RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 USP26Q9BXU7 913 aa22.99■■□□□ 1.27
COPS7A-215ENST00000543155 TUBGCP6Q96RT7 1819 aa22.99■■□□□ 1.27
COPS7A-215ENST00000543155 KDM3BQ7LBC6 1761 aa22.98■■□□□ 1.27
COPS7A-215ENST00000543155 RAB3GAP1Q15042 981 aa22.98■■□□□ 1.27
COPS7A-215ENST00000543155 USHBP1Q8N6Y0 703 aa22.98■■□□□ 1.27
COPS7A-215ENST00000543155 LMO7Q8WWI1 1683 aa22.98■■□□□ 1.27
COPS7A-215ENST00000543155 TRAK2O60296 914 aa22.97■■□□□ 1.27
COPS7A-215ENST00000543155 CEMIPQ8WUJ3 1361 aa22.97■■□□□ 1.27
COPS7A-215ENST00000543155 NECTIN2Q92692 538 aa22.97■■□□□ 1.27
COPS7A-215ENST00000543155 TNPO1Q92973 898 aaKnown RBP22.96■■□□□ 1.27
COPS7A-215ENST00000543155 PDE1AP54750 535 aa22.96■■□□□ 1.27
COPS7A-215ENST00000543155 GBP4Q96PP9 640 aa22.96■■□□□ 1.27
COPS7A-215ENST00000543155 RGPD2P0DJD1 1756 aa22.95■■□□□ 1.27
COPS7A-215ENST00000543155 KCNH5Q8NCM2 988 aa22.95■■□□□ 1.26
COPS7A-215ENST00000543155 REC8O95072 547 aa22.94■■□□□ 1.26
COPS7A-215ENST00000543155 ATP8B2P98198 1209 aa22.94■■□□□ 1.26
COPS7A-215ENST00000543155 LRRCC1Q9C099 1032 aa22.94■■□□□ 1.26
COPS7A-215ENST00000543155 PSME1Q06323 249 aa22.93■■□□□ 1.26
COPS7A-215ENST00000543155 HDGFL1Q5TGJ6 251 aa22.93■■□□□ 1.26
COPS7A-215ENST00000543155 EXOC6BQ9Y2D4 811 aa22.93■■□□□ 1.26
COPS7A-215ENST00000543155 SALL3Q9BXA9 1300 aa22.93■■□□□ 1.26
COPS7A-215ENST00000543155 IBTKQ9P2D0 1353 aaPredicted RBP22.92■■□□□ 1.26
COPS7A-215ENST00000543155 PTMSP20962 102 aa22.92■■□□□ 1.26
COPS7A-215ENST00000543155 ESCO1Q5FWF5 840 aa22.92■■□□□ 1.26
COPS7A-215ENST00000543155 NBPF6Q5VWK0 638 aa22.92■■□□□ 1.26
COPS7A-215ENST00000543155 NBPF4Q96M43 638 aa22.92■■□□□ 1.26
COPS7A-215ENST00000543155 ERC2O15083 957 aa22.91■■□□□ 1.26
COPS7A-215ENST00000543155 TRHP20396 242 aaPredicted RBP22.91■■□□□ 1.26
COPS7A-215ENST00000543155 FOXD4L1Q9NU39 408 aa22.91■■□□□ 1.26
COPS7A-215ENST00000543155 PNMA6EA0A0J9YXQ4 647 aa22.91■■□□□ 1.26
COPS7A-215ENST00000543155 GOLGA6L3A6NEY3 463 aa22.91■■□□□ 1.26
COPS7A-215ENST00000543155 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
COPS7A-215ENST00000543155 FSD2A1L4K1 749 aa22.9■■□□□ 1.26
COPS7A-215ENST00000543155 HOXB7P09629 217 aa22.9■■□□□ 1.26
COPS7A-215ENST00000543155 RTN4Q9NQC3 1192 aaKnown RBP22.9■■□□□ 1.26
COPS7A-215ENST00000543155 LRRFIP2Q9Y608 721 aaKnown RBP22.9■■□□□ 1.26
COPS7A-215ENST00000543155 SLIT3O75094 1523 aa22.9■■□□□ 1.26
COPS7A-215ENST00000543155 RBM33Q96EV2 1170 aaKnown RBP22.9■■□□□ 1.26
COPS7A-215ENST00000543155 SETD1BQ9UPS6 1966 aaKnown RBP22.89■■□□□ 1.26
COPS7A-215ENST00000543155 CHMP4AQ9BY43 222 aa22.89■■□□□ 1.25
COPS7A-215ENST00000543155 GZF1Q9H116 711 aaPredicted RBP22.89■■□□□ 1.25
COPS7A-215ENST00000543155 UBTFL1P0CB47 393 aaPredicted RBP22.88■■□□□ 1.25
COPS7A-215ENST00000543155 MX1P20591 662 aa22.88■■□□□ 1.25
COPS7A-215ENST00000543155 USP44Q9H0E7 712 aa22.88■■□□□ 1.25
COPS7A-215ENST00000543155 EIF4A1P60842 406 aaKnown RBP22.88■■□□□ 1.25
COPS7A-215ENST00000543155 NPHP4O75161 1426 aaPredicted RBP22.87■■□□□ 1.25
COPS7A-215ENST00000543155 NCAPD2Q15021 1401 aa22.87■■□□□ 1.25
COPS7A-215ENST00000543155 ST18O60284 1047 aa22.87■■□□□ 1.25
COPS7A-215ENST00000543155 PHAXQ9H814 394 aaKnown RBP22.87■■□□□ 1.25
COPS7A-215ENST00000543155 CAMTA1Q9Y6Y1 1673 aa22.86■■□□□ 1.25
COPS7A-215ENST00000543155 ZBTB7CA1YPR0 619 aa22.86■■□□□ 1.25
COPS7A-215ENST00000543155 SKOR2Q2VWA4 1001 aaPredicted RBP22.86■■□□□ 1.25
COPS7A-215ENST00000543155 AKAP4Q5JQC9 854 aa22.86■■□□□ 1.25
COPS7A-215ENST00000543155 SRCIN1Q9C0H9 1055 aa22.86■■□□□ 1.25
COPS7A-215ENST00000543155 LGR6Q9HBX8 967 aa22.85■■□□□ 1.25
COPS7A-215ENST00000543155 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
COPS7A-215ENST00000543155 PLEKHO1Q53GL0 409 aaPredicted RBP22.85■■□□□ 1.25
COPS7A-215ENST00000543155 STAP2Q9UGK3 403 aa22.85■■□□□ 1.25
COPS7A-215ENST00000543155 TRPM3Q9HCF6 1732 aaPredicted RBP22.84■■□□□ 1.25
COPS7A-215ENST00000543155 ZNF530Q6P9A1 599 aaPredicted RBP22.84■■□□□ 1.25
COPS7A-215ENST00000543155 CLEC17AQ6ZS10 378 aa22.84■■□□□ 1.25
COPS7A-215ENST00000543155 AOX1Q06278 1338 aa22.84■■□□□ 1.25
COPS7A-215ENST00000543155 SSH3Q8TE77 659 aa22.84■■□□□ 1.25
COPS7A-215ENST00000543155 SSFA2P28290 1259 aa22.83■■□□□ 1.25
COPS7A-215ENST00000543155 TEFQ10587 303 aa22.83■■□□□ 1.25
COPS7A-215ENST00000543155 AMOTQ4VCS5 1084 aa22.83■■□□□ 1.25
COPS7A-215ENST00000543155 EIF2S2P20042 333 aaKnown RBP22.82■■□□□ 1.24
COPS7A-215ENST00000543155 TSHZ3Q63HK5 1081 aa22.82■■□□□ 1.24
COPS7A-215ENST00000543155 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
COPS7A-215ENST00000543155 ESYT1Q9BSJ8 1104 aa22.82■■□□□ 1.24
COPS7A-215ENST00000543155 ISY1Q9ULR0 285 aaKnown RBP22.82■■□□□ 1.24
COPS7A-215ENST00000543155 KIF1AQ12756 1690 aa22.82■■□□□ 1.24
COPS7A-215ENST00000543155 RAB11FIP3O75154 756 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 ARHGEF25Q86VW2 580 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 PXDNQ92626 1479 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 BTBD11A6QL63 1104 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 GCP02774 474 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 XRCC6P12956 609 aaKnown RBP eCLIP22.81■■□□□ 1.24
COPS7A-215ENST00000543155 NUCB2P80303 420 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 POLA2Q14181 598 aa22.81■■□□□ 1.24
COPS7A-215ENST00000543155 GOLGA6L22H0YM25 854 aa22.8■■□□□ 1.24
COPS7A-215ENST00000543155 CWC22Q9HCG8 908 aaKnown RBP22.8■■□□□ 1.24
COPS7A-215ENST00000543155 DNAAF4Q8WXU2 420 aa22.79■■□□□ 1.24
COPS7A-215ENST00000543155 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
COPS7A-215ENST00000543155 ORAI2Q96SN7 254 aa22.79■■□□□ 1.24
COPS7A-215ENST00000543155 AK9Q5TCS8 1911 aa22.79■■□□□ 1.24
COPS7A-215ENST00000543155 TRIM6-TRIM34B2RNG4 842 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 KCNQ3O43525 872 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 MCCP23508 829 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 CHMLP26374 656 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 MRE11P49959 708 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 C1orf141Q5JVX7 400 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 BEND3Q5T5X7 828 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 PPP1R42Q7Z4L9 355 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 FAM43AQ8N2R8 423 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 LMTK3Q96Q04 1460 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 RNMTO43148 476 aaKnown RBP22.78■■□□□ 1.24
COPS7A-215ENST00000543155 MPRIPQ6WCQ1 1025 aa22.78■■□□□ 1.24
COPS7A-215ENST00000543155 ARXQ96QS3 562 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms