RNA–Protein interactions for RNA: ENST00000543957.5

ITM2C-209, Transcript of integral membrane protein 2C, humanhuman

TSL 5

Gene ITM2C, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-209ENST00000543957 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
ITM2C-209ENST00000543957 CCDC87Q9NVE4 849 aa17.2■□□□□ 0.34
ITM2C-209ENST00000543957 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
ITM2C-209ENST00000543957 TMF1P82094 1093 aa17.19■□□□□ 0.34
ITM2C-209ENST00000543957 ITGB4P16144 1822 aa17.19■□□□□ 0.34
ITM2C-209ENST00000543957 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
ITM2C-209ENST00000543957 PUS7Q96PZ0 661 aaKnown RBP17.18■□□□□ 0.34
ITM2C-209ENST00000543957 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
ITM2C-209ENST00000543957 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
ITM2C-209ENST00000543957 KCNA3P22001 575 aa17.17■□□□□ 0.34
ITM2C-209ENST00000543957 TRAPPC3LQ5T215 181 aa17.17■□□□□ 0.34
ITM2C-209ENST00000543957 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
ITM2C-209ENST00000543957 SLC34A2O95436 690 aa17.16■□□□□ 0.34
ITM2C-209ENST00000543957 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
ITM2C-209ENST00000543957 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
ITM2C-209ENST00000543957 CARD11Q9BXL7 1154 aa17.16■□□□□ 0.34
ITM2C-209ENST00000543957 PIM2Q9P1W9 311 aa17.16■□□□□ 0.34
ITM2C-209ENST00000543957 RTCBQ9Y3I0 505 aaKnown RBP17.16■□□□□ 0.34
ITM2C-209ENST00000543957 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
ITM2C-209ENST00000543957 SIN3AQ96ST3 1273 aa17.15■□□□□ 0.34
ITM2C-209ENST00000543957 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
ITM2C-209ENST00000543957 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
ITM2C-209ENST00000543957 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
ITM2C-209ENST00000543957 INSRP06213 1382 aa17.14■□□□□ 0.33
ITM2C-209ENST00000543957 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
ITM2C-209ENST00000543957 BRCA1P38398 1863 aaKnown RBP17.13■□□□□ 0.33
ITM2C-209ENST00000543957 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
ITM2C-209ENST00000543957 GYS1P13807 737 aa17.12■□□□□ 0.33
ITM2C-209ENST00000543957 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
ITM2C-209ENST00000543957 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
ITM2C-209ENST00000543957 TNRC6CQ9HCJ0 1690 aaKnown RBP17.11■□□□□ 0.33
ITM2C-209ENST00000543957 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 FYB1O15117 783 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 ADRA2BP18089 450 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 RFC4P35249 363 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 GGNBP2Q9H3C7 697 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 ARFGEF1Q9Y6D6 1849 aa17.11■□□□□ 0.33
ITM2C-209ENST00000543957 FLT4P35916 1363 aa17.1■□□□□ 0.33
ITM2C-209ENST00000543957 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
ITM2C-209ENST00000543957 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.32
ITM2C-209ENST00000543957 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.32
ITM2C-209ENST00000543957 KIF24Q5T7B8 1368 aa17.07■□□□□ 0.32
ITM2C-209ENST00000543957 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
ITM2C-209ENST00000543957 KDRP35968 1356 aa17.06■□□□□ 0.32
ITM2C-209ENST00000543957 GLTPD2A6NH11 291 aa17.06■□□□□ 0.32
ITM2C-209ENST00000543957 CHRNA5P30532 468 aa17.06■□□□□ 0.32
ITM2C-209ENST00000543957 SLC4A9Q96Q91 983 aa17.06■□□□□ 0.32
ITM2C-209ENST00000543957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
ITM2C-209ENST00000543957 CNTNAP4Q9C0A0 1308 aa17.05■□□□□ 0.32
ITM2C-209ENST00000543957 IFNL2Q8IZJ0 200 aa17.05■□□□□ 0.32
ITM2C-209ENST00000543957 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
ITM2C-209ENST00000543957 SBF1O95248 1867 aa17.05■□□□□ 0.32
ITM2C-209ENST00000543957 PHKG2P15735 406 aa17.04■□□□□ 0.32
ITM2C-209ENST00000543957 RASSF7Q02833 373 aa17.03■□□□□ 0.32
ITM2C-209ENST00000543957 TESK2Q96S53 571 aa17.03■□□□□ 0.32
ITM2C-209ENST00000543957 NCAPD2Q15021 1401 aa17.03■□□□□ 0.32
ITM2C-209ENST00000543957 LMNB1P20700 586 aa17.02■□□□□ 0.32
ITM2C-209ENST00000543957 DDR1Q08345 913 aa17.02■□□□□ 0.32
ITM2C-209ENST00000543957 FKBP8Q14318 412 aa17.02■□□□□ 0.32
ITM2C-209ENST00000543957 SRP68Q9UHB9 627 aaKnown RBP17.01■□□□□ 0.31
ITM2C-209ENST00000543957 EMILIN1Q9Y6C2 1016 aa17.01■□□□□ 0.31
ITM2C-209ENST00000543957 KDM6AO15550 1401 aaPredicted RBP17.01■□□□□ 0.31
ITM2C-209ENST00000543957 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
ITM2C-209ENST00000543957 FOXN1O15353 648 aa17■□□□□ 0.31
ITM2C-209ENST00000543957 EYA1Q99502 592 aa17■□□□□ 0.31
ITM2C-209ENST00000543957 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
ITM2C-209ENST00000543957 MKRN1Q9UHC7 482 aaKnown RBP17■□□□□ 0.31
ITM2C-209ENST00000543957 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
ITM2C-209ENST00000543957 PPM1GO15355 546 aaPredicted RBP16.99■□□□□ 0.31
ITM2C-209ENST00000543957 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
ITM2C-209ENST00000543957 CREBZFQ9NS37 354 aa16.99■□□□□ 0.31
ITM2C-209ENST00000543957 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
ITM2C-209ENST00000543957 POTECB2RU33 542 aa16.98■□□□□ 0.31
ITM2C-209ENST00000543957 ERVV-2B6SEH9 535 aa16.98■□□□□ 0.31
ITM2C-209ENST00000543957 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
ITM2C-209ENST00000543957 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
ITM2C-209ENST00000543957 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
ITM2C-209ENST00000543957 TM4SF1P30408 202 aa16.96■□□□□ 0.31
ITM2C-209ENST00000543957 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
ITM2C-209ENST00000543957 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.31
ITM2C-209ENST00000543957 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
ITM2C-209ENST00000543957 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
ITM2C-209ENST00000543957 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
ITM2C-209ENST00000543957 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
ITM2C-209ENST00000543957 TRIM26Q12899 539 aaPredicted RBP16.94■□□□□ 0.3
ITM2C-209ENST00000543957 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
ITM2C-209ENST00000543957 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
ITM2C-209ENST00000543957 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
ITM2C-209ENST00000543957 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
ITM2C-209ENST00000543957 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
ITM2C-209ENST00000543957 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
ITM2C-209ENST00000543957 CNTNAP1P78357 1384 aa16.92■□□□□ 0.3
ITM2C-209ENST00000543957 NFKBIEO00221 500 aa16.92■□□□□ 0.3
ITM2C-209ENST00000543957 CABP4P57796 275 aa16.92■□□□□ 0.3
ITM2C-209ENST00000543957 ZPR1O75312 459 aa16.91■□□□□ 0.3
ITM2C-209ENST00000543957 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
ITM2C-209ENST00000543957 LBX1P52954 281 aa16.9■□□□□ 0.3
ITM2C-209ENST00000543957 USPL1Q5W0Q7 1092 aa16.9■□□□□ 0.3
ITM2C-209ENST00000543957 ABHD8Q96I13 439 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms