RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 SNX21Q969T3 373 aa17.13■□□□□ 0.33
LSM14A-203ENST00000544216 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
LSM14A-203ENST00000544216 UBTFL1P0CB47 393 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-203ENST00000544216 RILPL2Q969X0 211 aa17.12■□□□□ 0.33
LSM14A-203ENST00000544216 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-203ENST00000544216 PROSER2Q86WR7 435 aaPredicted RBP17.12■□□□□ 0.33
LSM14A-203ENST00000544216 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
LSM14A-203ENST00000544216 PIK3C2AO00443 1686 aa17.11■□□□□ 0.33
LSM14A-203ENST00000544216 GCP02774 474 aa17.11■□□□□ 0.33
LSM14A-203ENST00000544216 PDE1AP54750 535 aa17.11■□□□□ 0.33
LSM14A-203ENST00000544216 KCNH5Q8NCM2 988 aa17.11■□□□□ 0.33
LSM14A-203ENST00000544216 LRRCC1Q9C099 1032 aa17.11■□□□□ 0.33
LSM14A-203ENST00000544216 TRAK2O60296 914 aa17.1■□□□□ 0.33
LSM14A-203ENST00000544216 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
LSM14A-203ENST00000544216 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
LSM14A-203ENST00000544216 BTBD11A6QL63 1104 aa17.1■□□□□ 0.33
LSM14A-203ENST00000544216 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
LSM14A-203ENST00000544216 CHPF2Q9P2E5 772 aa17.1■□□□□ 0.33
LSM14A-203ENST00000544216 USP26Q9BXU7 913 aa17.09■□□□□ 0.33
LSM14A-203ENST00000544216 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
LSM14A-203ENST00000544216 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
LSM14A-203ENST00000544216 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
LSM14A-203ENST00000544216 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.33
LSM14A-203ENST00000544216 ATP8B2P98198 1209 aa17.08■□□□□ 0.33
LSM14A-203ENST00000544216 SRCIN1Q9C0H9 1055 aa17.08■□□□□ 0.32
LSM14A-203ENST00000544216 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
LSM14A-203ENST00000544216 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
LSM14A-203ENST00000544216 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
LSM14A-203ENST00000544216 REC8O95072 547 aa17.07■□□□□ 0.32
LSM14A-203ENST00000544216 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
LSM14A-203ENST00000544216 RABEP1Q15276 862 aa17.07■□□□□ 0.32
LSM14A-203ENST00000544216 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
LSM14A-203ENST00000544216 MX1P20591 662 aa17.06■□□□□ 0.32
LSM14A-203ENST00000544216 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
LSM14A-203ENST00000544216 ERC2O15083 957 aa17.06■□□□□ 0.32
LSM14A-203ENST00000544216 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
LSM14A-203ENST00000544216 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
LSM14A-203ENST00000544216 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
LSM14A-203ENST00000544216 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
LSM14A-203ENST00000544216 SRGAP3O43295 1099 aa17.05■□□□□ 0.32
LSM14A-203ENST00000544216 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
LSM14A-203ENST00000544216 NOL8Q76FK4 1167 aaKnown RBP17.05■□□□□ 0.32
LSM14A-203ENST00000544216 GBP4Q96PP9 640 aa17.05■□□□□ 0.32
LSM14A-203ENST00000544216 FMN2Q9NZ56 1722 aa17.05■□□□□ 0.32
LSM14A-203ENST00000544216 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
LSM14A-203ENST00000544216 XRN1Q8IZH2 1706 aaKnown RBP17.04■□□□□ 0.32
LSM14A-203ENST00000544216 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
LSM14A-203ENST00000544216 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
LSM14A-203ENST00000544216 SSFA2P28290 1259 aa17.04■□□□□ 0.32
LSM14A-203ENST00000544216 ANO2Q9NQ90 1003 aa17.04■□□□□ 0.32
LSM14A-203ENST00000544216 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
LSM14A-203ENST00000544216 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
LSM14A-203ENST00000544216 NLRP2Q9NX02 1062 aa17.03■□□□□ 0.32
LSM14A-203ENST00000544216 AXIN2Q9Y2T1 843 aa17.03■□□□□ 0.32
LSM14A-203ENST00000544216 GOLGA6L3A6NEY3 463 aa17.03■□□□□ 0.32
LSM14A-203ENST00000544216 DNAAF4Q8WXU2 420 aa17.03■□□□□ 0.32
LSM14A-203ENST00000544216 ARHGEF25Q86VW2 580 aa17.03■□□□□ 0.32
LSM14A-203ENST00000544216 ST18O60284 1047 aa17.02■□□□□ 0.32
LSM14A-203ENST00000544216 BABAM1Q9NWV8 329 aa17.02■□□□□ 0.32
LSM14A-203ENST00000544216 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.31
LSM14A-203ENST00000544216 CIZ1Q9ULV3 898 aaPredicted RBP17.02■□□□□ 0.31
LSM14A-203ENST00000544216 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
LSM14A-203ENST00000544216 CSB-PGBD3P0DP91 1061 aa17.01■□□□□ 0.31
LSM14A-203ENST00000544216 C9orf78Q9NZ63 289 aaPredicted RBP17.01■□□□□ 0.31
LSM14A-203ENST00000544216 NEK4P51957 841 aa17.01■□□□□ 0.31
LSM14A-203ENST00000544216 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
LSM14A-203ENST00000544216 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
LSM14A-203ENST00000544216 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
LSM14A-203ENST00000544216 FOXD4L5Q5VV16 416 aaPredicted RBP17■□□□□ 0.31
LSM14A-203ENST00000544216 FOXD4L4Q8WXT5 416 aaPredicted RBP17■□□□□ 0.31
LSM14A-203ENST00000544216 RAB3GAP1Q15042 981 aa17■□□□□ 0.31
LSM14A-203ENST00000544216 DDIT3P35638 169 aa17■□□□□ 0.31
LSM14A-203ENST00000544216 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
LSM14A-203ENST00000544216 NWD1Q149M9 1564 aa17■□□□□ 0.31
LSM14A-203ENST00000544216 CABLES1Q8TDN4 633 aa16.99■□□□□ 0.31
LSM14A-203ENST00000544216 PROSER3Q2NL68 480 aa16.99■□□□□ 0.31
LSM14A-203ENST00000544216 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
LSM14A-203ENST00000544216 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
LSM14A-203ENST00000544216 OSBPL3Q9H4L5 887 aa16.99■□□□□ 0.31
LSM14A-203ENST00000544216 MAP3K2Q9Y2U5 619 aa16.99■□□□□ 0.31
LSM14A-203ENST00000544216 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
LSM14A-203ENST00000544216 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
LSM14A-203ENST00000544216 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
LSM14A-203ENST00000544216 GOLGA6L22H0YM25 854 aa16.98■□□□□ 0.31
LSM14A-203ENST00000544216 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
LSM14A-203ENST00000544216 DBF4Q9UBU7 674 aaPredicted RBP16.98■□□□□ 0.31
LSM14A-203ENST00000544216 ATF3P18847 181 aa16.98■□□□□ 0.31
LSM14A-203ENST00000544216 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
LSM14A-203ENST00000544216 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
LSM14A-203ENST00000544216 ZGPATQ8N5A5 531 aaKnown RBP16.97■□□□□ 0.31
LSM14A-203ENST00000544216 RHPN1Q8TCX5 695 aa16.97■□□□□ 0.31
LSM14A-203ENST00000544216 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
LSM14A-203ENST00000544216 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
LSM14A-203ENST00000544216 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
LSM14A-203ENST00000544216 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
LSM14A-203ENST00000544216 MCCP23508 829 aa16.97■□□□□ 0.31
LSM14A-203ENST00000544216 SSH3Q8TE77 659 aa16.97■□□□□ 0.31
LSM14A-203ENST00000544216 CHMLP26374 656 aa16.96■□□□□ 0.31
LSM14A-203ENST00000544216 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
LSM14A-203ENST00000544216 MYL6BP14649 208 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms