RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PDCP20941 246 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 CTNNA3Q9UI47 895 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 UGGT2Q9NYU1 1516 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 UHRF1BP1Q6BDS2 1440 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 A0A087WZG4 1122 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 CDK5RAP3Q96JB5 506 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 UBAC1Q9BSL1 405 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 CHMP5Q9NZZ3 219 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 C6orf229H3BNL8 230 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 PIAS4Q8N2W9 510 aaPredicted RBP8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 RPRD2Q5VT52 1461 aaKnown RBP8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 KIAA0556O60303 1618 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 CCDC69A6NI79 296 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 KCNA6P17658 529 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 SOGA3Q5TF21 947 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 DNAAF4Q8WXU2 420 aa8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 SMARCC1Q92922 1105 aaPredicted RBP8.2□□□□□ -1.1
SRGAP1-206ENST00000543397 TXLNAP40222 546 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 BRPF1P55201 1214 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 ZNF287Q9HBT7 754 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 ITSN2Q9NZM3 1697 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 WDR97A6NE52 1622 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 ANKRD18BA2A2Z9 1011 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 MCM2P49736 904 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 CRACR2BQ8N4Y2 399 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 CABLES1Q8TDN4 633 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 NUP133Q8WUM0 1156 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 SLC24A3Q9HC58 644 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 DDX46Q7L014 1031 aaKnown RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 PPP1R42Q7Z4L9 355 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 DZIP1Q86YF9 867 aaKnown RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 ACSBG1Q96GR2 724 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 CDC5LQ99459 802 aaKnown RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 TBX22Q9Y458 520 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 CYP46A1Q9Y6A2 500 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 ANKRD36BQ8N2N9 1353 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 MAP4K4O95819 1239 aaPredicted RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 SNRPA1P09661 255 aaKnown RBP8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 KIF1BPQ96EK5 621 aa8.19□□□□□ -1.1
SRGAP1-206ENST00000543397 ZNF622Q969S3 477 aaKnown RBP eCLIP8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 SDF4Q9BRK5 362 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 EXOC6BQ9Y2D4 811 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 USP5P45974 858 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 HSP90AB2PQ58FF8 381 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 SASS6Q6UVJ0 657 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 WDR62O43379 1518 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 SLC5A1P13866 664 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 PPIP5K1Q6PFW1 1433 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 KIF21AQ7Z4S6 1674 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 SLFN5Q08AF3 891 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 ANKRD1Q15327 319 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 NBPF6Q5VWK0 638 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 NBPF5PQ86XG9 351 aaPredicted RBP8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 NBPF4Q96M43 638 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 NUP160Q12769 1436 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 KRT18P05783 430 aaKnown RBP8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 EPS15P42566 896 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 ST5P78524 1137 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 TMEM57Q8N5G2 664 aa8.18□□□□□ -1.1
SRGAP1-206ENST00000543397 SH3BP5O60239 455 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 POLR3DP05423 398 aaPredicted RBP8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 IL2RBP14784 551 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 ALDH1L2Q3SY69 923 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 CLGNO14967 610 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 SLF2Q8IX21 1173 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 MPHOSPH10O00566 681 aaKnown RBP8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 ATP6V1AP38606 617 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 RABEP1Q15276 862 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 CHD1LQ86WJ1 897 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 MAP3K12Q12852 859 aa8.17□□□□□ -1.1
SRGAP1-206ENST00000543397 F6X3S4 739 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 FLIIQ13045 1269 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 BLOC1S2Q6QNY1 142 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 SSH1Q8WYL5 1049 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 OFD1O75665 1012 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 GLRX3O76003 335 aaKnown RBP8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 CT47A1Q5JQC4 288 aaPredicted RBP8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 CWC27Q6UX04 472 aaKnown RBP8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 LDHAL6AQ6ZMR3 332 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 ATP10AO60312 1499 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 RAB11FIP3O75154 756 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 NEFHP12036 1026 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 KRT32Q14532 448 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 IMMTQ16891 758 aaKnown RBP8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 JMYQ8N9B5 988 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 MKNK2Q9HBH9 465 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 OLFM4Q6UX06 510 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 NUTM1Q86Y26 1132 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 WWC3Q9ULE0 1092 aa8.16□□□□□ -1.1
SRGAP1-206ENST00000543397 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 CDKL5O76039 1030 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 GCP02774 474 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 STK38Q15208 465 aa8.15□□□□□ -1.1
SRGAP1-206ENST00000543397 ANKRD13AQ8IZ07 590 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms