RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
CHFR-221ENST00000542714 ZNF428Q96B54 188 aa17.09■□□□□ 0.33
CHFR-221ENST00000542714 NGLY1Q96IV0 654 aa17.09■□□□□ 0.33
CHFR-221ENST00000542714 SLC52A2Q9HAB3 445 aa17.09■□□□□ 0.33
CHFR-221ENST00000542714 SMC4Q9NTJ3 1288 aa17.09■□□□□ 0.33
CHFR-221ENST00000542714 UBR2Q8IWV8 1755 aa17.08■□□□□ 0.33
CHFR-221ENST00000542714 C5P01031 1676 aa17.08■□□□□ 0.32
CHFR-221ENST00000542714 GLI3P10071 1580 aa17.08■□□□□ 0.32
CHFR-221ENST00000542714 KCNQ3O43525 872 aa17.08■□□□□ 0.32
CHFR-221ENST00000542714 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.32
CHFR-221ENST00000542714 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
CHFR-221ENST00000542714 CACNA1FO60840 1977 aa17.08■□□□□ 0.32
CHFR-221ENST00000542714 BRPF1P55201 1214 aaPredicted RBP17.07■□□□□ 0.32
CHFR-221ENST00000542714 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
CHFR-221ENST00000542714 VPS72Q15906 364 aa17.07■□□□□ 0.32
CHFR-221ENST00000542714 MRPL50Q8N5N7 158 aaKnown RBP17.07■□□□□ 0.32
CHFR-221ENST00000542714 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
CHFR-221ENST00000542714 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
CHFR-221ENST00000542714 THSD7AQ9UPZ6 1657 aa17.07■□□□□ 0.32
CHFR-221ENST00000542714 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
CHFR-221ENST00000542714 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
CHFR-221ENST00000542714 EXOC6Q8TAG9 804 aa17.06■□□□□ 0.32
CHFR-221ENST00000542714 DDX54Q8TDD1 881 aaKnown RBP17.06■□□□□ 0.32
CHFR-221ENST00000542714 CRBNQ96SW2 442 aa17.06■□□□□ 0.32
CHFR-221ENST00000542714 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
CHFR-221ENST00000542714 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
CHFR-221ENST00000542714 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
CHFR-221ENST00000542714 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
CHFR-221ENST00000542714 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
CHFR-221ENST00000542714 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
CHFR-221ENST00000542714 LAMB4A4D0S4 1761 aa17.03■□□□□ 0.32
CHFR-221ENST00000542714 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
CHFR-221ENST00000542714 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
CHFR-221ENST00000542714 USP21Q9UK80 565 aa17.03■□□□□ 0.32
CHFR-221ENST00000542714 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
CHFR-221ENST00000542714 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
CHFR-221ENST00000542714 ATRNO75882 1429 aa17.03■□□□□ 0.32
CHFR-221ENST00000542714 AFF2P51816 1311 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 KIF16BQ96L93 1317 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 RLBP1P12271 317 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
CHFR-221ENST00000542714 CABP4P57796 275 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 PANK1Q8TE04 598 aa17.02■□□□□ 0.32
CHFR-221ENST00000542714 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
CHFR-221ENST00000542714 EXOC5O00471 708 aa17.01■□□□□ 0.31
CHFR-221ENST00000542714 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
CHFR-221ENST00000542714 PPP4R2Q9NY27 417 aa17.01■□□□□ 0.31
CHFR-221ENST00000542714 TRIM27P14373 513 aa17■□□□□ 0.31
CHFR-221ENST00000542714 ZNF790Q6PG37 636 aa17■□□□□ 0.31
CHFR-221ENST00000542714 RGS12O14924 1447 aa16.99■□□□□ 0.31
CHFR-221ENST00000542714 HOXB7P09629 217 aa16.99■□□□□ 0.31
CHFR-221ENST00000542714 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
CHFR-221ENST00000542714 N4BP2Q86UW6 1770 aaPredicted RBP16.99■□□□□ 0.31
CHFR-221ENST00000542714 DDB1Q16531 1140 aa16.98■□□□□ 0.31
CHFR-221ENST00000542714 FAM98CQ17RN3 349 aaKnown RBP16.98■□□□□ 0.31
CHFR-221ENST00000542714 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
CHFR-221ENST00000542714 DZIP1LQ8IYY4 767 aaKnown RBP16.97■□□□□ 0.31
CHFR-221ENST00000542714 MARCH10Q8NA82 808 aaPredicted RBP16.97■□□□□ 0.31
CHFR-221ENST00000542714 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
CHFR-221ENST00000542714 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
CHFR-221ENST00000542714 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
CHFR-221ENST00000542714 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
CHFR-221ENST00000542714 CCDC30Q5VVM6 783 aa16.96■□□□□ 0.31
CHFR-221ENST00000542714 G2E3Q7L622 706 aa16.96■□□□□ 0.31
CHFR-221ENST00000542714 NECTIN2Q92692 538 aa16.96■□□□□ 0.31
CHFR-221ENST00000542714 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
CHFR-221ENST00000542714 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
CHFR-221ENST00000542714 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
CHFR-221ENST00000542714 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
CHFR-221ENST00000542714 BCL9O00512 1426 aa16.95■□□□□ 0.3
CHFR-221ENST00000542714 ABCC4O15439 1325 aa16.95■□□□□ 0.3
CHFR-221ENST00000542714 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
CHFR-221ENST00000542714 MS4A1P11836 297 aa16.94■□□□□ 0.3
CHFR-221ENST00000542714 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
CHFR-221ENST00000542714 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
CHFR-221ENST00000542714 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
CHFR-221ENST00000542714 FTSJ3Q8IY81 847 aaKnown RBP16.93■□□□□ 0.3
CHFR-221ENST00000542714 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
CHFR-221ENST00000542714 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
CHFR-221ENST00000542714 PIGBQ92521 554 aa16.93■□□□□ 0.3
CHFR-221ENST00000542714 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
CHFR-221ENST00000542714 TRPC5Q9UL62 973 aaPredicted RBP16.93■□□□□ 0.3
CHFR-221ENST00000542714 BRWD3Q6RI45 1802 aa16.93■□□□□ 0.3
CHFR-221ENST00000542714 EIF2S2P20042 333 aaKnown RBP16.92■□□□□ 0.3
CHFR-221ENST00000542714 MVPQ14764 893 aaKnown RBP16.92■□□□□ 0.3
CHFR-221ENST00000542714 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
CHFR-221ENST00000542714 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
CHFR-221ENST00000542714 TJP1Q07157 1748 aa16.92■□□□□ 0.3
CHFR-221ENST00000542714 PTPRCP08575 1304 aa16.92■□□□□ 0.3
CHFR-221ENST00000542714 SBF2Q86WG5 1849 aa16.91■□□□□ 0.3
CHFR-221ENST00000542714 CHPF2Q9P2E5 772 aa16.91■□□□□ 0.3
CHFR-221ENST00000542714 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
CHFR-221ENST00000542714 ONECUT3O60422 494 aaPredicted RBP16.9■□□□□ 0.3
CHFR-221ENST00000542714 SNRPA1P09661 255 aaKnown RBP16.9■□□□□ 0.3
CHFR-221ENST00000542714 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
CHFR-221ENST00000542714 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
CHFR-221ENST00000542714 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
CHFR-221ENST00000542714 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms