RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 NLRP2Q9NX02 1062 aa4.67□□□□□ -1.66
BRCA2-206ENST00000544455 PA2G4Q9UQ80 394 aaKnown RBP4.67□□□□□ -1.66
BRCA2-206ENST00000544455 KLHDC4Q8TBB5 520 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 ATP10DQ9P241 1426 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 MAP3K5Q99683 1374 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 CSB-PGBD3P0DP91 1061 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 RPAP2Q8IXW5 612 aaPredicted RBP4.66□□□□□ -1.66
BRCA2-206ENST00000544455 SIL1Q9H173 461 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 ARHGEF10O15013 1369 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 TEFQ10587 303 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 DDX54Q8TDD1 881 aaKnown RBP4.66□□□□□ -1.66
BRCA2-206ENST00000544455 PI4KAP2A4QPH2 592 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 EIF4A1P60842 406 aaKnown RBP4.66□□□□□ -1.66
BRCA2-206ENST00000544455 PI4KAP1Q8N8J0 262 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 SSFA2P28290 1259 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 ZGPATQ8N5A5 531 aaKnown RBP4.66□□□□□ -1.66
BRCA2-206ENST00000544455 USP44Q9H0E7 712 aa4.66□□□□□ -1.66
BRCA2-206ENST00000544455 NCLP19338 710 aaKnown RBP4.66□□□□□ -1.66
BRCA2-206ENST00000544455 SOS1Q07889 1333 aaPredicted RBP4.65□□□□□ -1.66
BRCA2-206ENST00000544455 ARHGAP23Q9P227 1491 aa4.65□□□□□ -1.66
BRCA2-206ENST00000544455 GNAI2P04899 355 aa4.65□□□□□ -1.66
BRCA2-206ENST00000544455 UBTFL1P0CB47 393 aaPredicted RBP4.65□□□□□ -1.66
BRCA2-206ENST00000544455 RBM25P49756 843 aaKnown RBP4.65□□□□□ -1.66
BRCA2-206ENST00000544455 PDE1AP54750 535 aa4.65□□□□□ -1.66
BRCA2-206ENST00000544455 IP6K1Q92551 441 aa4.65□□□□□ -1.66
BRCA2-206ENST00000544455 TNPO1Q92973 898 aaKnown RBP4.65□□□□□ -1.66
BRCA2-206ENST00000544455 PTPRCP08575 1304 aa4.65□□□□□ -1.66
BRCA2-206ENST00000544455 PANK2Q9BZ23 570 aa4.65□□□□□ -1.66
BRCA2-206ENST00000544455 PALD1Q9ULE6 856 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 ANO2Q9NQ90 1003 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 C3P01024 1663 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 KIAA0232Q92628 1395 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 SRGAP3O43295 1099 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 SLIT1O75093 1534 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 KIF13AQ9H1H9 1805 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 PXDNQ92626 1479 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 RNMTO43148 476 aaKnown RBP4.65□□□□□ -1.67
BRCA2-206ENST00000544455 SURF6O75683 361 aaKnown RBP4.65□□□□□ -1.67
BRCA2-206ENST00000544455 C1orf141Q5JVX7 400 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 LRRCC1Q9C099 1032 aa4.65□□□□□ -1.67
BRCA2-206ENST00000544455 OS9Q13438 667 aaPredicted RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 ZNF330Q9Y3S2 320 aaPredicted RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 SRCIN1Q9C0H9 1055 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 CHMP5Q9NZZ3 219 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 KIF20BQ96Q89 1820 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 USP26Q9BXU7 913 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 UPF3BQ9BZI7 483 aaKnown RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 MAP3K2Q9Y2U5 619 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 NDUFB9Q9Y6M9 179 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 MX1P20591 662 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 NRKQ7Z2Y5 1582 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 PPP1R42Q7Z4L9 355 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 K7ELQ4 463 aaPredicted RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 NFATC2IPQ8NCF5 419 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 CHMP4BQ9H444 224 aaKnown RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 ARHGEF25Q86VW2 580 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 KDRP35968 1356 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 CHGBP05060 677 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 CCT4P50991 539 aaKnown RBP4.64□□□□□ -1.67
BRCA2-206ENST00000544455 TRAK2O60296 914 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 HMMRO75330 724 aa4.64□□□□□ -1.67
BRCA2-206ENST00000544455 MCM4P33991 863 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 CPA1P15085 419 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 SPG7Q9UQ90 795 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 NPHP4O75161 1426 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 MCTP1Q6DN14 999 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 NEK4P51957 841 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 CWC27Q6UX04 472 aaKnown RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 DNAAF4Q8WXU2 420 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 AKAP4Q5JQC9 854 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 CCDC8Q9H0W5 538 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 TLR7Q9NYK1 1049 aaKnown RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 ATP5J2-PTCD1G3V325 749 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 PTCD1O75127 700 aaKnown RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 ATP8B2P98198 1209 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 GNAI3P08754 354 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 HAP1P54257 671 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 BEND3Q5T5X7 828 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 C9orf78Q9NZ63 289 aaPredicted RBP4.63□□□□□ -1.67
BRCA2-206ENST00000544455 PIK3C2AO00443 1686 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 NWD1Q149M9 1564 aa4.63□□□□□ -1.67
BRCA2-206ENST00000544455 PLEKHO1Q53GL0 409 aaPredicted RBP4.62□□□□□ -1.67
BRCA2-206ENST00000544455 CASC1Q6TDU7 716 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 ATF3P18847 181 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 ANKRD26Q9UPS8 1709 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 COL9A3Q14050 684 aaPredicted RBP4.62□□□□□ -1.67
BRCA2-206ENST00000544455 RHPN1Q8TCX5 695 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 RAPGEF4Q8WZA2 1011 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 KNDC1Q76NI1 1749 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 SUCLG2Q96I99 432 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 EDC3Q96F86 508 aaKnown RBP4.62□□□□□ -1.67
BRCA2-206ENST00000544455 USP16Q9Y5T5 823 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 A0A0G2JS52 829 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 KCNH5Q8NCM2 988 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 MYD88Q99836 296 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 ANKARQ7Z5J8 1434 aa4.62□□□□□ -1.67
BRCA2-206ENST00000544455 TMEM94Q12767 1356 aa4.61□□□□□ -1.67
BRCA2-206ENST00000544455 XRCC6P12956 609 aaKnown RBP eCLIP4.61□□□□□ -1.67
BRCA2-206ENST00000544455 HTATSF1O43719 755 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms