RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
TROAP-212ENST00000550346 TTC5Q8N0Z6 440 aa17.06■□□□□ 0.32
TROAP-212ENST00000550346 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
TROAP-212ENST00000550346 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
TROAP-212ENST00000550346 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
TROAP-212ENST00000550346 EP400Q96L91 3159 aa17.04■□□□□ 0.32
TROAP-212ENST00000550346 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
TROAP-212ENST00000550346 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
TROAP-212ENST00000550346 TRIM35Q9UPQ4 493 aa17.04■□□□□ 0.32
TROAP-212ENST00000550346 LAS1LQ9Y4W2 734 aaKnown RBP17.04■□□□□ 0.32
TROAP-212ENST00000550346 ITGB4P16144 1822 aa17.04■□□□□ 0.32
TROAP-212ENST00000550346 DOT1LQ8TEK3 1739 aa17.04■□□□□ 0.32
TROAP-212ENST00000550346 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
TROAP-212ENST00000550346 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
TROAP-212ENST00000550346 ATG3Q9NT62 314 aa17.03■□□□□ 0.32
TROAP-212ENST00000550346 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.32
TROAP-212ENST00000550346 NHSQ6T4R5 1651 aa17.02■□□□□ 0.32
TROAP-212ENST00000550346 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
TROAP-212ENST00000550346 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
TROAP-212ENST00000550346 PTCD1O75127 700 aaKnown RBP17.01■□□□□ 0.31
TROAP-212ENST00000550346 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
TROAP-212ENST00000550346 BABAM1Q9NWV8 329 aa17.01■□□□□ 0.31
TROAP-212ENST00000550346 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
TROAP-212ENST00000550346 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
TROAP-212ENST00000550346 SLC39A6Q13433 755 aa17■□□□□ 0.31
TROAP-212ENST00000550346 EZH2Q15910 746 aaKnown RBP17■□□□□ 0.31
TROAP-212ENST00000550346 TXNRD1Q16881 649 aa17■□□□□ 0.31
TROAP-212ENST00000550346 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
TROAP-212ENST00000550346 CAMKK2Q96RR4 588 aa17■□□□□ 0.31
TROAP-212ENST00000550346 MIS18AQ9NYP9 233 aa17■□□□□ 0.31
TROAP-212ENST00000550346 CCNL1Q9UK58 526 aaPredicted RBP17■□□□□ 0.31
TROAP-212ENST00000550346 BTAF1O14981 1849 aa17■□□□□ 0.31
TROAP-212ENST00000550346 ZNF521Q96K83 1311 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 GNAI1P63096 354 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 PALLDQ8WX93 1383 aa16.99■□□□□ 0.31
TROAP-212ENST00000550346 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
TROAP-212ENST00000550346 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
TROAP-212ENST00000550346 SIK1P57059 783 aa16.98■□□□□ 0.31
TROAP-212ENST00000550346 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
TROAP-212ENST00000550346 TOGARAM1Q9Y4F4 1720 aa16.98■□□□□ 0.31
TROAP-212ENST00000550346 CFAP44Q96MT7 982 aa16.97■□□□□ 0.31
TROAP-212ENST00000550346 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
TROAP-212ENST00000550346 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
TROAP-212ENST00000550346 CHL1O00533 1208 aa16.95■□□□□ 0.3
TROAP-212ENST00000550346 PROM2Q8N271 834 aa16.95■□□□□ 0.3
TROAP-212ENST00000550346 CDCA7LQ96GN5 454 aa16.95■□□□□ 0.3
TROAP-212ENST00000550346 TNS1Q9HBL0 1735 aaKnown RBP16.95■□□□□ 0.3
TROAP-212ENST00000550346 IL16Q14005 1332 aa16.95■□□□□ 0.3
TROAP-212ENST00000550346 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
TROAP-212ENST00000550346 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
TROAP-212ENST00000550346 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
TROAP-212ENST00000550346 MRC1P22897 1456 aa16.93■□□□□ 0.3
TROAP-212ENST00000550346 KCNQ3O43525 872 aa16.93■□□□□ 0.3
TROAP-212ENST00000550346 STARD3NLO95772 234 aa16.93■□□□□ 0.3
TROAP-212ENST00000550346 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
TROAP-212ENST00000550346 KCNQ4P56696 695 aa16.93■□□□□ 0.3
TROAP-212ENST00000550346 ZNF496Q96IT1 587 aaPredicted RBP16.93■□□□□ 0.3
TROAP-212ENST00000550346 MYH16Q9H6N6 1097 aa16.93■□□□□ 0.3
TROAP-212ENST00000550346 STK32BQ9NY57 414 aa16.92■□□□□ 0.3
TROAP-212ENST00000550346 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
TROAP-212ENST00000550346 EIF4A1P60842 406 aaKnown RBP16.91■□□□□ 0.3
TROAP-212ENST00000550346 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
TROAP-212ENST00000550346 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
TROAP-212ENST00000550346 MBIPQ9NS73 344 aa16.91■□□□□ 0.3
TROAP-212ENST00000550346 LRRC4BQ9NT99 713 aa16.91■□□□□ 0.3
TROAP-212ENST00000550346 ZNF853P0CG23 659 aa16.9■□□□□ 0.3
TROAP-212ENST00000550346 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
TROAP-212ENST00000550346 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
TROAP-212ENST00000550346 AK7Q96M32 723 aa16.89■□□□□ 0.29
TROAP-212ENST00000550346 TFCP2L1Q9NZI6 479 aa16.89■□□□□ 0.29
TROAP-212ENST00000550346 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.29
TROAP-212ENST00000550346 E9PSI1 815 aa16.88■□□□□ 0.29
TROAP-212ENST00000550346 ITPK1Q13572 414 aa16.88■□□□□ 0.29
TROAP-212ENST00000550346 RC3H1Q5TC82 1133 aaKnown RBP16.88■□□□□ 0.29
TROAP-212ENST00000550346 TRMT2AQ8IZ69 625 aaKnown RBP16.88■□□□□ 0.29
TROAP-212ENST00000550346 SLC4A9Q96Q91 983 aa16.88■□□□□ 0.29
TROAP-212ENST00000550346 LY75O60449 1722 aa16.87■□□□□ 0.29
TROAP-212ENST00000550346 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
TROAP-212ENST00000550346 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
TROAP-212ENST00000550346 GIGYF1O75420 1035 aaPredicted RBP16.87■□□□□ 0.29
TROAP-212ENST00000550346 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
TROAP-212ENST00000550346 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
TROAP-212ENST00000550346 DUSP27Q5VZP5 1158 aa16.86■□□□□ 0.29
TROAP-212ENST00000550346 LINC00116Q8NCU8 138 aa16.86■□□□□ 0.29
TROAP-212ENST00000550346 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
TROAP-212ENST00000550346 TSR2Q969E8 191 aaKnown RBP16.86■□□□□ 0.29
TROAP-212ENST00000550346 MSH5O43196 834 aa16.85■□□□□ 0.29
TROAP-212ENST00000550346 EIF2S2P20042 333 aaKnown RBP16.85■□□□□ 0.29
TROAP-212ENST00000550346 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
TROAP-212ENST00000550346 CCDC87Q9NVE4 849 aa16.85■□□□□ 0.29
TROAP-212ENST00000550346 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
TROAP-212ENST00000550346 USP16Q9Y5T5 823 aa16.85■□□□□ 0.29
TROAP-212ENST00000550346 PAPPAQ13219 1627 aa16.85■□□□□ 0.29
TROAP-212ENST00000550346 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
TROAP-212ENST00000550346 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
TROAP-212ENST00000550346 GNPATO15228 680 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms