RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 KCNQ4P56696 695 aa13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 CHRDL2Q6WN34 429 aa13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
TNFRSF1A-214ENST00000543048 KDRP35968 1356 aa13.12□□□□□ -0.31
TNFRSF1A-214ENST00000543048 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-214ENST00000543048 ZNF827Q17R98 1081 aa13.12□□□□□ -0.31
TNFRSF1A-214ENST00000543048 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
TNFRSF1A-214ENST00000543048 QSER1Q2KHR3 1735 aa13.12□□□□□ -0.31
TNFRSF1A-214ENST00000543048 ZBTB7AO95365 584 aa13.11□□□□□ -0.31
TNFRSF1A-214ENST00000543048 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
TNFRSF1A-214ENST00000543048 TFCP2L1Q9NZI6 479 aa13.11□□□□□ -0.31
TNFRSF1A-214ENST00000543048 PALLDQ8WX93 1383 aa13.1□□□□□ -0.31
TNFRSF1A-214ENST00000543048 HMOX1P09601 288 aa13.1□□□□□ -0.31
TNFRSF1A-214ENST00000543048 CFAP53Q96M91 514 aa13.1□□□□□ -0.31
TNFRSF1A-214ENST00000543048 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-214ENST00000543048 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
TNFRSF1A-214ENST00000543048 FKBP8Q14318 412 aa13.09□□□□□ -0.31
TNFRSF1A-214ENST00000543048 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-214ENST00000543048 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
TNFRSF1A-214ENST00000543048 MTFR1LQ9H019 292 aa13.09□□□□□ -0.31
TNFRSF1A-214ENST00000543048 ASAP1Q9ULH1 1129 aa13.09□□□□□ -0.31
TNFRSF1A-214ENST00000543048 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
TNFRSF1A-214ENST00000543048 C5P01031 1676 aa13.08□□□□□ -0.31
TNFRSF1A-214ENST00000543048 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-214ENST00000543048 PPP2R1AP30153 589 aa13.08□□□□□ -0.32
TNFRSF1A-214ENST00000543048 CABP4P57796 275 aa13.08□□□□□ -0.32
TNFRSF1A-214ENST00000543048 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
TNFRSF1A-214ENST00000543048 ATG3Q9NT62 314 aa13.08□□□□□ -0.32
TNFRSF1A-214ENST00000543048 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
TNFRSF1A-214ENST00000543048 LOC102724428A0A0B4J2F2 783 aa13.07□□□□□ -0.32
TNFRSF1A-214ENST00000543048 SIK1P57059 783 aa13.07□□□□□ -0.32
TNFRSF1A-214ENST00000543048 NUDCQ9Y266 331 aa13.07□□□□□ -0.32
TNFRSF1A-214ENST00000543048 PTGER2P43116 358 aa13.06□□□□□ -0.32
TNFRSF1A-214ENST00000543048 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
TNFRSF1A-214ENST00000543048 PNPLA7Q6ZV29 1317 aa13.06□□□□□ -0.32
TNFRSF1A-214ENST00000543048 COL3A1P02461 1466 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-214ENST00000543048 ATP6V1AP38606 617 aa13.05□□□□□ -0.32
TNFRSF1A-214ENST00000543048 MTHFSDQ2M296 383 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-214ENST00000543048 FLAD1Q8NFF5 587 aa13.05□□□□□ -0.32
TNFRSF1A-214ENST00000543048 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-214ENST00000543048 DDX10Q13206 875 aaKnown RBP13.04□□□□□ -0.32
TNFRSF1A-214ENST00000543048 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF1A-214ENST00000543048 SGIP1Q9BQI5 828 aa13.04□□□□□ -0.32
TNFRSF1A-214ENST00000543048 LGR6Q9HBX8 967 aa13.04□□□□□ -0.32
TNFRSF1A-214ENST00000543048 C4BP0C0L5 1744 aa13.04□□□□□ -0.32
TNFRSF1A-214ENST00000543048 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
TNFRSF1A-214ENST00000543048 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
TNFRSF1A-214ENST00000543048 RNMTO43148 476 aaKnown RBP13.03□□□□□ -0.32
TNFRSF1A-214ENST00000543048 AK7Q96M32 723 aa13.03□□□□□ -0.32
TNFRSF1A-214ENST00000543048 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.32
TNFRSF1A-214ENST00000543048 U2AF1L5P0DN76 240 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-214ENST00000543048 POLD1P28340 1107 aa13.02□□□□□ -0.33
TNFRSF1A-214ENST00000543048 U2AF1Q01081 240 aaKnown RBP eCLIP13.02□□□□□ -0.33
TNFRSF1A-214ENST00000543048 ITPK1Q13572 414 aa13.02□□□□□ -0.33
TNFRSF1A-214ENST00000543048 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
TNFRSF1A-214ENST00000543048 ARXQ96QS3 562 aa13.02□□□□□ -0.33
TNFRSF1A-214ENST00000543048 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
TNFRSF1A-214ENST00000543048 SLC52A2Q9HAB3 445 aa13.01□□□□□ -0.33
TNFRSF1A-214ENST00000543048 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 FCHSD2O94868 740 aa13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 RALBP1Q15311 655 aa13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 RSPH6AQ9H0K4 717 aa13□□□□□ -0.33
TNFRSF1A-214ENST00000543048 PTCD1O75127 700 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-214ENST00000543048 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
TNFRSF1A-214ENST00000543048 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
TNFRSF1A-214ENST00000543048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 GNPATO15228 680 aa12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 SSFA2P28290 1259 aa12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 IL17REQ8NFR9 667 aa12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 FHDC1Q9C0D6 1143 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 COL5A3P25940 1745 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 ADAMTS7Q9UKP4 1686 aa12.98□□□□□ -0.33
TNFRSF1A-214ENST00000543048 PHF14O94880 888 aa12.97□□□□□ -0.33
TNFRSF1A-214ENST00000543048 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
TNFRSF1A-214ENST00000543048 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
TNFRSF1A-214ENST00000543048 AMIGO3Q86WK7 504 aa12.97□□□□□ -0.33
TNFRSF1A-214ENST00000543048 MAP3K5Q99683 1374 aa12.96□□□□□ -0.33
TNFRSF1A-214ENST00000543048 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
TNFRSF1A-214ENST00000543048 RTCBQ9Y3I0 505 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-214ENST00000543048 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 RPS6KA4O75676 772 aa12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 NEFMP07197 916 aa12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 TEFQ10587 303 aa12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 PNNQ9H307 717 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-214ENST00000543048 MRC1P22897 1456 aa12.94□□□□□ -0.34
TNFRSF1A-214ENST00000543048 POTEHQ6S545 545 aa12.94□□□□□ -0.34
TNFRSF1A-214ENST00000543048 HTATSF1O43719 755 aaKnown RBP12.93□□□□□ -0.34
TNFRSF1A-214ENST00000543048 CRKLP46109 303 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms