RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 SCN11AQ9UI33 1791 aa11.25□□□□□ -0.61
ATXN2-220ENST00000550236 QSER1Q2KHR3 1735 aa11.24□□□□□ -0.61
ATXN2-220ENST00000550236 PPP2R1AP30153 589 aa11.24□□□□□ -0.61
ATXN2-220ENST00000550236 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
ATXN2-220ENST00000550236 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
ATXN2-220ENST00000550236 COL23A1Q86Y22 540 aaPredicted RBP11.24□□□□□ -0.61
ATXN2-220ENST00000550236 NFATC2IPQ8NCF5 419 aa11.24□□□□□ -0.61
ATXN2-220ENST00000550236 SMARCC1Q92922 1105 aaPredicted RBP11.24□□□□□ -0.61
ATXN2-220ENST00000550236 MTFR1LQ9H019 292 aa11.24□□□□□ -0.61
ATXN2-220ENST00000550236 LGR6Q9HBX8 967 aa11.24□□□□□ -0.61
ATXN2-220ENST00000550236 KDM6AO15550 1401 aaPredicted RBP11.24□□□□□ -0.61
ATXN2-220ENST00000550236 C4BP0C0L5 1744 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
ATXN2-220ENST00000550236 SIK1P57059 783 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 ITPK1Q13572 414 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
ATXN2-220ENST00000550236 AMIGO3Q86WK7 504 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 NPC1L1Q9UHC9 1359 aa11.23□□□□□ -0.61
ATXN2-220ENST00000550236 ERVV-2B6SEH9 535 aa11.22□□□□□ -0.61
ATXN2-220ENST00000550236 COL3A1P02461 1466 aaPredicted RBP11.22□□□□□ -0.61
ATXN2-220ENST00000550236 HSP90AB1P08238 724 aaKnown RBP11.22□□□□□ -0.61
ATXN2-220ENST00000550236 KDRP35968 1356 aa11.22□□□□□ -0.61
ATXN2-220ENST00000550236 AK7Q96M32 723 aa11.22□□□□□ -0.61
ATXN2-220ENST00000550236 CFAP53Q96M91 514 aa11.22□□□□□ -0.61
ATXN2-220ENST00000550236 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.61
ATXN2-220ENST00000550236 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
ATXN2-220ENST00000550236 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.61
ATXN2-220ENST00000550236 ARXQ96QS3 562 aa11.21□□□□□ -0.61
ATXN2-220ENST00000550236 FHDC1Q9C0D6 1143 aaPredicted RBP11.21□□□□□ -0.61
ATXN2-220ENST00000550236 RNMTO43148 476 aaKnown RBP11.2□□□□□ -0.62
ATXN2-220ENST00000550236 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
ATXN2-220ENST00000550236 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
ATXN2-220ENST00000550236 SLC39A6Q13433 755 aa11.2□□□□□ -0.62
ATXN2-220ENST00000550236 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
ATXN2-220ENST00000550236 SGIP1Q9BQI5 828 aa11.2□□□□□ -0.62
ATXN2-220ENST00000550236 GNPATO15228 680 aa11.19□□□□□ -0.62
ATXN2-220ENST00000550236 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
ATXN2-220ENST00000550236 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
ATXN2-220ENST00000550236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.18□□□□□ -0.62
ATXN2-220ENST00000550236 POLD1P28340 1107 aa11.18□□□□□ -0.62
ATXN2-220ENST00000550236 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
ATXN2-220ENST00000550236 SYT17Q9BSW7 474 aa11.18□□□□□ -0.62
ATXN2-220ENST00000550236 NUDCQ9Y266 331 aa11.18□□□□□ -0.62
ATXN2-220ENST00000550236 SLC16A10Q8TF71 515 aa11.17□□□□□ -0.62
ATXN2-220ENST00000550236 SLC52A2Q9HAB3 445 aa11.17□□□□□ -0.62
ATXN2-220ENST00000550236 COL5A3P25940 1745 aaPredicted RBP11.17□□□□□ -0.62
ATXN2-220ENST00000550236 TJP1Q07157 1748 aa11.16□□□□□ -0.62
ATXN2-220ENST00000550236 IL17REQ8NFR9 667 aa11.16□□□□□ -0.62
ATXN2-220ENST00000550236 RSPH6AQ9H0K4 717 aa11.16□□□□□ -0.62
ATXN2-220ENST00000550236 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
ATXN2-220ENST00000550236 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
ATXN2-220ENST00000550236 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
ATXN2-220ENST00000550236 GNAT3A8MTJ3 354 aa11.15□□□□□ -0.62
ATXN2-220ENST00000550236 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
ATXN2-220ENST00000550236 DNAJC10Q8IXB1 793 aa11.15□□□□□ -0.62
ATXN2-220ENST00000550236 NLGN2Q8NFZ4 835 aa11.15□□□□□ -0.62
ATXN2-220ENST00000550236 MAP3K5Q99683 1374 aa11.15□□□□□ -0.63
ATXN2-220ENST00000550236 TEFQ10587 303 aa11.14□□□□□ -0.63
ATXN2-220ENST00000550236 FLAD1Q8NFF5 587 aa11.14□□□□□ -0.63
ATXN2-220ENST00000550236 GAS2L2Q8NHY3 880 aa11.14□□□□□ -0.63
ATXN2-220ENST00000550236 RTCBQ9Y3I0 505 aaKnown RBP11.14□□□□□ -0.63
ATXN2-220ENST00000550236 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
ATXN2-220ENST00000550236 ATXN8OSP0DMR3 200 aa11.13□□□□□ -0.63
ATXN2-220ENST00000550236 CRKLP46109 303 aaKnown RBP11.13□□□□□ -0.63
ATXN2-220ENST00000550236 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
ATXN2-220ENST00000550236 MCM10Q7L590 875 aa11.13□□□□□ -0.63
ATXN2-220ENST00000550236 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
ATXN2-220ENST00000550236 SIPA1L3O60292 1781 aaPredicted RBP11.13□□□□□ -0.63
ATXN2-220ENST00000550236 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 ADAMTS7Q9UKP4 1686 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 KCNQ3O43525 872 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 SSFA2P28290 1259 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 GPR162Q16538 588 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
ATXN2-220ENST00000550236 SRP68Q9UHB9 627 aaKnown RBP11.12□□□□□ -0.63
ATXN2-220ENST00000550236 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
ATXN2-220ENST00000550236 FCHSD2O94868 740 aa11.11□□□□□ -0.63
ATXN2-220ENST00000550236 RFC4P35249 363 aa11.11□□□□□ -0.63
ATXN2-220ENST00000550236 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
ATXN2-220ENST00000550236 TTC5Q8N0Z6 440 aa11.11□□□□□ -0.63
ATXN2-220ENST00000550236 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
ATXN2-220ENST00000550236 MRC1P22897 1456 aa11.11□□□□□ -0.63
ATXN2-220ENST00000550236 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
ATXN2-220ENST00000550236 KCPQ6ZWJ8 1503 aa11.1□□□□□ -0.63
ATXN2-220ENST00000550236 MMP10P09238 476 aa11.1□□□□□ -0.63
ATXN2-220ENST00000550236 HMGB2P26583 209 aaKnown RBP11.1□□□□□ -0.63
ATXN2-220ENST00000550236 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
ATXN2-220ENST00000550236 RC3H1Q5TC82 1133 aaKnown RBP11.1□□□□□ -0.63
ATXN2-220ENST00000550236 ZNF496Q96IT1 587 aaPredicted RBP11.1□□□□□ -0.63
ATXN2-220ENST00000550236 MIS18AQ9NYP9 233 aa11.1□□□□□ -0.63
ATXN2-220ENST00000550236 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
ATXN2-220ENST00000550236 CNTNAP4Q9C0A0 1308 aa11.09□□□□□ -0.63
ATXN2-220ENST00000550236 N4BP2Q86UW6 1770 aaPredicted RBP11.09□□□□□ -0.63
ATXN2-220ENST00000550236 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
ATXN2-220ENST00000550236 NEFMP07197 916 aa11.09□□□□□ -0.63
ATXN2-220ENST00000550236 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms