RNA–Protein interactions for RNA: ENST00000542142.1

MMP17-208, Transcript of matrix metallopeptidase 17, humanhuman

TSL 4

Gene MMP17, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-208ENST00000542142 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
MMP17-208ENST00000542142 PDGFDQ9GZP0 370 aaPredicted RBP20.8■□□□□ 0.92
MMP17-208ENST00000542142 PNNQ9H307 717 aaKnown RBP20.8■□□□□ 0.92
MMP17-208ENST00000542142 TFCP2L1Q9NZI6 479 aa20.8■□□□□ 0.92
MMP17-208ENST00000542142 ADAMTS7Q9UKP4 1686 aa20.8■□□□□ 0.92
MMP17-208ENST00000542142 NEFMP07197 916 aa20.79■□□□□ 0.92
MMP17-208ENST00000542142 ATP6V1AP38606 617 aa20.78■□□□□ 0.92
MMP17-208ENST00000542142 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
MMP17-208ENST00000542142 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
MMP17-208ENST00000542142 LRP5O75197 1615 aa20.78■□□□□ 0.92
MMP17-208ENST00000542142 RBM42Q9BTD8 480 aaKnown RBP20.77■□□□□ 0.92
MMP17-208ENST00000542142 CASZ1Q86V15 1759 aa20.77■□□□□ 0.91
MMP17-208ENST00000542142 C5P01031 1676 aa20.77■□□□□ 0.91
MMP17-208ENST00000542142 ITPK1Q13572 414 aa20.76■□□□□ 0.91
MMP17-208ENST00000542142 SPON1Q9HCB6 807 aa20.76■□□□□ 0.91
MMP17-208ENST00000542142 PNPLA7Q6ZV29 1317 aa20.76■□□□□ 0.91
MMP17-208ENST00000542142 CEMIPQ8WUJ3 1361 aa20.75■□□□□ 0.91
MMP17-208ENST00000542142 PTCD1O75127 700 aaKnown RBP20.75■□□□□ 0.91
MMP17-208ENST00000542142 TEFQ10587 303 aa20.75■□□□□ 0.91
MMP17-208ENST00000542142 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
MMP17-208ENST00000542142 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
MMP17-208ENST00000542142 HTATSF1O43719 755 aaKnown RBP20.74■□□□□ 0.91
MMP17-208ENST00000542142 ZBTB7AO95365 584 aa20.74■□□□□ 0.91
MMP17-208ENST00000542142 RTF1Q92541 710 aaKnown RBP20.74■□□□□ 0.91
MMP17-208ENST00000542142 AK7Q96M32 723 aa20.74■□□□□ 0.91
MMP17-208ENST00000542142 MAPK8IP3Q9UPT6 1336 aa20.74■□□□□ 0.91
MMP17-208ENST00000542142 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
MMP17-208ENST00000542142 MTFR1LQ9H019 292 aa20.73■□□□□ 0.91
MMP17-208ENST00000542142 C4BP0C0L5 1744 aa20.73■□□□□ 0.91
MMP17-208ENST00000542142 SLC16A10Q8TF71 515 aa20.72■□□□□ 0.91
MMP17-208ENST00000542142 ZNF831Q5JPB2 1677 aa20.72■□□□□ 0.91
MMP17-208ENST00000542142 TAF1LQ8IZX4 1826 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 QSER1Q2KHR3 1735 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 ANP32CO43423 234 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 SLC39A6Q13433 755 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 NFE2L2Q16236 605 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 MCM10Q7L590 875 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 FLAD1Q8NFF5 587 aa20.71■□□□□ 0.91
MMP17-208ENST00000542142 ATF5Q9Y2D1 282 aaPredicted RBP20.7■□□□□ 0.9
MMP17-208ENST00000542142 COL23A1Q86Y22 540 aaPredicted RBP20.69■□□□□ 0.9
MMP17-208ENST00000542142 DCTN1Q14203 1278 aa20.68■□□□□ 0.9
MMP17-208ENST00000542142 RC3H1Q5TC82 1133 aaKnown RBP20.68■□□□□ 0.9
MMP17-208ENST00000542142 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
MMP17-208ENST00000542142 TTC5Q8N0Z6 440 aa20.68■□□□□ 0.9
MMP17-208ENST00000542142 ADAMTS8Q9UP79 889 aa20.68■□□□□ 0.9
MMP17-208ENST00000542142 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
MMP17-208ENST00000542142 VIRMAQ69YN4 1812 aaKnown RBP20.67■□□□□ 0.9
MMP17-208ENST00000542142 TUBGCP6Q96RT7 1819 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 GNPATO15228 680 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 MSH5O43196 834 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 SSFA2P28290 1259 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 PTGER2P43116 358 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 CNTNAP4Q9C0A0 1308 aa20.67■□□□□ 0.9
MMP17-208ENST00000542142 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
MMP17-208ENST00000542142 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
MMP17-208ENST00000542142 VSIG10Q8N0Z9 540 aa20.66■□□□□ 0.9
MMP17-208ENST00000542142 CICQ96RK0 1608 aaPredicted RBP20.65■□□□□ 0.9
MMP17-208ENST00000542142 PHF14O94880 888 aa20.65■□□□□ 0.9
MMP17-208ENST00000542142 CCDC146Q8IYE0 955 aa20.65■□□□□ 0.9
MMP17-208ENST00000542142 RUNDC1Q96C34 613 aa20.65■□□□□ 0.9
MMP17-208ENST00000542142 SGIP1Q9BQI5 828 aa20.65■□□□□ 0.9
MMP17-208ENST00000542142 PPP1R1BQ9UD71 204 aaPredicted RBP20.65■□□□□ 0.9
MMP17-208ENST00000542142 SIPA1L3O60292 1781 aaPredicted RBP20.64■□□□□ 0.9
MMP17-208ENST00000542142 DNAJC10Q8IXB1 793 aa20.64■□□□□ 0.89
MMP17-208ENST00000542142 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
MMP17-208ENST00000542142 TMPOP42166 694 aaKnown RBP20.63■□□□□ 0.89
MMP17-208ENST00000542142 CRKLP46109 303 aaKnown RBP20.63■□□□□ 0.89
MMP17-208ENST00000542142 RIPK4P57078 832 aa20.63■□□□□ 0.89
MMP17-208ENST00000542142 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
MMP17-208ENST00000542142 CCDC184Q52MB2 194 aa20.63■□□□□ 0.89
MMP17-208ENST00000542142 SMIM5Q71RC9 77 aa20.63■□□□□ 0.89
MMP17-208ENST00000542142 ZNF496Q96IT1 587 aaPredicted RBP20.63■□□□□ 0.89
MMP17-208ENST00000542142 COL5A3P25940 1745 aaPredicted RBP20.63■□□□□ 0.89
MMP17-208ENST00000542142 TJP1Q07157 1748 aa20.62■□□□□ 0.89
MMP17-208ENST00000542142 RPS6KA4O75676 772 aa20.62■□□□□ 0.89
MMP17-208ENST00000542142 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
MMP17-208ENST00000542142 UBR3Q6ZT12 1888 aa20.62■□□□□ 0.89
MMP17-208ENST00000542142 UBR2Q8IWV8 1755 aa20.62■□□□□ 0.89
MMP17-208ENST00000542142 HEG1Q9ULI3 1381 aa20.61■□□□□ 0.89
MMP17-208ENST00000542142 CYP19A1P11511 503 aaPredicted RBP20.61■□□□□ 0.89
MMP17-208ENST00000542142 ADRA2BP18089 450 aa20.61■□□□□ 0.89
MMP17-208ENST00000542142 TRAPPC3LQ5T215 181 aa20.61■□□□□ 0.89
MMP17-208ENST00000542142 KCNQ3O43525 872 aa20.6■□□□□ 0.89
MMP17-208ENST00000542142 POLD1P28340 1107 aa20.6■□□□□ 0.89
MMP17-208ENST00000542142 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
MMP17-208ENST00000542142 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
MMP17-208ENST00000542142 TEX13AQ9BXU3 409 aaPredicted RBP20.6■□□□□ 0.89
MMP17-208ENST00000542142 CCDC87Q9NVE4 849 aa20.6■□□□□ 0.89
MMP17-208ENST00000542142 PNISRQ8TF01 805 aaKnown RBP20.59■□□□□ 0.89
MMP17-208ENST00000542142 THUMPD2Q9BTF0 503 aaKnown RBP20.59■□□□□ 0.89
MMP17-208ENST00000542142 RRP7AQ9Y3A4 280 aaKnown RBP20.59■□□□□ 0.89
MMP17-208ENST00000542142 STARD3NLO95772 234 aa20.58■□□□□ 0.89
MMP17-208ENST00000542142 ARXQ96QS3 562 aa20.58■□□□□ 0.89
MMP17-208ENST00000542142 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
MMP17-208ENST00000542142 DLG5Q8TDM6 1919 aa20.58■□□□□ 0.88
MMP17-208ENST00000542142 NEUROD2Q15784 382 aa20.57■□□□□ 0.88
MMP17-208ENST00000542142 MSL1Q68DK7 614 aa20.57■□□□□ 0.88
MMP17-208ENST00000542142 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
MMP17-208ENST00000542142 RFC4P35249 363 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms