RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DCAF5Q96JK2 942 aa28.74■■■□□ 2.19
SCARB1-210ENST00000545493 AK7Q96M32 723 aa28.74■■■□□ 2.19
SCARB1-210ENST00000545493 HSP90AB1P08238 724 aaKnown RBP28.73■■■□□ 2.19
SCARB1-210ENST00000545493 YY1P25490 414 aa28.73■■■□□ 2.19
SCARB1-210ENST00000545493 ITPK1Q13572 414 aa28.73■■■□□ 2.19
SCARB1-210ENST00000545493 MSL1Q68DK7 614 aa28.73■■■□□ 2.19
SCARB1-210ENST00000545493 ERVV-2B6SEH9 535 aa28.72■■■□□ 2.19
SCARB1-210ENST00000545493 HMGB2P26583 209 aaKnown RBP28.72■■■□□ 2.19
SCARB1-210ENST00000545493 KLHL34Q8N239 644 aa28.71■■■□□ 2.19
SCARB1-210ENST00000545493 VIRMAQ69YN4 1812 aaKnown RBP28.71■■■□□ 2.19
SCARB1-210ENST00000545493 SMIM5Q71RC9 77 aa28.7■■■□□ 2.18
SCARB1-210ENST00000545493 FLAD1Q8NFF5 587 aa28.7■■■□□ 2.18
SCARB1-210ENST00000545493 CICQ96RK0 1608 aaPredicted RBP28.69■■■□□ 2.18
SCARB1-210ENST00000545493 MRC1P22897 1456 aa28.68■■■□□ 2.18
SCARB1-210ENST00000545493 PHF14O94880 888 aa28.68■■■□□ 2.18
SCARB1-210ENST00000545493 ATP6V1AP38606 617 aa28.68■■■□□ 2.18
SCARB1-210ENST00000545493 SLC4A9Q96Q91 983 aa28.68■■■□□ 2.18
SCARB1-210ENST00000545493 ADAMTS7Q9UKP4 1686 aa28.67■■■□□ 2.18
SCARB1-210ENST00000545493 TJP1Q07157 1748 aa28.67■■■□□ 2.18
SCARB1-210ENST00000545493 C1orf141Q5JVX7 400 aa28.67■■■□□ 2.18
SCARB1-210ENST00000545493 NLGN2Q8NFZ4 835 aa28.67■■■□□ 2.18
SCARB1-210ENST00000545493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.66■■■□□ 2.18
SCARB1-210ENST00000545493 SSFA2P28290 1259 aa28.66■■■□□ 2.18
SCARB1-210ENST00000545493 HMOX1P09601 288 aa28.64■■■□□ 2.18
SCARB1-210ENST00000545493 CABP4P57796 275 aa28.64■■■□□ 2.18
SCARB1-210ENST00000545493 CHD4Q14839 1912 aa28.64■■■□□ 2.18
SCARB1-210ENST00000545493 GNPATO15228 680 aa28.63■■■□□ 2.17
SCARB1-210ENST00000545493 C4AP0C0L4 1744 aa28.63■■■□□ 2.17
SCARB1-210ENST00000545493 DIAPH1O60610 1272 aaKnown RBP28.62■■■□□ 2.17
SCARB1-210ENST00000545493 CNGB1Q14028 1251 aaPredicted RBP28.62■■■□□ 2.17
SCARB1-210ENST00000545493 AKAP4Q5JQC9 854 aa28.6■■■□□ 2.17
SCARB1-210ENST00000545493 RBM42Q9BTD8 480 aaKnown RBP28.6■■■□□ 2.17
SCARB1-210ENST00000545493 MYH14Q7Z406 1995 aaKnown RBP28.6■■■□□ 2.17
SCARB1-210ENST00000545493 CNTNAP4Q9C0A0 1308 aa28.58■■■□□ 2.17
SCARB1-210ENST00000545493 NFATC2IPQ8NCF5 419 aa28.57■■■□□ 2.16
SCARB1-210ENST00000545493 GPR162Q16538 588 aa28.55■■■□□ 2.16
SCARB1-210ENST00000545493 MTHFSDQ2M296 383 aaKnown RBP28.55■■■□□ 2.16
SCARB1-210ENST00000545493 KCPQ6ZWJ8 1503 aa28.54■■■□□ 2.16
SCARB1-210ENST00000545493 UBR2Q8IWV8 1755 aa28.53■■■□□ 2.16
SCARB1-210ENST00000545493 LGR6Q9HBX8 967 aa28.53■■■□□ 2.16
SCARB1-210ENST00000545493 PTCD1O75127 700 aaKnown RBP28.52■■■□□ 2.16
SCARB1-210ENST00000545493 PELP1Q8IZL8 1130 aaKnown RBP28.52■■■□□ 2.16
SCARB1-210ENST00000545493 SLC52A2Q9HAB3 445 aa28.52■■■□□ 2.16
SCARB1-210ENST00000545493 CD2APQ9Y5K6 639 aa28.52■■■□□ 2.16
SCARB1-210ENST00000545493 RNMTO43148 476 aaKnown RBP28.51■■■□□ 2.15
SCARB1-210ENST00000545493 RC3H1Q5TC82 1133 aaKnown RBP28.51■■■□□ 2.15
SCARB1-210ENST00000545493 RTCBQ9Y3I0 505 aaKnown RBP28.51■■■□□ 2.15
SCARB1-210ENST00000545493 KIAA1551Q9HCM1 1747 aa28.5■■■□□ 2.15
SCARB1-210ENST00000545493 YBX3P16989 372 aaKnown RBP eCLIP28.5■■■□□ 2.15
SCARB1-210ENST00000545493 KIF13BQ9NQT8 1826 aa28.5■■■□□ 2.15
SCARB1-210ENST00000545493 SIPA1L3O60292 1781 aaPredicted RBP28.5■■■□□ 2.15
SCARB1-210ENST00000545493 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
SCARB1-210ENST00000545493 ADRA2BP18089 450 aa28.47■■■□□ 2.15
SCARB1-210ENST00000545493 TRAPPC3LQ5T215 181 aa28.47■■■□□ 2.15
SCARB1-210ENST00000545493 RPS6KA4O75676 772 aa28.46■■■□□ 2.15
SCARB1-210ENST00000545493 ZNF784Q8NCA9 323 aaPredicted RBP28.46■■■□□ 2.15
SCARB1-210ENST00000545493 ARHGEF1Q92888 912 aaKnown RBP28.46■■■□□ 2.15
SCARB1-210ENST00000545493 CRKLP46109 303 aaKnown RBP28.45■■■□□ 2.14
SCARB1-210ENST00000545493 SLC39A6Q13433 755 aa28.44■■■□□ 2.14
SCARB1-210ENST00000545493 MMP10P09238 476 aa28.43■■■□□ 2.14
SCARB1-210ENST00000545493 C10orf71Q711Q0 1435 aa28.43■■■□□ 2.14
SCARB1-210ENST00000545493 GYS1P13807 737 aa28.42■■■□□ 2.14
SCARB1-210ENST00000545493 PPP2R1AP30153 589 aa28.42■■■□□ 2.14
SCARB1-210ENST00000545493 DNAJC10Q8IXB1 793 aa28.41■■■□□ 2.14
SCARB1-210ENST00000545493 PXDNLA1KZ92 1463 aa28.4■■■□□ 2.14
SCARB1-210ENST00000545493 GAS2L2Q8NHY3 880 aa28.4■■■□□ 2.14
SCARB1-210ENST00000545493 CFAP53Q96M91 514 aa28.4■■■□□ 2.14
SCARB1-210ENST00000545493 RSPH6AQ9H0K4 717 aa28.4■■■□□ 2.14
SCARB1-210ENST00000545493 RFC4P35249 363 aa28.39■■■□□ 2.14
SCARB1-210ENST00000545493 INTS5Q6P9B9 1019 aaKnown RBP28.39■■■□□ 2.14
SCARB1-210ENST00000545493 N4BP2Q86UW6 1770 aaPredicted RBP28.39■■■□□ 2.13
SCARB1-210ENST00000545493 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
SCARB1-210ENST00000545493 GRIN3BO60391 1043 aa28.37■■■□□ 2.13
SCARB1-210ENST00000545493 PRKAR2BP31323 418 aa28.37■■■□□ 2.13
SCARB1-210ENST00000545493 NLGN1Q8N2Q7 840 aa28.37■■■□□ 2.13
SCARB1-210ENST00000545493 SRP68Q9UHB9 627 aaKnown RBP28.37■■■□□ 2.13
SCARB1-210ENST00000545493 CEMIPQ8WUJ3 1361 aa28.36■■■□□ 2.13
SCARB1-210ENST00000545493 GNAT3A8MTJ3 354 aa28.35■■■□□ 2.13
SCARB1-210ENST00000545493 IL17REQ8NFR9 667 aa28.35■■■□□ 2.13
SCARB1-210ENST00000545493 PHACTR3Q96KR7 559 aa28.35■■■□□ 2.13
SCARB1-210ENST00000545493 CCDC87Q9NVE4 849 aa28.35■■■□□ 2.13
SCARB1-210ENST00000545493 WWC3Q9ULE0 1092 aa28.35■■■□□ 2.13
SCARB1-210ENST00000545493 SOS1Q07889 1333 aaPredicted RBP28.35■■■□□ 2.13
SCARB1-210ENST00000545493 BRCA1P38398 1863 aaKnown RBP28.34■■■□□ 2.13
SCARB1-210ENST00000545493 CYP19A1P11511 503 aaPredicted RBP28.34■■■□□ 2.13
SCARB1-210ENST00000545493 ZBTB1Q9Y2K1 713 aa28.32■■■□□ 2.12
SCARB1-210ENST00000545493 FKBP8Q14318 412 aa28.31■■■□□ 2.12
SCARB1-210ENST00000545493 VSIG10Q8N0Z9 540 aa28.31■■■□□ 2.12
SCARB1-210ENST00000545493 COL15A1P39059 1388 aa28.31■■■□□ 2.12
SCARB1-210ENST00000545493 NUDCQ9Y266 331 aa28.3■■■□□ 2.12
SCARB1-210ENST00000545493 U2AF1L5P0DN76 240 aaPredicted RBP28.29■■■□□ 2.12
SCARB1-210ENST00000545493 U2AF1Q01081 240 aaKnown RBP eCLIP28.29■■■□□ 2.12
SCARB1-210ENST00000545493 DDR1Q08345 913 aa28.29■■■□□ 2.12
SCARB1-210ENST00000545493 TEFQ10587 303 aa28.29■■■□□ 2.12
SCARB1-210ENST00000545493 SCN7AQ01118 1682 aa28.29■■■□□ 2.12
SCARB1-210ENST00000545493 TTC5Q8N0Z6 440 aa28.28■■■□□ 2.12
SCARB1-210ENST00000545493 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
SCARB1-210ENST00000545493 ADCY9O60503 1353 aa28.27■■■□□ 2.12
SCARB1-210ENST00000545493 HEG1Q9ULI3 1381 aa28.27■■■□□ 2.12
SCARB1-210ENST00000545493 ZNF790Q6PG37 636 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms