COL16A1Q07092 1604 aaPredicted RBP24.9■■□□□ 1.58
SSH1-209ENST00000551165 COL22A1Q8NFW1 1626 aaPredicted RBP24.89■■□□□ 1.58
SSH1-209ENST00000551165 GIGYF1O75420 1035 aaPredicted RBP24.89■■□□□ 1.58
SSH1-209ENST00000551165 IL2RBP14784 551 aa24.89■■□□□ 1.58
SSH1-209ENST00000551165 FKBP5Q13451 457 aaPredicted RBP24.89■■□□□ 1.58
SSH1-209ENST00000551165 DCAF5Q96JK2 942 aa24.89■■□□□ 1.58
SSH1-209ENST00000551165 HEG1Q9ULI3 1381 aa24.89■■□□□ 1.58
SSH1-209ENST00000551165 SIRT2Q8IXJ6 389 aa24.89■■□□□ 1.57
SSH1-209ENST00000551165 PARP4Q9UKK3 1724 aaKnown RBP24.89■■□□□ 1.57
SSH1-209ENST00000551165 PDE4AP27815 886 aa24.88■■□□□ 1.57
SSH1-209ENST00000551165 ZNF790Q6PG37 636 aa24.87■■□□□ 1.57
SSH1-209ENST00000551165 MEIS3Q99687 375 aa24.87■■□□□ 1.57
SSH1-209ENST00000551165 PLEKHG2Q9H7P9 1386 aa24.87■■□□□ 1.57
SSH1-209ENST00000551165 ADAMTS2O95450 1211 aa24.86■■□□□ 1.57
SSH1-209ENST00000551165 HOXB7P09629 217 aa24.86■■□□□ 1.57
SSH1-209ENST00000551165 DDX54Q8TDD1 881 aaKnown RBP24.86■■□□□ 1.57
SSH1-209ENST00000551165 TOM1O60784 492 aa24.86■■□□□ 1.57
SSH1-209ENST00000551165 PCDH11XQ9BZA7 1347 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 PCDH11YQ9BZA8 1340 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 COL14A1Q05707 1796 aaKnown RBP24.84■■□□□ 1.57
SSH1-209ENST00000551165 PROSER3Q2NL68 480 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 BACH2Q9BYV9 841 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 SHANK3Q9BYB0 1731 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 CACNA1FO60840 1977 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 MRC1P22897 1456 aa24.84■■□□□ 1.57
SSH1-209ENST00000551165 CHMP4BQ9H444 224 aaKnown RBP24.83■■□□□ 1.57
SSH1-209ENST00000551165 SMC5Q8IY18 1101 aa24.83■■□□□ 1.57
SSH1-209ENST00000551165 UBAP1LF5GYI3 381 aa24.82■■□□□ 1.56
SSH1-209ENST00000551165 HSP90AB1P08238 724 aaKnown RBP24.82■■□□□ 1.56
SSH1-209ENST00000551165 CABP4P57796 275 aa24.82■■□□□ 1.56
SSH1-209ENST00000551165 ZNF496Q96IT1 587 aaPredicted RBP24.82■■□□□ 1.56
SSH1-209ENST00000551165 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
SSH1-209ENST00000551165 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
SSH1-209ENST00000551165 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
SSH1-209ENST00000551165 CCT4P50991 539 aaKnown RBP24.8■■□□□ 1.56
SSH1-209ENST00000551165 C5P01031 1676 aa24.79■■□□□ 1.56
SSH1-209ENST00000551165 ATP10DQ9P241 1426 aa24.79■■□□□ 1.56
SSH1-209ENST00000551165 DBF4Q9UBU7 674 aaPredicted RBP24.78■■□□□ 1.56
SSH1-209ENST00000551165 NKX1-1Q15270 411 aaPredicted RBP24.78■■□□□ 1.56
SSH1-209ENST00000551165 C8orf34Q49A92 452 aa24.76■■□□□ 1.55
SSH1-209ENST00000551165 PI4KAP2A4QPH2 592 aa24.76■■□□□ 1.55
SSH1-209ENST00000551165 PDIA6Q15084 440 aa24.76■■□□□ 1.55
SSH1-209ENST00000551165 PI4KAP1Q8N8J0 262 aa24.76■■□□□ 1.55
SSH1-209ENST00000551165 CEP85Q6P2H3 762 aa24.75■■□□□ 1.55
SSH1-209ENST00000551165 TTC5Q8N0Z6 440 aa24.75■■□□□ 1.55
SSH1-209ENST00000551165 USP16Q9Y5T5 823 aa24.75■■□□□ 1.55
SSH1-209ENST00000551165 ADCY9O60503 1353 aa24.74■■□□□ 1.55
SSH1-209ENST00000551165 PLCH1Q4KWH8 1693 aa24.74■■□□□ 1.55
SSH1-209ENST00000551165 PIP4K2AP48426 406 aaPredicted RBP24.74■■□□□ 1.55
SSH1-209ENST00000551165 NUCB1Q02818 461 aa24.74■■□□□ 1.55
SSH1-209ENST00000551165 ANKRD44Q8N8A2 993 aa24.74■■□□□ 1.55
SSH1-209ENST00000551165 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
SSH1-209ENST00000551165 LNPKQ9C0E8 428 aa24.73■■□□□ 1.55
SSH1-209ENST00000551165 ERVV-2B6SEH9 535 aa24.72■■□□□ 1.55
SSH1-209ENST00000551165 FAM161AQ3B820 660 aa24.72■■□□□ 1.55
SSH1-209ENST00000551165 TOGARAM1Q9Y4F4 1720 aa24.72■■□□□ 1.55
SSH1-209ENST00000551165 FMNL2Q96PY5 1086 aa24.72■■□□□ 1.55
SSH1-209ENST00000551165 CHMP4AQ9BY43 222 aa24.71■■□□□ 1.55
SSH1-209ENST00000551165 USP44Q9H0E7 712 aa24.71■■□□□ 1.55
SSH1-209ENST00000551165 GLI3P10071 1580 aa24.71■■□□□ 1.55
SSH1-209ENST00000551165 MYL6BP14649 208 aa24.71■■□□□ 1.55
SSH1-209ENST00000551165 ANKRD45Q5TZF3 282 aa24.71■■□□□ 1.55
SSH1-209ENST00000551165 DNAAF4Q8WXU2 420 aa24.71■■□□□ 1.55
SSH1-209ENST00000551165 DDX21Q9NR30 783 aaKnown RBP eCLIP24.71■■□□□ 1.55
SSH1-209ENST00000551165 SNRPA1P09661 255 aaKnown RBP24.7■■□□□ 1.54
SSH1-209ENST00000551165 AIMP1Q12904 312 aaKnown RBP24.7■■□□□ 1.54
SSH1-209ENST00000551165 PXDNLA1KZ92 1463 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms