RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 RAD21O60216 631 aa7.94□□□□□ -1.14
LEMD3-204ENST00000542032 GPC1P35052 558 aa7.94□□□□□ -1.14
LEMD3-204ENST00000542032 RNF144AP50876 292 aaPredicted RBP7.94□□□□□ -1.14
LEMD3-204ENST00000542032 SLFNL1Q499Z3 407 aa7.94□□□□□ -1.14
LEMD3-204ENST00000542032 CYP2U1Q7Z449 544 aa7.94□□□□□ -1.14
LEMD3-204ENST00000542032 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
LEMD3-204ENST00000542032 A0A1W2PRU2 124 aa7.93□□□□□ -1.14
LEMD3-204ENST00000542032 FNBP4Q8N3X1 1017 aaPredicted RBP7.93□□□□□ -1.14
LEMD3-204ENST00000542032 POLMQ9NP87 494 aaPredicted RBP7.93□□□□□ -1.14
LEMD3-204ENST00000542032 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
LEMD3-204ENST00000542032 CLN3Q13286 438 aa7.92□□□□□ -1.14
LEMD3-204ENST00000542032 SEMA6BQ9H3T3 888 aa7.92□□□□□ -1.14
LEMD3-204ENST00000542032 DOLKQ9UPQ8 538 aa7.92□□□□□ -1.14
LEMD3-204ENST00000542032 SENP3-EIF4A1A0A087X0R7 540 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 GNRH1P01148 92 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 BCRP11274 1271 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 MAP7D1Q3KQU3 841 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 WWC1Q8IX03 1113 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 ADAMTS19Q8TE59 1207 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 HRH3Q9Y5N1 445 aa7.91□□□□□ -1.14
LEMD3-204ENST00000542032 POM121CA8CG34 1229 aa7.9□□□□□ -1.14
LEMD3-204ENST00000542032 USP4Q13107 963 aa7.9□□□□□ -1.14
LEMD3-204ENST00000542032 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.14
LEMD3-204ENST00000542032 GRIP2Q9C0E4 1043 aa7.9□□□□□ -1.14
LEMD3-204ENST00000542032 PIK3CDO00329 1044 aa7.89□□□□□ -1.15
LEMD3-204ENST00000542032 MYCP01106 439 aaPredicted RBP7.89□□□□□ -1.15
LEMD3-204ENST00000542032 IL2RAP01589 272 aa7.89□□□□□ -1.15
LEMD3-204ENST00000542032 LYSMD3Q7Z3D4 306 aa7.89□□□□□ -1.15
LEMD3-204ENST00000542032 NFATC2IPQ8NCF5 419 aa7.89□□□□□ -1.15
LEMD3-204ENST00000542032 CLUAP1Q96AJ1 413 aa7.89□□□□□ -1.15
LEMD3-204ENST00000542032 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
LEMD3-204ENST00000542032 A6NJR5 290 aa7.88□□□□□ -1.15
LEMD3-204ENST00000542032 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
LEMD3-204ENST00000542032 ESYT1Q9BSJ8 1104 aa7.88□□□□□ -1.15
LEMD3-204ENST00000542032 IGF1RP08069 1367 aa7.87□□□□□ -1.15
LEMD3-204ENST00000542032 MEN1O00255 615 aa7.87□□□□□ -1.15
LEMD3-204ENST00000542032 COL8A1P27658 744 aa7.87□□□□□ -1.15
LEMD3-204ENST00000542032 SNRPNP63162 240 aaKnown RBP7.87□□□□□ -1.15
LEMD3-204ENST00000542032 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
LEMD3-204ENST00000542032 SIRT1Q96EB6 747 aa7.87□□□□□ -1.15
LEMD3-204ENST00000542032 SPATA31C2B4DYI2 1134 aa7.86□□□□□ -1.15
LEMD3-204ENST00000542032 PROSER2Q86WR7 435 aaPredicted RBP7.86□□□□□ -1.15
LEMD3-204ENST00000542032 CNKSR1Q969H4 720 aa7.86□□□□□ -1.15
LEMD3-204ENST00000542032 FHDC1Q9C0D6 1143 aaPredicted RBP7.86□□□□□ -1.15
LEMD3-204ENST00000542032 ESF1Q9H501 851 aaKnown RBP7.86□□□□□ -1.15
LEMD3-204ENST00000542032 RAB6BQ9NRW1 208 aa7.86□□□□□ -1.15
LEMD3-204ENST00000542032 LZTS3O60299 673 aaPredicted RBP7.85□□□□□ -1.15
LEMD3-204ENST00000542032 COBLO75128 1261 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 SCNN1DP51172 638 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 FOXD4L6Q3SYB3 417 aaPredicted RBP7.85□□□□□ -1.15
LEMD3-204ENST00000542032 WDR44Q5JSH3 913 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 FOXD4L3Q6VB84 417 aaPredicted RBP7.85□□□□□ -1.15
LEMD3-204ENST00000542032 PRICKLE2Q7Z3G6 844 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 ACDQ96AP0 544 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 NLRP3Q96P20 1036 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 UCN2Q96RP3 112 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 ETNK1Q9HBU6 452 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 MBIPQ9NS73 344 aa7.85□□□□□ -1.15
LEMD3-204ENST00000542032 WASLO00401 505 aaPredicted RBP7.84□□□□□ -1.15
LEMD3-204ENST00000542032 CENPCQ03188 943 aa7.84□□□□□ -1.15
LEMD3-204ENST00000542032 PCDHGA11Q9Y5H2 935 aa7.84□□□□□ -1.15
LEMD3-204ENST00000542032 C1QTNF9BB2RNN3 333 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 STAU1O95793 577 aaKnown RBP7.83□□□□□ -1.16
LEMD3-204ENST00000542032 SKIP12755 728 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 RHOQP17081 205 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 ESCO1Q5FWF5 840 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 HDGFL1Q5TGJ6 251 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 NBPF11Q86T75 865 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 ALYREFQ86V81 257 aaKnown RBP7.83□□□□□ -1.16
LEMD3-204ENST00000542032 ZFP64Q9NPA5 681 aa7.83□□□□□ -1.16
LEMD3-204ENST00000542032 CUEDC1Q9NWM3 386 aaPredicted RBP7.83□□□□□ -1.16
LEMD3-204ENST00000542032 DOC2BQ14184 412 aa7.82□□□□□ -1.16
LEMD3-204ENST00000542032 SLC27A3Q5K4L6 730 aa7.82□□□□□ -1.16
LEMD3-204ENST00000542032 NBPF10Q6P3W6 841 aaKnown RBP7.82□□□□□ -1.16
LEMD3-204ENST00000542032 NBPF15Q8N660 670 aa7.82□□□□□ -1.16
LEMD3-204ENST00000542032 DYRK1BQ9Y463 629 aa7.82□□□□□ -1.16
LEMD3-204ENST00000542032 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 INHAP05111 366 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 POU4F2Q12837 409 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 NCOA4Q13772 614 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 GRIN2CQ14957 1233 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 EML3Q32P44 896 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 PLEKHM2Q8IWE5 1019 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 KRTAP4-9Q9BYQ8 210 aa7.81□□□□□ -1.16
LEMD3-204ENST00000542032 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 GPR25O00155 361 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 GDF10P55107 478 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 ARTNQ5T4W7 220 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 TBC1D9Q6ZT07 1266 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 GLMNQ92990 594 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 SLC4A9Q96Q91 983 aa7.8□□□□□ -1.16
LEMD3-204ENST00000542032 ZSCAN10Q96SZ4 725 aaPredicted RBP7.8□□□□□ -1.16
LEMD3-204ENST00000542032 ATP9BO43861 1147 aa7.79□□□□□ -1.16
LEMD3-204ENST00000542032 TAS1R3Q7RTX0 852 aa7.79□□□□□ -1.16
LEMD3-204ENST00000542032 PPARGC1BQ86YN6 1023 aaKnown RBP7.79□□□□□ -1.16
LEMD3-204ENST00000542032 MKL2Q9ULH7 1088 aa7.79□□□□□ -1.16
LEMD3-204ENST00000542032 NOD1Q9Y239 953 aa7.79□□□□□ -1.16
LEMD3-204ENST00000542032 MTFR1Q15390 333 aa7.78□□□□□ -1.16
LEMD3-204ENST00000542032 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
LEMD3-204ENST00000542032 ZNF295-AS1Q8N0V1 137 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms