RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
NPAS3-209ENST00000551008 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
NPAS3-209ENST00000551008 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
NPAS3-209ENST00000551008 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
NPAS3-209ENST00000551008 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
NPAS3-209ENST00000551008 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
NPAS3-209ENST00000551008 HMOX1P09601 288 aa17.69■□□□□ 0.42
NPAS3-209ENST00000551008 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
NPAS3-209ENST00000551008 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
NPAS3-209ENST00000551008 ARXQ96QS3 562 aa17.68■□□□□ 0.42
NPAS3-209ENST00000551008 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
NPAS3-209ENST00000551008 SIPA1L3O60292 1781 aaPredicted RBP17.68■□□□□ 0.42
NPAS3-209ENST00000551008 C4AP0C0L4 1744 aa17.67■□□□□ 0.42
NPAS3-209ENST00000551008 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
NPAS3-209ENST00000551008 UBR2Q8IWV8 1755 aa17.66■□□□□ 0.42
NPAS3-209ENST00000551008 UTRNP46939 3433 aa17.66■□□□□ 0.42
NPAS3-209ENST00000551008 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
NPAS3-209ENST00000551008 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
NPAS3-209ENST00000551008 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
NPAS3-209ENST00000551008 MTHFSDQ2M296 383 aaKnown RBP17.63■□□□□ 0.41
NPAS3-209ENST00000551008 C1orf141Q5JVX7 400 aa17.63■□□□□ 0.41
NPAS3-209ENST00000551008 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
NPAS3-209ENST00000551008 CHD4Q14839 1912 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.62■□□□□ 0.41
NPAS3-209ENST00000551008 ATP6V1AP38606 617 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 CABP4P57796 275 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 AK7Q96M32 723 aa17.62■□□□□ 0.41
NPAS3-209ENST00000551008 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
NPAS3-209ENST00000551008 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
NPAS3-209ENST00000551008 RNMTO43148 476 aaKnown RBP17.6■□□□□ 0.41
NPAS3-209ENST00000551008 PHF14O94880 888 aa17.6■□□□□ 0.41
NPAS3-209ENST00000551008 KIAA1551Q9HCM1 1747 aa17.6■□□□□ 0.41
NPAS3-209ENST00000551008 SSFA2P28290 1259 aa17.59■□□□□ 0.41
NPAS3-209ENST00000551008 FLAD1Q8NFF5 587 aa17.59■□□□□ 0.41
NPAS3-209ENST00000551008 NLGN2Q8NFZ4 835 aa17.59■□□□□ 0.41
NPAS3-209ENST00000551008 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
NPAS3-209ENST00000551008 KIF13BQ9NQT8 1826 aa17.58■□□□□ 0.41
NPAS3-209ENST00000551008 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
NPAS3-209ENST00000551008 GNPATO15228 680 aa17.58■□□□□ 0.4
NPAS3-209ENST00000551008 POLD1P28340 1107 aa17.58■□□□□ 0.4
NPAS3-209ENST00000551008 SLC52A2Q9HAB3 445 aa17.58■□□□□ 0.4
NPAS3-209ENST00000551008 CNTNAP4Q9C0A0 1308 aa17.57■□□□□ 0.4
NPAS3-209ENST00000551008 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
NPAS3-209ENST00000551008 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
NPAS3-209ENST00000551008 PTCD1O75127 700 aaKnown RBP17.56■□□□□ 0.4
NPAS3-209ENST00000551008 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
NPAS3-209ENST00000551008 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
NPAS3-209ENST00000551008 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
NPAS3-209ENST00000551008 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
NPAS3-209ENST00000551008 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
NPAS3-209ENST00000551008 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
NPAS3-209ENST00000551008 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
NPAS3-209ENST00000551008 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
NPAS3-209ENST00000551008 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
NPAS3-209ENST00000551008 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.4
NPAS3-209ENST00000551008 INTS5Q6P9B9 1019 aaKnown RBP17.52■□□□□ 0.4
NPAS3-209ENST00000551008 YY1P25490 414 aa17.51■□□□□ 0.39
NPAS3-209ENST00000551008 DNAJC10Q8IXB1 793 aa17.51■□□□□ 0.39
NPAS3-209ENST00000551008 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
NPAS3-209ENST00000551008 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
NPAS3-209ENST00000551008 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
NPAS3-209ENST00000551008 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
NPAS3-209ENST00000551008 BRCA1P38398 1863 aaKnown RBP17.5■□□□□ 0.39
NPAS3-209ENST00000551008 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
NPAS3-209ENST00000551008 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
NPAS3-209ENST00000551008 GYS1P13807 737 aa17.49■□□□□ 0.39
NPAS3-209ENST00000551008 YBX3P16989 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
NPAS3-209ENST00000551008 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
NPAS3-209ENST00000551008 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
NPAS3-209ENST00000551008 CD2APQ9Y5K6 639 aa17.48■□□□□ 0.39
NPAS3-209ENST00000551008 AFDNP55196 1824 aaKnown RBP17.47■□□□□ 0.39
NPAS3-209ENST00000551008 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
NPAS3-209ENST00000551008 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
NPAS3-209ENST00000551008 TRAPPC3LQ5T215 181 aa17.47■□□□□ 0.39
NPAS3-209ENST00000551008 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
NPAS3-209ENST00000551008 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
NPAS3-209ENST00000551008 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
NPAS3-209ENST00000551008 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
NPAS3-209ENST00000551008 MMP10P09238 476 aa17.46■□□□□ 0.39
NPAS3-209ENST00000551008 USP42Q9H9J4 1324 aaKnown RBP17.46■□□□□ 0.38
NPAS3-209ENST00000551008 PXDNLA1KZ92 1463 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 NRXN2Q9P2S2 1712 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 FCHSD2O94868 740 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
NPAS3-209ENST00000551008 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 SCN7AQ01118 1682 aa17.45■□□□□ 0.38
NPAS3-209ENST00000551008 KCNQ3O43525 872 aa17.44■□□□□ 0.38
NPAS3-209ENST00000551008 GPR162Q16538 588 aa17.44■□□□□ 0.38
NPAS3-209ENST00000551008 ZBTB1Q9Y2K1 713 aa17.44■□□□□ 0.38
NPAS3-209ENST00000551008 HEG1Q9ULI3 1381 aa17.43■□□□□ 0.38
NPAS3-209ENST00000551008 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
NPAS3-209ENST00000551008 FKBP8Q14318 412 aa17.43■□□□□ 0.38
NPAS3-209ENST00000551008 ZNF790Q6PG37 636 aa17.43■□□□□ 0.38
NPAS3-209ENST00000551008 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
NPAS3-209ENST00000551008 PLEKHF1Q96S99 279 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms