RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 RAB11FIP3O75154 756 aa15.09■□□□□ 0.01
CHD4-211ENST00000544484 GPTP24298 496 aa15.09■□□□□ 0.01
CHD4-211ENST00000544484 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
CHD4-211ENST00000544484 LARP6Q9BRS8 491 aaKnown RBP15.09■□□□□ 0.01
CHD4-211ENST00000544484 C14orf93Q9H972 538 aaKnown RBP15.09■□□□□ 0.01
CHD4-211ENST00000544484 NOL7Q9UMY1 257 aaKnown RBP15.09■□□□□ 0.01
CHD4-211ENST00000544484 FLIIQ13045 1269 aa15.09■□□□□ 0.01
CHD4-211ENST00000544484 FAM177A1Q8N128 213 aaPredicted RBP15.09■□□□□ 0.01
CHD4-211ENST00000544484 AK7Q96M32 723 aa15.09■□□□□ 0.01
CHD4-211ENST00000544484 USP5P45974 858 aa15.08■□□□□ 0.01
CHD4-211ENST00000544484 IL27Q8NEV9 243 aa15.08■□□□□ 0.01
CHD4-211ENST00000544484 A0A087WZG4 1122 aa15.08■□□□□ 0.01
CHD4-211ENST00000544484 TANGO6Q9C0B7 1094 aa15.08■□□□□ 0.01
CHD4-211ENST00000544484 ANXA1P04083 346 aa15.08■□□□□ 0
CHD4-211ENST00000544484 CFAP45Q9UL16 551 aa15.08■□□□□ 0
CHD4-211ENST00000544484 TRMT112Q9UI30 125 aaKnown RBP15.08■□□□□ 0
CHD4-211ENST00000544484 NUP62CLQ9H1M0 184 aa15.08■□□□□ 0
CHD4-211ENST00000544484 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
CHD4-211ENST00000544484 CCDC82Q8N4S0 544 aa15.08■□□□□ 0
CHD4-211ENST00000544484 DBF4Q9UBU7 674 aaPredicted RBP15.08■□□□□ 0
CHD4-211ENST00000544484 AKAP2Q9Y2D5 859 aa15.08■□□□□ 0
CHD4-211ENST00000544484 FANCAO15360 1455 aa15.07■□□□□ 0
CHD4-211ENST00000544484 SCAF11Q99590 1463 aaKnown RBP15.07■□□□□ 0
CHD4-211ENST00000544484 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
CHD4-211ENST00000544484 CAMK4Q16566 473 aa15.07■□□□□ 0
CHD4-211ENST00000544484 ACEP12821 1306 aa15.07■□□□□ 0
CHD4-211ENST00000544484 ACBD3Q9H3P7 528 aa15.07■□□□□ 0
CHD4-211ENST00000544484 ZPR1O75312 459 aa15.07■□□□□ 0
CHD4-211ENST00000544484 PIP4K2AP48426 406 aaPredicted RBP15.07■□□□□ 0
CHD4-211ENST00000544484 CHRNA2Q15822 529 aa15.07■□□□□ 0
CHD4-211ENST00000544484 JARID2Q92833 1246 aaPredicted RBP15.07■□□□□ 0
CHD4-211ENST00000544484 CIZ1Q9ULV3 898 aaPredicted RBP15.07■□□□□ 0
CHD4-211ENST00000544484 RPRD2Q5VT52 1461 aaKnown RBP15.07■□□□□ 0
CHD4-211ENST00000544484 ATP5J2-PTCD1G3V325 749 aa15.07■□□□□ 0
CHD4-211ENST00000544484 PPFIBP1Q86W92 1011 aa15.07■□□□□ 0
CHD4-211ENST00000544484 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.07■□□□□ 09e-7■■■■■ 60.1
CHD4-211ENST00000544484 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
CHD4-211ENST00000544484 TSHZ3Q63HK5 1081 aa15.06■□□□□ 0
CHD4-211ENST00000544484 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
CHD4-211ENST00000544484 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
CHD4-211ENST00000544484 STIM1Q13586 685 aa15.06■□□□□ 0
CHD4-211ENST00000544484 FILIP1Q7Z7B0 1213 aa15.06■□□□□ 0
CHD4-211ENST00000544484 MBIPQ9NS73 344 aa15.06■□□□□ 0
CHD4-211ENST00000544484 GUCY1B3Q02153 619 aa15.06■□□□□ 0
CHD4-211ENST00000544484 ZNHIT6Q9NWK9 470 aaKnown RBP15.06■□□□□ 0
CHD4-211ENST00000544484 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
CHD4-211ENST00000544484 SYCE3A1L190 88 aa15.05■□□□□ 0
CHD4-211ENST00000544484 MAP3K2Q9Y2U5 619 aa15.05■□□□□ 0
CHD4-211ENST00000544484 LRPPRCP42704 1394 aaKnown RBP15.05■□□□□ 0
CHD4-211ENST00000544484 SYCP1Q15431 976 aa15.05■□□□□ 0
CHD4-211ENST00000544484 MPHOSPH10O00566 681 aaKnown RBP15.05■□□□□ -0
CHD4-211ENST00000544484 CAVIN4Q5BKX8 364 aa15.05■□□□□ -0
CHD4-211ENST00000544484 NAPBQ9H115 298 aa15.04■□□□□ -0
CHD4-211ENST00000544484 ANKIB1Q9P2G1 1089 aa15.04■□□□□ -0
CHD4-211ENST00000544484 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
CHD4-211ENST00000544484 DEF6Q9H4E7 631 aa15.04■□□□□ -0
CHD4-211ENST00000544484 HYPKQ9NX55 129 aa15.04■□□□□ -0
CHD4-211ENST00000544484 DACH1Q9UI36 760 aa15.04■□□□□ -0
CHD4-211ENST00000544484 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
CHD4-211ENST00000544484 PI4KAP2A4QPH2 592 aa15.04■□□□□ -0
CHD4-211ENST00000544484 PI4KAP1Q8N8J0 262 aa15.04■□□□□ -0
CHD4-211ENST00000544484 CDR1P51861 262 aa15.03■□□□□ -0
CHD4-211ENST00000544484 CEP57L1Q8IYX8 460 aa15.03■□□□□ -0
CHD4-211ENST00000544484 PDCL3Q9H2J4 239 aa15.03■□□□□ -0
CHD4-211ENST00000544484 THOC2Q8NI27 1593 aaKnown RBP15.03■□□□□ -0
CHD4-211ENST00000544484 POLR3DP05423 398 aaPredicted RBP15.03■□□□□ -0
CHD4-211ENST00000544484 SNRKQ9NRH2 765 aa15.03■□□□□ -0
CHD4-211ENST00000544484 DHX29Q7Z478 1369 aaKnown RBP15.03■□□□□ -0
CHD4-211ENST00000544484 MKNK2Q9HBH9 465 aa15.02■□□□□ -0
CHD4-211ENST00000544484 ZNF76P36508 570 aa15.02■□□□□ -0
CHD4-211ENST00000544484 NGLY1Q96IV0 654 aa15.02■□□□□ -0
CHD4-211ENST00000544484 EXOC5O00471 708 aa15.02□□□□□ -0.01
CHD4-211ENST00000544484 IGHDP01880 384 aa15.02□□□□□ -0.01
CHD4-211ENST00000544484 UBE3BQ7Z3V4 1068 aa15.02□□□□□ -0.01
CHD4-211ENST00000544484 CCP110O43303 1012 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 ANKRD24Q8TF21 1146 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 RANBP6O60518 1105 aaKnown RBP15.01□□□□□ -0.01
CHD4-211ENST00000544484 WASF1Q92558 559 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
CHD4-211ENST00000544484 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 NOM1Q5C9Z4 860 aaKnown RBP15.01□□□□□ -0.01
CHD4-211ENST00000544484 DZIP1Q86YF9 867 aaKnown RBP15.01□□□□□ -0.01
CHD4-211ENST00000544484 PTPRCP08575 1304 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 TTC21BQ7Z4L5 1316 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 PPFIA3O75145 1194 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 DHX8Q14562 1220 aaKnown RBP15.01□□□□□ -0.01
CHD4-211ENST00000544484 MAP3K11Q16584 847 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
CHD4-211ENST00000544484 ANKRD18BA2A2Z9 1011 aa15□□□□□ -0.01
CHD4-211ENST00000544484 CCT2P78371 535 aaKnown RBP15□□□□□ -0.01
CHD4-211ENST00000544484 BMP2KQ9NSY1 1161 aaPredicted RBP15□□□□□ -0.01
CHD4-211ENST00000544484 GOLIM4O00461 696 aa15□□□□□ -0.01
CHD4-211ENST00000544484 SSFA2P28290 1259 aa15□□□□□ -0.01
CHD4-211ENST00000544484 TBC1D2Q9BYX2 928 aa15□□□□□ -0.01
CHD4-211ENST00000544484 WWC2Q6AWC2 1192 aa15□□□□□ -0.01
CHD4-211ENST00000544484 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
CHD4-211ENST00000544484 ZNF213O14771 459 aa14.99□□□□□ -0.01
CHD4-211ENST00000544484 TBC1D9Q6ZT07 1266 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms