RNA–Protein interactions for RNA: ENST00000549938.5

TMPO-209, Transcript of thymopoietin, humanhuman

TSL 4

Gene TMPO, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPO-209ENST00000549938 AMIGO3Q86WK7 504 aa28.73■■■□□ 2.19
TMPO-209ENST00000549938 CABP4P57796 275 aa28.72■■■□□ 2.19
TMPO-209ENST00000549938 ITPK1Q13572 414 aa28.72■■■□□ 2.19
TMPO-209ENST00000549938 RBM42Q9BTD8 480 aaKnown RBP28.72■■■□□ 2.19
TMPO-209ENST00000549938 C4BP0C0L5 1744 aa28.72■■■□□ 2.19
TMPO-209ENST00000549938 GNPATO15228 680 aa28.71■■■□□ 2.19
TMPO-209ENST00000549938 MTHFSP49914 203 aa28.71■■■□□ 2.19
TMPO-209ENST00000549938 ZNF784Q8NCA9 323 aaPredicted RBP28.71■■■□□ 2.19
TMPO-209ENST00000549938 SSFA2P28290 1259 aa28.7■■■□□ 2.18
TMPO-209ENST00000549938 COL24A1Q17RW2 1714 aa28.69■■■□□ 2.18
TMPO-209ENST00000549938 TAF1LQ8IZX4 1826 aa28.69■■■□□ 2.18
TMPO-209ENST00000549938 IL13P35225 146 aa28.69■■■□□ 2.18
TMPO-209ENST00000549938 CC2D1BQ5T0F9 858 aaKnown RBP28.68■■■□□ 2.18
TMPO-209ENST00000549938 CNGB1Q14028 1251 aaPredicted RBP28.67■■■□□ 2.18
TMPO-209ENST00000549938 CD2APQ9Y5K6 639 aa28.66■■■□□ 2.18
TMPO-209ENST00000549938 GRIN3BO60391 1043 aa28.63■■■□□ 2.17
TMPO-209ENST00000549938 RTCBQ9Y3I0 505 aaKnown RBP28.63■■■□□ 2.17
TMPO-209ENST00000549938 KDM6AO15550 1401 aaPredicted RBP28.62■■■□□ 2.17
TMPO-209ENST00000549938 PER1O15534 1290 aaPredicted RBP28.62■■■□□ 2.17
TMPO-209ENST00000549938 YBX3P16989 372 aaKnown RBP eCLIP28.62■■■□□ 2.17
TMPO-209ENST00000549938 NFATC2IPQ8NCF5 419 aa28.62■■■□□ 2.17
TMPO-209ENST00000549938 SLC4A9Q96Q91 983 aa28.62■■■□□ 2.17
TMPO-209ENST00000549938 GOLGB1Q14789 3259 aaKnown RBP28.61■■■□□ 2.17
TMPO-209ENST00000549938 PTCD1O75127 700 aaKnown RBP28.61■■■□□ 2.17
TMPO-209ENST00000549938 TRAPPC3LQ5T215 181 aa28.61■■■□□ 2.17
TMPO-209ENST00000549938 HMOX1P09601 288 aa28.6■■■□□ 2.17
TMPO-209ENST00000549938 KDRP35968 1356 aa28.6■■■□□ 2.17
TMPO-209ENST00000549938 UBR3Q6ZT12 1888 aa28.58■■■□□ 2.17
TMPO-209ENST00000549938 CHD4Q14839 1912 aa28.57■■■□□ 2.16
TMPO-209ENST00000549938 DIAPH1O60610 1272 aaKnown RBP28.57■■■□□ 2.16
TMPO-209ENST00000549938 AKAP4Q5JQC9 854 aa28.57■■■□□ 2.16
TMPO-209ENST00000549938 RC3H1Q5TC82 1133 aaKnown RBP28.57■■■□□ 2.16
TMPO-209ENST00000549938 MMP10P09238 476 aa28.54■■■□□ 2.16
TMPO-209ENST00000549938 RFC4P35249 363 aa28.54■■■□□ 2.16
TMPO-209ENST00000549938 WWC3Q9ULE0 1092 aa28.54■■■□□ 2.16
TMPO-209ENST00000549938 ARHGEF1Q92888 912 aaKnown RBP28.53■■■□□ 2.16
TMPO-209ENST00000549938 CNTNAP4Q9C0A0 1308 aa28.52■■■□□ 2.16
TMPO-209ENST00000549938 RPS6KA4O75676 772 aa28.52■■■□□ 2.16
TMPO-209ENST00000549938 ADRA2BP18089 450 aa28.52■■■□□ 2.16
TMPO-209ENST00000549938 NLGN1Q8N2Q7 840 aa28.52■■■□□ 2.16
TMPO-209ENST00000549938 LGR6Q9HBX8 967 aa28.51■■■□□ 2.15
TMPO-209ENST00000549938 SLC52A2Q9HAB3 445 aa28.49■■■□□ 2.15
TMPO-209ENST00000549938 U2SURPO15042 1029 aaKnown RBP28.48■■■□□ 2.15
TMPO-209ENST00000549938 RNMTO43148 476 aaKnown RBP28.48■■■□□ 2.15
TMPO-209ENST00000549938 CRKLP46109 303 aaKnown RBP28.48■■■□□ 2.15
TMPO-209ENST00000549938 MTHFSDQ2M296 383 aaKnown RBP28.48■■■□□ 2.15
TMPO-209ENST00000549938 GYS1P13807 737 aa28.45■■■□□ 2.14
TMPO-209ENST00000549938 NPC1L1Q9UHC9 1359 aa28.45■■■□□ 2.14
TMPO-209ENST00000549938 SLC39A6Q13433 755 aa28.44■■■□□ 2.14
TMPO-209ENST00000549938 PARP3Q9Y6F1 533 aa28.44■■■□□ 2.14
TMPO-209ENST00000549938 ZNF831Q5JPB2 1677 aa28.42■■■□□ 2.14
TMPO-209ENST00000549938 DNAJC10Q8IXB1 793 aa28.42■■■□□ 2.14
TMPO-209ENST00000549938 CCDC87Q9NVE4 849 aa28.42■■■□□ 2.14
TMPO-209ENST00000549938 GIGYF1O75420 1035 aaPredicted RBP28.41■■■□□ 2.14
TMPO-209ENST00000549938 SRP68Q9UHB9 627 aaKnown RBP28.41■■■□□ 2.14
TMPO-209ENST00000549938 C1QTNF8P60827 252 aa28.4■■■□□ 2.14
TMPO-209ENST00000549938 INTS5Q6P9B9 1019 aaKnown RBP28.39■■■□□ 2.14
TMPO-209ENST00000549938 COL5A3P25940 1745 aaPredicted RBP28.38■■■□□ 2.13
TMPO-209ENST00000549938 TGFB2P61812 414 aa28.38■■■□□ 2.13
TMPO-209ENST00000549938 CFAP53Q96M91 514 aa28.38■■■□□ 2.13
TMPO-209ENST00000549938 SCN11AQ9UI33 1791 aa28.37■■■□□ 2.13
TMPO-209ENST00000549938 A0A0G2JLW4 131 aa28.37■■■□□ 2.13
TMPO-209ENST00000549938 CICQ96RK0 1608 aaPredicted RBP28.36■■■□□ 2.13
TMPO-209ENST00000549938 ZPR1O75312 459 aa28.35■■■□□ 2.13
TMPO-209ENST00000549938 FKBP8Q14318 412 aa28.35■■■□□ 2.13
TMPO-209ENST00000549938 GAS2L2Q8NHY3 880 aa28.35■■■□□ 2.13
TMPO-209ENST00000549938 USP42Q9H9J4 1324 aaKnown RBP28.35■■■□□ 2.13
TMPO-209ENST00000549938 MYH14Q7Z406 1995 aaKnown RBP28.35■■■□□ 2.13
TMPO-209ENST00000549938 CYP19A1P11511 503 aaPredicted RBP28.34■■■□□ 2.13
TMPO-209ENST00000549938 TEFQ10587 303 aa28.34■■■□□ 2.13
TMPO-209ENST00000549938 TTC5Q8N0Z6 440 aa28.34■■■□□ 2.13
TMPO-209ENST00000549938 BCS1LQ9Y276 419 aa28.34■■■□□ 2.13
TMPO-209ENST00000549938 GNAT3A8MTJ3 354 aa28.33■■■□□ 2.13
TMPO-209ENST00000549938 ATP10DQ9P241 1426 aa28.33■■■□□ 2.13
TMPO-209ENST00000549938 COL3A1P02461 1466 aaPredicted RBP28.33■■■□□ 2.13
TMPO-209ENST00000549938 SENP3-EIF4A1A0A087X0R7 540 aa28.32■■■□□ 2.12
TMPO-209ENST00000549938 DPEP1P16444 411 aa28.32■■■□□ 2.12
TMPO-209ENST00000549938 PXDNLA1KZ92 1463 aa28.32■■■□□ 2.12
TMPO-209ENST00000549938 ZNF526Q8TF50 670 aaPredicted RBP28.31■■■□□ 2.12
TMPO-209ENST00000549938 NUDCQ9Y266 331 aa28.31■■■□□ 2.12
TMPO-209ENST00000549938 C10orf71Q711Q0 1435 aa28.31■■■□□ 2.12
TMPO-209ENST00000549938 MRC1P22897 1456 aa28.31■■■□□ 2.12
TMPO-209ENST00000549938 TJP1Q07157 1748 aa28.3■■■□□ 2.12
TMPO-209ENST00000549938 SOS1Q07889 1333 aaPredicted RBP28.3■■■□□ 2.12
TMPO-209ENST00000549938 USPL1Q5W0Q7 1092 aa28.3■■■□□ 2.12
TMPO-209ENST00000549938 GPBP1L1Q9HC44 474 aaPredicted RBP28.3■■■□□ 2.12
TMPO-209ENST00000549938 VSIG10Q8N0Z9 540 aa28.29■■■□□ 2.12
TMPO-209ENST00000549938 IL17REQ8NFR9 667 aa28.29■■■□□ 2.12
TMPO-209ENST00000549938 FCHSD2O94868 740 aa28.28■■■□□ 2.12
TMPO-209ENST00000549938 PRKAR2BP31323 418 aa28.28■■■□□ 2.12
TMPO-209ENST00000549938 DDR1Q08345 913 aa28.28■■■□□ 2.12
TMPO-209ENST00000549938 ZBTB1Q9Y2K1 713 aa28.28■■■□□ 2.12
TMPO-209ENST00000549938 C4AP0C0L4 1744 aa28.27■■■□□ 2.12
TMPO-209ENST00000549938 STARD3NLO95772 234 aa28.27■■■□□ 2.12
TMPO-209ENST00000549938 CANXP27824 592 aaKnown RBP28.27■■■□□ 2.12
TMPO-209ENST00000549938 ARHGAP27Q6ZUM4 889 aa28.27■■■□□ 2.12
TMPO-209ENST00000549938 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
TMPO-209ENST00000549938 PPP2R1AP30153 589 aa28.26■■■□□ 2.11
TMPO-209ENST00000549938 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.111e-8■■■■■ 31.9
TMPO-209ENST00000549938 PHACTR3Q96KR7 559 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms