RNA–Protein interactions for RNA: ENST00000549858.1

AC133555.3-203, humanhuman

APPRIS ALT2 TSL 2

Gene AC133555.3, Length 397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133555.3-203ENST00000549858 MRC1P22897 1456 aa25.33■■□□□ 1.65
AC133555.3-203ENST00000549858 NUP188Q5SRE5 1749 aa25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 TMPOP42166 694 aaKnown RBP25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 KCNQ4P56696 695 aa25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 DCTN1Q14203 1278 aa25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 MCM10Q7L590 875 aa25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 RTF1Q92541 710 aaKnown RBP25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 LY75O60449 1722 aa25.32■■□□□ 1.64
AC133555.3-203ENST00000549858 CEMIPQ8WUJ3 1361 aa25.31■■□□□ 1.64
AC133555.3-203ENST00000549858 SLC27A3Q5K4L6 730 aa25.3■■□□□ 1.64
AC133555.3-203ENST00000549858 RRP7AQ9Y3A4 280 aaKnown RBP25.3■■□□□ 1.64
AC133555.3-203ENST00000549858 DLG5Q8TDM6 1919 aa25.29■■□□□ 1.64
AC133555.3-203ENST00000549858 RIPK4P57078 832 aa25.29■■□□□ 1.64
AC133555.3-203ENST00000549858 TEFQ10587 303 aa25.29■■□□□ 1.64
AC133555.3-203ENST00000549858 CCNL1Q9UK58 526 aaPredicted RBP25.29■■□□□ 1.64
AC133555.3-203ENST00000549858 LOC102724428A0A0B4J2F2 783 aa25.26■■□□□ 1.63
AC133555.3-203ENST00000549858 SIK1P57059 783 aa25.26■■□□□ 1.63
AC133555.3-203ENST00000549858 SLC39A6Q13433 755 aa25.26■■□□□ 1.63
AC133555.3-203ENST00000549858 NEUROD2Q15784 382 aa25.26■■□□□ 1.63
AC133555.3-203ENST00000549858 NBPF14Q5TI25 921 aa25.26■■□□□ 1.63
AC133555.3-203ENST00000549858 ANO8Q9HCE9 1232 aaPredicted RBP25.26■■□□□ 1.63
AC133555.3-203ENST00000549858 APAF1O14727 1248 aa25.25■■□□□ 1.63
AC133555.3-203ENST00000549858 THUMPD2Q9BTF0 503 aaKnown RBP25.25■■□□□ 1.63
AC133555.3-203ENST00000549858 CCER2I3L3R5 266 aa25.24■■□□□ 1.63
AC133555.3-203ENST00000549858 FAM9BQ8IZU0 186 aa25.24■■□□□ 1.63
AC133555.3-203ENST00000549858 MIER1Q8N108 512 aa25.24■■□□□ 1.63
AC133555.3-203ENST00000549858 SLC4A9Q96Q91 983 aa25.24■■□□□ 1.63
AC133555.3-203ENST00000549858 RBM42Q9BTD8 480 aaKnown RBP25.24■■□□□ 1.63
AC133555.3-203ENST00000549858 SIPA1L3O60292 1781 aaPredicted RBP25.23■■□□□ 1.63
AC133555.3-203ENST00000549858 PTCD1O75127 700 aaKnown RBP25.23■■□□□ 1.63
AC133555.3-203ENST00000549858 ATP6V1AP38606 617 aa25.22■■□□□ 1.63
AC133555.3-203ENST00000549858 R3HDM1Q15032 1099 aaKnown RBP25.22■■□□□ 1.63
AC133555.3-203ENST00000549858 TRIM35Q9UPQ4 493 aa25.22■■□□□ 1.63
AC133555.3-203ENST00000549858 PAPPAQ13219 1627 aa25.22■■□□□ 1.63
AC133555.3-203ENST00000549858 PSDA5PKW4 1024 aaPredicted RBP25.21■■□□□ 1.63
AC133555.3-203ENST00000549858 LMOD3Q0VAK6 560 aa25.21■■□□□ 1.63
AC133555.3-203ENST00000549858 ITPK1Q13572 414 aa25.21■■□□□ 1.63
AC133555.3-203ENST00000549858 STK32BQ9NY57 414 aa25.21■■□□□ 1.63
AC133555.3-203ENST00000549858 BTBD11A6QL63 1104 aa25.2■■□□□ 1.62
AC133555.3-203ENST00000549858 TAF7Q15545 349 aaPredicted RBP25.2■■□□□ 1.62
AC133555.3-203ENST00000549858 SLC15A2Q16348 729 aa25.2■■□□□ 1.62
AC133555.3-203ENST00000549858 ZNF827Q17R98 1081 aa25.19■■□□□ 1.62
AC133555.3-203ENST00000549858 AKT1S1Q96B36 256 aa25.19■■□□□ 1.62
AC133555.3-203ENST00000549858 KCNQ3O43525 872 aa25.18■■□□□ 1.62
AC133555.3-203ENST00000549858 ZNF790Q6PG37 636 aa25.18■■□□□ 1.62
AC133555.3-203ENST00000549858 KCPQ6ZWJ8 1503 aa25.17■■□□□ 1.62
AC133555.3-203ENST00000549858 SENP3-EIF4A1A0A087X0R7 540 aa25.17■■□□□ 1.62
AC133555.3-203ENST00000549858 TTC5Q8N0Z6 440 aa25.17■■□□□ 1.62
AC133555.3-203ENST00000549858 LINC00116Q8NCU8 138 aa25.17■■□□□ 1.62
AC133555.3-203ENST00000549858 MIS18AQ9NYP9 233 aa25.17■■□□□ 1.62
AC133555.3-203ENST00000549858 TAF1LQ8IZX4 1826 aa25.16■■□□□ 1.62
AC133555.3-203ENST00000549858 C5P01031 1676 aa25.16■■□□□ 1.62
AC133555.3-203ENST00000549858 ZNF496Q96IT1 587 aaPredicted RBP25.15■■□□□ 1.62
AC133555.3-203ENST00000549858 ZNF831Q5JPB2 1677 aa25.14■■□□□ 1.62
AC133555.3-203ENST00000549858 HMGB2P26583 209 aaKnown RBP25.14■■□□□ 1.62
AC133555.3-203ENST00000549858 UBR2Q8IWV8 1755 aa25.13■■□□□ 1.61
AC133555.3-203ENST00000549858 DNAJC10Q8IXB1 793 aa25.12■■□□□ 1.61
AC133555.3-203ENST00000549858 C4BP0C0L5 1744 aa25.12■■□□□ 1.61
AC133555.3-203ENST00000549858 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
AC133555.3-203ENST00000549858 FMNL2Q96PY5 1086 aa25.11■■□□□ 1.61
AC133555.3-203ENST00000549858 TFCP2L1Q9NZI6 479 aa25.11■■□□□ 1.61
AC133555.3-203ENST00000549858 TJP1Q07157 1748 aa25.1■■□□□ 1.61
AC133555.3-203ENST00000549858 PDGFDQ9GZP0 370 aaPredicted RBP25.1■■□□□ 1.61
AC133555.3-203ENST00000549858 HEG1Q9ULI3 1381 aa25.09■■□□□ 1.61
AC133555.3-203ENST00000549858 AK7Q96M32 723 aa25.09■■□□□ 1.61
AC133555.3-203ENST00000549858 CICQ96RK0 1608 aaPredicted RBP25.08■■□□□ 1.6
AC133555.3-203ENST00000549858 COL5A3P25940 1745 aaPredicted RBP25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 CCDC27Q2M243 656 aa25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 NCBP3Q53F19 620 aaKnown RBP25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 RC3H1Q5TC82 1133 aaKnown RBP25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 AMIGO3Q86WK7 504 aa25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 TSPYL4Q9UJ04 414 aa25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 KDM3BQ7LBC6 1761 aa25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 PNPLA7Q6ZV29 1317 aa25.07■■□□□ 1.6
AC133555.3-203ENST00000549858 CYP19A1P11511 503 aaPredicted RBP25.06■■□□□ 1.6
AC133555.3-203ENST00000549858 SMIM5Q71RC9 77 aa25.06■■□□□ 1.6
AC133555.3-203ENST00000549858 BABAM1Q9NWV8 329 aa25.06■■□□□ 1.6
AC133555.3-203ENST00000549858 SALL2Q9Y467 1007 aaPredicted RBP25.06■■□□□ 1.6
AC133555.3-203ENST00000549858 LAS1LQ9Y4W2 734 aaKnown RBP25.06■■□□□ 1.6
AC133555.3-203ENST00000549858 CNTNAP4Q9C0A0 1308 aa25.06■■□□□ 1.6
AC133555.3-203ENST00000549858 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
AC133555.3-203ENST00000549858 CHL1O00533 1208 aa25.05■■□□□ 1.6
AC133555.3-203ENST00000549858 CRKLP46109 303 aaKnown RBP25.05■■□□□ 1.6
AC133555.3-203ENST00000549858 EIF4A1P60842 406 aaKnown RBP25.05■■□□□ 1.6
AC133555.3-203ENST00000549858 WWC1Q8IX03 1113 aa25.05■■□□□ 1.6
AC133555.3-203ENST00000549858 PRAMEF22A3QJZ6 481 aa25.04■■□□□ 1.6
AC133555.3-203ENST00000549858 GNPATO15228 680 aa25.04■■□□□ 1.6
AC133555.3-203ENST00000549858 INTS5Q6P9B9 1019 aaKnown RBP25.04■■□□□ 1.6
AC133555.3-203ENST00000549858 QSER1Q2KHR3 1735 aa25.03■■□□□ 1.6
AC133555.3-203ENST00000549858 COL23A1Q86Y22 540 aaPredicted RBP25.03■■□□□ 1.6
AC133555.3-203ENST00000549858 TEX13AQ9BXU3 409 aaPredicted RBP25.03■■□□□ 1.6
AC133555.3-203ENST00000549858 MYH14Q7Z406 1995 aaKnown RBP25.03■■□□□ 1.6
AC133555.3-203ENST00000549858 CASZ1Q86V15 1759 aa25.03■■□□□ 1.6
AC133555.3-203ENST00000549858 SNRPA1P09661 255 aaKnown RBP25.02■■□□□ 1.6
AC133555.3-203ENST00000549858 CALD1Q05682 793 aaKnown RBP25.02■■□□□ 1.6
AC133555.3-203ENST00000549858 CFAP44Q96MT7 982 aa25.02■■□□□ 1.6
AC133555.3-203ENST00000549858 UBR3Q6ZT12 1888 aa25.02■■□□□ 1.6
AC133555.3-203ENST00000549858 RPS6KA4O75676 772 aa25.01■■□□□ 1.59
AC133555.3-203ENST00000549858 PHF14O94880 888 aa25.01■■□□□ 1.59
AC133555.3-203ENST00000549858 ZNF853P0CG23 659 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms