RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 HABP4Q5JVS0 413 aaKnown RBP3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 TRIM67Q6ZTA4 783 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 SCUBE3Q8IX30 993 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 PDGFDQ9GZP0 370 aaPredicted RBP3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 ASXL1Q8IXJ9 1541 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 ADGRB2O60241 1585 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 MAST1Q9Y2H9 1570 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 ADCY9O60503 1353 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 KIDINS220Q9ULH0 1771 aa3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 C11orf95C9JLR9 678 aaPredicted RBP3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 TULP1O00294 542 aaPredicted RBP3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 WFS1O76024 890 aa3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 AVPP01185 164 aa3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 YBX3P16989 372 aaKnown RBP eCLIP3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 ATP6V1AP38606 617 aa3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 SMCPP49901 116 aaPredicted RBP3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 LIAT1Q6ZQX7 453 aa3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 SLC16A10Q8TF71 515 aa3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 DHX57Q6P158 1386 aaKnown RBP3.87□□□□□ -1.79
TRAV1-1-201ENST00000542354 SLIT1O75093 1534 aa3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 ARHGAP5Q13017 1502 aa3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 LBX1P52954 281 aa3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 PXYLP1Q8TE99 480 aa3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 AAASQ9NRG9 546 aa3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 DAXXQ9UER7 740 aaPredicted RBP3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 SOS2Q07890 1332 aaPredicted RBP3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 NUP153P49790 1475 aaKnown RBP3.86□□□□□ -1.79
TRAV1-1-201ENST00000542354 SAMD9LQ8IVG5 1584 aa3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 PPEF1O14829 653 aaPredicted RBP3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 MSS51Q4VC12 460 aa3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 METTL3Q86U44 580 aaKnown RBP3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 SNIP1Q8TAD8 396 aaKnown RBP3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 FCF1Q9Y324 198 aaKnown RBP3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 TMEM2Q9UHN6 1383 aa3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 ABCC5O15440 1437 aa3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 SLIT2O94813 1529 aa3.85□□□□□ -1.79
TRAV1-1-201ENST00000542354 NUP188Q5SRE5 1749 aa3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 WNT7AO00755 349 aa3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 KIF3BO15066 747 aa3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 MLLT3P42568 568 aaPredicted RBP3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 SNX27Q96L92 541 aa3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 STK32BQ9NY57 414 aa3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 CDK11AQ9UQ88 783 aaPredicted RBP3.84□□□□□ -1.79
TRAV1-1-201ENST00000542354 RREB1Q92766 1687 aa3.84□□□□□ -1.8
TRAV1-1-201ENST00000542354 TNS1Q9HBL0 1735 aaKnown RBP3.84□□□□□ -1.8
TRAV1-1-201ENST00000542354 MYO5CQ9NQX4 1742 aa3.84□□□□□ -1.8
TRAV1-1-201ENST00000542354 DDX11L8A8MPP1 907 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 GNPATO15228 680 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 ST8SIA5O15466 376 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 WIPF1O43516 503 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 SLC10A3P09131 477 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 POLD1P28340 1107 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 MORN1Q5T089 497 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 SMC1BQ8NDV3 1235 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 KCNV2Q8TDN2 545 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 NMRK2Q9NPI5 230 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 TOR4AQ9NXH8 423 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 PKD2L1Q9P0L9 805 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 DCCP43146 1447 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 MYOM2P54296 1465 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 EFCAB6Q5THR3 1501 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 TET3O43151 1660 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 CASZ1Q86V15 1759 aa3.83□□□□□ -1.8
TRAV1-1-201ENST00000542354 PLXNC1O60486 1568 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 SAMD9Q5K651 1589 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 RPRD2Q5VT52 1461 aaKnown RBP3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 PLSCR1O15162 318 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 GCGRP47871 477 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 FXR1P51114 621 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 USP46P62068 366 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 SLC15A2Q16348 729 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 PUS10Q3MIT2 529 aaKnown RBP3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 NPAS3Q8IXF0 933 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 NBPF15Q8N660 670 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 NLGN2Q8NFZ4 835 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 TBX22Q9Y458 520 aa3.82□□□□□ -1.8
TRAV1-1-201ENST00000542354 UBR1Q8IWV7 1749 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 MST1RQ04912 1400 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 HAP1P54257 671 aaPredicted RBP3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 WNT7BP56706 349 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 FUT2Q10981 343 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 TRIM32Q13049 653 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 PDE3BQ13370 1112 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 EMID1Q96A84 441 aaPredicted RBP3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 IGSF5Q9NSI5 407 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 PKD1L2Q7Z442 2459 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 TMEM131LA2VDJ0 1609 aa3.81□□□□□ -1.8
TRAV1-1-201ENST00000542354 GPATCH8Q9UKJ3 1502 aaKnown RBP3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 HSPA8P11142 646 aaKnown RBP3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 BRICD5Q6PL45 260 aa3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 PMFBP1Q8TBY8 1022 aa3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 TRIM47Q96LD4 638 aa3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 ATP13A2Q9NQ11 1180 aa3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 GMPR2Q9P2T1 348 aaKnown RBP3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 MKRN1Q9UHC7 482 aaKnown RBP3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 SLC27A5Q9Y2P5 690 aa3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 MARF1Q9Y4F3 1742 aaKnown RBP3.8□□□□□ -1.8
TRAV1-1-201ENST00000542354 COL22A1Q8NFW1 1626 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 551 ms