RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-211ENST00000539318 DCTN1Q14203 1278 aa11.81□□□□□ -0.52
NPIPB4-211ENST00000539318 NCBP3Q53F19 620 aaKnown RBP11.81□□□□□ -0.52
NPIPB4-211ENST00000539318 DEFB132Q7Z7B7 95 aa11.81□□□□□ -0.52
NPIPB4-211ENST00000539318 SIPA1L3O60292 1781 aaPredicted RBP11.81□□□□□ -0.52
NPIPB4-211ENST00000539318 CABP4P57796 275 aa11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 MCM10Q7L590 875 aa11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 SYTL4Q96C24 671 aaPredicted RBP11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 TMOD3Q9NYL9 352 aa11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 ASAP1Q9ULH1 1129 aa11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
NPIPB4-211ENST00000539318 MRC1P22897 1456 aa11.79□□□□□ -0.52
NPIPB4-211ENST00000539318 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-211ENST00000539318 LY75O60449 1722 aa11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 BAG6P46379 1132 aa11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 NEUROD2Q15784 382 aa11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 CCDC27Q2M243 656 aa11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 THUMPD2Q9BTF0 503 aaKnown RBP11.78□□□□□ -0.52
NPIPB4-211ENST00000539318 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.52
NPIPB4-211ENST00000539318 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.52
NPIPB4-211ENST00000539318 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-211ENST00000539318 SMARCC1Q92922 1105 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-211ENST00000539318 SLC4A9Q96Q91 983 aa11.77□□□□□ -0.53
NPIPB4-211ENST00000539318 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
NPIPB4-211ENST00000539318 LMOD3Q0VAK6 560 aa11.76□□□□□ -0.53
NPIPB4-211ENST00000539318 TEFQ10587 303 aa11.76□□□□□ -0.53
NPIPB4-211ENST00000539318 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
NPIPB4-211ENST00000539318 TXNRD1Q16881 649 aa11.76□□□□□ -0.53
NPIPB4-211ENST00000539318 KCNQ3O43525 872 aa11.75□□□□□ -0.53
NPIPB4-211ENST00000539318 WWC1Q8IX03 1113 aa11.75□□□□□ -0.53
NPIPB4-211ENST00000539318 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
NPIPB4-211ENST00000539318 BABAM1Q9NWV8 329 aa11.75□□□□□ -0.53
NPIPB4-211ENST00000539318 SENP3-EIF4A1A0A087X0R7 540 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 BTBD11A6QL63 1104 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 CHL1O00533 1208 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 SIK1P57059 783 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 RREB1Q92766 1687 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 TAF1LQ8IZX4 1826 aa11.74□□□□□ -0.53
NPIPB4-211ENST00000539318 KCNQ4P56696 695 aa11.73□□□□□ -0.53
NPIPB4-211ENST00000539318 ZNF831Q5JPB2 1677 aa11.73□□□□□ -0.53
NPIPB4-211ENST00000539318 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
NPIPB4-211ENST00000539318 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
NPIPB4-211ENST00000539318 KCPQ6ZWJ8 1503 aa11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 DCAF8L1A6NGE4 600 aa11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 ITPK1Q13572 414 aa11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 ZNF496Q96IT1 587 aaPredicted RBP11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
NPIPB4-211ENST00000539318 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.53
NPIPB4-211ENST00000539318 WDR63Q8IWG1 891 aa11.71□□□□□ -0.53
NPIPB4-211ENST00000539318 VSIG10Q8N0Z9 540 aa11.71□□□□□ -0.53
NPIPB4-211ENST00000539318 CCNL1Q9UK58 526 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-211ENST00000539318 KDM3BQ7LBC6 1761 aa11.71□□□□□ -0.54
NPIPB4-211ENST00000539318 NUP188Q5SRE5 1749 aa11.71□□□□□ -0.54
NPIPB4-211ENST00000539318 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
NPIPB4-211ENST00000539318 EIF4A1P60842 406 aaKnown RBP11.7□□□□□ -0.54
NPIPB4-211ENST00000539318 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
NPIPB4-211ENST00000539318 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
NPIPB4-211ENST00000539318 SALL2Q9Y467 1007 aaPredicted RBP11.7□□□□□ -0.54
NPIPB4-211ENST00000539318 IL16Q14005 1332 aa11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 CICQ96RK0 1608 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 GNAI1P63096 354 aa11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 LINC00116Q8NCU8 138 aa11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 SPINK5Q9NQ38 1064 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 IFT57Q9NWB7 429 aa11.69□□□□□ -0.54
NPIPB4-211ENST00000539318 GIGYF1O75420 1035 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 DNAJC10Q8IXB1 793 aa11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 FMNL2Q96PY5 1086 aa11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 ANO8Q9HCE9 1232 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 MBIPQ9NS73 344 aa11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 TSPYL4Q9UJ04 414 aa11.68□□□□□ -0.54
NPIPB4-211ENST00000539318 COL5A3P25940 1745 aaPredicted RBP11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 TJP1Q07157 1748 aa11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 PRAMEF22A3QJZ6 481 aa11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 CYP19A1P11511 503 aaPredicted RBP11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 HMGB2P26583 209 aaKnown RBP11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 SLC15A2Q16348 729 aa11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 TEX13AQ9BXU3 409 aaPredicted RBP11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 USP16Q9Y5T5 823 aa11.67□□□□□ -0.54
NPIPB4-211ENST00000539318 C5P01031 1676 aa11.66□□□□□ -0.54
NPIPB4-211ENST00000539318 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
NPIPB4-211ENST00000539318 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
NPIPB4-211ENST00000539318 INTS5Q6P9B9 1019 aaKnown RBP11.66□□□□□ -0.54
NPIPB4-211ENST00000539318 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms