RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 KDRP35968 1356 aa16.79■□□□□ 0.28
SLC38A1-204ENST00000546893 PTPRUQ92729 1446 aa16.79■□□□□ 0.28
SLC38A1-204ENST00000546893 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
SLC38A1-204ENST00000546893 FLT4P35916 1363 aa16.79■□□□□ 0.28
SLC38A1-204ENST00000546893 ROBO2Q9HCK4 1378 aa16.79■□□□□ 0.28
SLC38A1-204ENST00000546893 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 ACEP12821 1306 aa16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 CCDC173Q0VFZ6 552 aa16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 RIMS1Q86UR5 1692 aaKnown RBP16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 CHMP4AQ9BY43 222 aa16.78■□□□□ 0.28
SLC38A1-204ENST00000546893 MSH6P52701 1360 aa16.77■□□□□ 0.28
SLC38A1-204ENST00000546893 GTPBP4Q9BZE4 634 aaKnown RBP16.77■□□□□ 0.28
SLC38A1-204ENST00000546893 FMN2Q9NZ56 1722 aa16.77■□□□□ 0.27
SLC38A1-204ENST00000546893 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
SLC38A1-204ENST00000546893 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
SLC38A1-204ENST00000546893 ERC2O15083 957 aa16.76■□□□□ 0.27
SLC38A1-204ENST00000546893 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
SLC38A1-204ENST00000546893 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
SLC38A1-204ENST00000546893 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
SLC38A1-204ENST00000546893 GNAI3P08754 354 aa16.75■□□□□ 0.27
SLC38A1-204ENST00000546893 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 SDSP20132 328 aa16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 SRCIN1Q9C0H9 1055 aa16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 CYP2E1P05181 493 aaPredicted RBP16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 STK31Q9BXU1 1019 aa16.74■□□□□ 0.27
SLC38A1-204ENST00000546893 USP54Q70EL1 1684 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 AOX1Q06278 1338 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 GNAI2P04899 355 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 MCCP23508 829 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 AEBP1Q8IUX7 1158 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 ANAPC15P60006 121 aa16.73■□□□□ 0.27
SLC38A1-204ENST00000546893 IGSF1Q8N6C5 1336 aa16.72■□□□□ 0.27
SLC38A1-204ENST00000546893 ANKARQ7Z5J8 1434 aa16.72■□□□□ 0.27
SLC38A1-204ENST00000546893 SLIT1O75093 1534 aa16.72■□□□□ 0.27
SLC38A1-204ENST00000546893 ZNF445P59923 1031 aa16.72■□□□□ 0.27
SLC38A1-204ENST00000546893 TSPYL4Q9UJ04 414 aa16.72■□□□□ 0.27
SLC38A1-204ENST00000546893 CACNA1FO60840 1977 aa16.72■□□□□ 0.27
SLC38A1-204ENST00000546893 ZNF500O60304 480 aaPredicted RBP16.71■□□□□ 0.27
SLC38A1-204ENST00000546893 IL17RAQ96F46 866 aa16.71■□□□□ 0.27
SLC38A1-204ENST00000546893 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
SLC38A1-204ENST00000546893 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
SLC38A1-204ENST00000546893 MCM10Q7L590 875 aa16.71■□□□□ 0.27
SLC38A1-204ENST00000546893 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 XPCQ01831 940 aaPredicted RBP16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 MEIS3Q99687 375 aa16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 DDX49Q9Y6V7 483 aaKnown RBP16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 SSFA2P28290 1259 aa16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
SLC38A1-204ENST00000546893 HS1BP3Q53T59 392 aa16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 NCKAP5LQ9HCH0 1330 aa16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 ZBTB22O15209 634 aa16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 PDE1AP54750 535 aa16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
SLC38A1-204ENST00000546893 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
SLC38A1-204ENST00000546893 FER1L4A9Z1Z3 1794 aa16.68■□□□□ 0.26
SLC38A1-204ENST00000546893 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 INTS4Q96HW7 963 aaKnown RBP16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 NOL7Q9UMY1 257 aaKnown RBP16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 FAM208AQ9UK61 1670 aaKnown RBP16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 CBX1P83916 185 aa16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 C16orf71Q8IYS4 520 aaPredicted RBP16.67■□□□□ 0.26
SLC38A1-204ENST00000546893 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
SLC38A1-204ENST00000546893 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
SLC38A1-204ENST00000546893 MBD3O95983 291 aa16.65■□□□□ 0.26
SLC38A1-204ENST00000546893 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
SLC38A1-204ENST00000546893 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
SLC38A1-204ENST00000546893 GNAT3A8MTJ3 354 aa16.65■□□□□ 0.26
SLC38A1-204ENST00000546893 AMPHP49418 695 aa16.65■□□□□ 0.26
SLC38A1-204ENST00000546893 RAB11FIP3O75154 756 aa16.64■□□□□ 0.25
SLC38A1-204ENST00000546893 XRN1Q8IZH2 1706 aaKnown RBP16.64■□□□□ 0.25
SLC38A1-204ENST00000546893 HOXB7P09629 217 aa16.64■□□□□ 0.25
SLC38A1-204ENST00000546893 LMBRD1Q9NUN5 540 aa16.64■□□□□ 0.25
SLC38A1-204ENST00000546893 MX1P20591 662 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 FLIIQ13045 1269 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 CUL4AQ13619 759 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 ESYT1Q9BSJ8 1104 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
SLC38A1-204ENST00000546893 PIK3C2AO00443 1686 aa16.62■□□□□ 0.25
SLC38A1-204ENST00000546893 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
SLC38A1-204ENST00000546893 OTUD7AQ8TE49 926 aaPredicted RBP16.62■□□□□ 0.25
SLC38A1-204ENST00000546893 SMARCA5O60264 1052 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms