RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
SMAD3-204ENST00000540846 DCAF5Q96JK2 942 aa16.13■□□□□ 0.17
SMAD3-204ENST00000540846 SBF2Q86WG5 1849 aa16.13■□□□□ 0.17
SMAD3-204ENST00000540846 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
SMAD3-204ENST00000540846 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
SMAD3-204ENST00000540846 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
SMAD3-204ENST00000540846 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
SMAD3-204ENST00000540846 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
SMAD3-204ENST00000540846 CHL1O00533 1208 aa16.11■□□□□ 0.17
SMAD3-204ENST00000540846 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
SMAD3-204ENST00000540846 CT47B1P0C2W7 299 aaPredicted RBP16.11■□□□□ 0.17
SMAD3-204ENST00000540846 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
SMAD3-204ENST00000540846 CALD1Q05682 793 aaKnown RBP16.11■□□□□ 0.17
SMAD3-204ENST00000540846 POTEAQ6S8J7 498 aa16.11■□□□□ 0.17
SMAD3-204ENST00000540846 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
SMAD3-204ENST00000540846 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
SMAD3-204ENST00000540846 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
SMAD3-204ENST00000540846 NHSQ6T4R5 1651 aa16.1■□□□□ 0.17
SMAD3-204ENST00000540846 BCL9O00512 1426 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 RGS12O14924 1447 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
SMAD3-204ENST00000540846 SLC52A2Q9HAB3 445 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 GNAI1P63096 354 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 C20orf194Q5TEA3 1177 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 MBIPQ9NS73 344 aa16.09■□□□□ 0.17
SMAD3-204ENST00000540846 EP400Q96L91 3159 aa16.08■□□□□ 0.17
SMAD3-204ENST00000540846 BCAR3O75815 825 aa16.08■□□□□ 0.16
SMAD3-204ENST00000540846 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
SMAD3-204ENST00000540846 TAF7Q15545 349 aaPredicted RBP16.08■□□□□ 0.16
SMAD3-204ENST00000540846 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
SMAD3-204ENST00000540846 TEFQ10587 303 aa16.07■□□□□ 0.16
SMAD3-204ENST00000540846 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
SMAD3-204ENST00000540846 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
SMAD3-204ENST00000540846 C5P01031 1676 aa16.06■□□□□ 0.16
SMAD3-204ENST00000540846 KAT6BQ8WYB5 2073 aa16.06■□□□□ 0.16
SMAD3-204ENST00000540846 KCPQ6ZWJ8 1503 aa16.05■□□□□ 0.16
SMAD3-204ENST00000540846 A0A0G2JS52 829 aa16.05■□□□□ 0.16
SMAD3-204ENST00000540846 MYT1Q01538 1121 aa16.05■□□□□ 0.16
SMAD3-204ENST00000540846 NFATC2IPQ8NCF5 419 aa16.05■□□□□ 0.16
SMAD3-204ENST00000540846 LAS1LQ9Y4W2 734 aaKnown RBP16.05■□□□□ 0.16
SMAD3-204ENST00000540846 BTAF1O14981 1849 aa16.04■□□□□ 0.16
SMAD3-204ENST00000540846 RXRBP28702 533 aa16.04■□□□□ 0.16
SMAD3-204ENST00000540846 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
SMAD3-204ENST00000540846 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
SMAD3-204ENST00000540846 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
SMAD3-204ENST00000540846 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
SMAD3-204ENST00000540846 KCNQ3O43525 872 aa16.03■□□□□ 0.16
SMAD3-204ENST00000540846 CABP4P57796 275 aa16.03■□□□□ 0.16
SMAD3-204ENST00000540846 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
SMAD3-204ENST00000540846 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
SMAD3-204ENST00000540846 KRT24Q2M2I5 525 aa16.02■□□□□ 0.16
SMAD3-204ENST00000540846 FAM182BQ5T319 152 aa16.02■□□□□ 0.16
SMAD3-204ENST00000540846 LAMB4A4D0S4 1761 aa16.02■□□□□ 0.16
SMAD3-204ENST00000540846 PIGBQ92521 554 aa16.01■□□□□ 0.15
SMAD3-204ENST00000540846 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
SMAD3-204ENST00000540846 PRIM1P49642 420 aaKnown RBP16■□□□□ 0.15
SMAD3-204ENST00000540846 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
SMAD3-204ENST00000540846 SLC39A6Q13433 755 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 ZNF790Q6PG37 636 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 TSPYL6Q8N831 410 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 ZNF831Q5JPB2 1677 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
SMAD3-204ENST00000540846 TJP1Q07157 1748 aa15.99■□□□□ 0.15
SMAD3-204ENST00000540846 KCNQ2O43526 872 aa15.99■□□□□ 0.15
SMAD3-204ENST00000540846 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
SMAD3-204ENST00000540846 PTF1AQ7RTS3 328 aa15.99■□□□□ 0.15
SMAD3-204ENST00000540846 ZNF428Q96B54 188 aa15.99■□□□□ 0.15
SMAD3-204ENST00000540846 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
SMAD3-204ENST00000540846 LY75O60449 1722 aa15.99■□□□□ 0.15
SMAD3-204ENST00000540846 TNS1Q9HBL0 1735 aaKnown RBP15.98■□□□□ 0.15
SMAD3-204ENST00000540846 VAMP4O75379 141 aa15.97■□□□□ 0.15
SMAD3-204ENST00000540846 ATG3Q9NT62 314 aa15.97■□□□□ 0.15
SMAD3-204ENST00000540846 ASAP1Q9ULH1 1129 aa15.97■□□□□ 0.15
SMAD3-204ENST00000540846 ALDH1L2Q3SY69 923 aa15.96■□□□□ 0.15
SMAD3-204ENST00000540846 SSH1Q8WYL5 1049 aa15.96■□□□□ 0.15
SMAD3-204ENST00000540846 FRAT1Q92837 279 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-204ENST00000540846 ZNF496Q96IT1 587 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-204ENST00000540846 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
SMAD3-204ENST00000540846 SMC4Q9NTJ3 1288 aa15.96■□□□□ 0.15
SMAD3-204ENST00000540846 CACNA1FO60840 1977 aa15.96■□□□□ 0.15
SMAD3-204ENST00000540846 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.14
SMAD3-204ENST00000540846 COL5A3P25940 1745 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-204ENST00000540846 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-204ENST00000540846 PANK1Q8TE04 598 aa15.95■□□□□ 0.14
SMAD3-204ENST00000540846 SYTL4Q96C24 671 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-204ENST00000540846 SOS1Q07889 1333 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-204ENST00000540846 KIF16BQ96L93 1317 aa15.95■□□□□ 0.14
SMAD3-204ENST00000540846 ELL2O00472 640 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-204ENST00000540846 GIGYF1O75420 1035 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-204ENST00000540846 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
SMAD3-204ENST00000540846 FAM196AQ6ZSG2 479 aa15.94■□□□□ 0.14
SMAD3-204ENST00000540846 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
SMAD3-204ENST00000540846 PRAMEF22A3QJZ6 481 aa15.93■□□□□ 0.14
SMAD3-204ENST00000540846 HOXB7P09629 217 aa15.93■□□□□ 0.14
SMAD3-204ENST00000540846 MS4A1P11836 297 aa15.93■□□□□ 0.14
SMAD3-204ENST00000540846 AAMPQ13685 434 aa15.93■□□□□ 0.14
SMAD3-204ENST00000540846 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms