RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 ABCC4O15439 1325 aa25.82■■□□□ 1.72
CDH5-202ENST00000539168 CACNA1FO60840 1977 aa25.81■■□□□ 1.72
CDH5-202ENST00000539168 COL16A1Q07092 1604 aaPredicted RBP25.81■■□□□ 1.72
CDH5-202ENST00000539168 DCAF5Q96JK2 942 aa25.8■■□□□ 1.72
CDH5-202ENST00000539168 SCN11AQ9UI33 1791 aa25.79■■□□□ 1.72
CDH5-202ENST00000539168 SIPA1L3O60292 1781 aaPredicted RBP25.79■■□□□ 1.72
CDH5-202ENST00000539168 IL2RBP14784 551 aa25.78■■□□□ 1.72
CDH5-202ENST00000539168 EIF4A1P60842 406 aaKnown RBP25.78■■□□□ 1.72
CDH5-202ENST00000539168 PCDH11XQ9BZA7 1347 aa25.78■■□□□ 1.72
CDH5-202ENST00000539168 PCDH11YQ9BZA8 1340 aa25.78■■□□□ 1.72
CDH5-202ENST00000539168 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
CDH5-202ENST00000539168 RWDD1Q9H446 243 aaPredicted RBP25.77■■□□□ 1.72
CDH5-202ENST00000539168 TCERG1O14776 1098 aaKnown RBP25.76■■□□□ 1.71
CDH5-202ENST00000539168 ZCRB1Q8TBF4 217 aaKnown RBP25.76■■□□□ 1.71
CDH5-202ENST00000539168 STRN4Q9NRL3 753 aa25.76■■□□□ 1.71
CDH5-202ENST00000539168 SLC52A2Q9HAB3 445 aa25.75■■□□□ 1.71
CDH5-202ENST00000539168 MRC1P22897 1456 aa25.75■■□□□ 1.71
CDH5-202ENST00000539168 LARP1Q6PKG0 1096 aaKnown RBP25.74■■□□□ 1.71
CDH5-202ENST00000539168 ZBTB40Q9NUA8 1239 aa25.74■■□□□ 1.71
CDH5-202ENST00000539168 BTG4Q9NY30 223 aa25.74■■□□□ 1.71
CDH5-202ENST00000539168 KDM6AO15550 1401 aaPredicted RBP25.74■■□□□ 1.71
CDH5-202ENST00000539168 CYP27B1O15528 508 aa25.73■■□□□ 1.71
CDH5-202ENST00000539168 INTS3Q68E01 1043 aaKnown RBP25.73■■□□□ 1.71
CDH5-202ENST00000539168 TSHZ2Q9NRE2 1034 aa25.73■■□□□ 1.71
CDH5-202ENST00000539168 UBAP1LF5GYI3 381 aa25.72■■□□□ 1.71
CDH5-202ENST00000539168 HDGFL1Q5TGJ6 251 aa25.72■■□□□ 1.71
CDH5-202ENST00000539168 PIP4K2BP78356 416 aa25.71■■□□□ 1.71
CDH5-202ENST00000539168 PCDHB15Q9Y5E8 787 aa25.71■■□□□ 1.71
CDH5-202ENST00000539168 HEG1Q9ULI3 1381 aa25.7■■□□□ 1.7
CDH5-202ENST00000539168 ZBTB7BO15156 539 aaPredicted RBP25.7■■□□□ 1.7
CDH5-202ENST00000539168 HDAC1Q13547 482 aaPredicted RBP25.7■■□□□ 1.7
CDH5-202ENST00000539168 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
CDH5-202ENST00000539168 RGS12O14924 1447 aa25.69■■□□□ 1.7
CDH5-202ENST00000539168 IGHDP01880 384 aa25.68■■□□□ 1.7
CDH5-202ENST00000539168 CCT4P50991 539 aaKnown RBP25.68■■□□□ 1.7
CDH5-202ENST00000539168 ERVV-2B6SEH9 535 aa25.67■■□□□ 1.7
CDH5-202ENST00000539168 FLIIQ13045 1269 aa25.67■■□□□ 1.7
CDH5-202ENST00000539168 ZNF790Q6PG37 636 aa25.67■■□□□ 1.7
CDH5-202ENST00000539168 GIGYF1O75420 1035 aaPredicted RBP25.65■■□□□ 1.7
CDH5-202ENST00000539168 CABP4P57796 275 aa25.65■■□□□ 1.7
CDH5-202ENST00000539168 PLCH1Q4KWH8 1693 aa25.65■■□□□ 1.7
CDH5-202ENST00000539168 NFATC2IPQ8NCF5 419 aa25.64■■□□□ 1.7
CDH5-202ENST00000539168 CDCA7Q9BWT1 371 aaPredicted RBP25.64■■□□□ 1.7
CDH5-202ENST00000539168 KCNQ3O43525 872 aa25.64■■□□□ 1.69
CDH5-202ENST00000539168 TTC5Q8N0Z6 440 aa25.64■■□□□ 1.69
CDH5-202ENST00000539168 DBF4Q9UBU7 674 aaPredicted RBP25.64■■□□□ 1.69
CDH5-202ENST00000539168 PXDNLA1KZ92 1463 aa25.64■■□□□ 1.69
CDH5-202ENST00000539168 FKBP5Q13451 457 aaPredicted RBP25.62■■□□□ 1.69
CDH5-202ENST00000539168 G2E3Q7L622 706 aa25.62■■□□□ 1.69
CDH5-202ENST00000539168 THRAP3Q9Y2W1 955 aaKnown RBP25.62■■□□□ 1.69
CDH5-202ENST00000539168 EIF2S2P20042 333 aaKnown RBP25.61■■□□□ 1.69
CDH5-202ENST00000539168 DISP2A7MBM2 1401 aa25.61■■□□□ 1.69
CDH5-202ENST00000539168 JCADQ9P266 1359 aa25.61■■□□□ 1.69
CDH5-202ENST00000539168 NWD2Q9ULI1 1742 aa25.6■■□□□ 1.69
CDH5-202ENST00000539168 SHANK3Q9BYB0 1731 aa25.6■■□□□ 1.69
CDH5-202ENST00000539168 FMNL2Q96PY5 1086 aa25.59■■□□□ 1.69
CDH5-202ENST00000539168 CERKQ8TCT0 537 aa25.58■■□□□ 1.69
CDH5-202ENST00000539168 NECTIN2Q92692 538 aa25.58■■□□□ 1.69
CDH5-202ENST00000539168 NRAPQ86VF7 1730 aa25.58■■□□□ 1.68
CDH5-202ENST00000539168 ADAMTS2O95450 1211 aa25.58■■□□□ 1.68
CDH5-202ENST00000539168 HYPKQ9NX55 129 aa25.58■■□□□ 1.68
CDH5-202ENST00000539168 SNRPA1P09661 255 aaKnown RBP25.57■■□□□ 1.68
CDH5-202ENST00000539168 CHPF2Q9P2E5 772 aa25.57■■□□□ 1.68
CDH5-202ENST00000539168 USP35Q9P2H5 1018 aa25.57■■□□□ 1.68
CDH5-202ENST00000539168 N4BP2Q86UW6 1770 aaPredicted RBP25.57■■□□□ 1.68
CDH5-202ENST00000539168 DDX54Q8TDD1 881 aaKnown RBP25.56■■□□□ 1.68
CDH5-202ENST00000539168 SMC5Q8IY18 1101 aa25.55■■□□□ 1.68
CDH5-202ENST00000539168 SLC4A10Q6U841 1118 aa25.55■■□□□ 1.68
CDH5-202ENST00000539168 RPAP2Q8IXW5 612 aaPredicted RBP25.55■■□□□ 1.68
CDH5-202ENST00000539168 GCC1Q96CN9 775 aa25.55■■□□□ 1.68
CDH5-202ENST00000539168 WNK3Q9BYP7 1800 aa25.54■■□□□ 1.68
CDH5-202ENST00000539168 SLIT2O94813 1529 aa25.54■■□□□ 1.68
CDH5-202ENST00000539168 SLC39A6Q13433 755 aa25.54■■□□□ 1.68
CDH5-202ENST00000539168 DDX21Q9NR30 783 aaKnown RBP eCLIP25.54■■□□□ 1.68
CDH5-202ENST00000539168 NUTM2BA6NNL0 878 aaPredicted RBP25.53■■□□□ 1.68
CDH5-202ENST00000539168 NUTM2EB1AL46 878 aaPredicted RBP25.53■■□□□ 1.68
CDH5-202ENST00000539168 EXOC5O00471 708 aa25.53■■□□□ 1.68
CDH5-202ENST00000539168 GNAI3P08754 354 aa25.53■■□□□ 1.68
CDH5-202ENST00000539168 NUTM2AQ8IVF1 878 aaPredicted RBP25.53■■□□□ 1.68
CDH5-202ENST00000539168 SPATA31A6Q5VVP1 1343 aa25.53■■□□□ 1.68
CDH5-202ENST00000539168 ZNF496Q96IT1 587 aaPredicted RBP25.52■■□□□ 1.68
CDH5-202ENST00000539168 LRP6O75581 1613 aa25.52■■□□□ 1.68
CDH5-202ENST00000539168 SPATA31A1Q5TZJ5 1347 aa25.52■■□□□ 1.68
CDH5-202ENST00000539168 F6X3S4 739 aa25.52■■□□□ 1.68
CDH5-202ENST00000539168 DDX58O95786 925 aaKnown RBP25.52■■□□□ 1.68
CDH5-202ENST00000539168 PHAXQ9H814 394 aaKnown RBP25.51■■□□□ 1.67
CDH5-202ENST00000539168 ERBB4Q15303 1308 aa25.5■■□□□ 1.67
CDH5-202ENST00000539168 TNS2Q63HR2 1409 aa25.5■■□□□ 1.67
CDH5-202ENST00000539168 PAPPAQ13219 1627 aa25.5■■□□□ 1.67
CDH5-202ENST00000539168 PDZRN3Q9UPQ7 1066 aa25.49■■□□□ 1.67
CDH5-202ENST00000539168 RBM19Q9Y4C8 960 aaKnown RBP25.49■■□□□ 1.67
CDH5-202ENST00000539168 ATP10DQ9P241 1426 aa25.49■■□□□ 1.67
CDH5-202ENST00000539168 DNAAF4Q8WXU2 420 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 TMOD3Q9NYL9 352 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 UBR2Q8IWV8 1755 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 BARGINQ6ZT62 677 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 ANKRD44Q8N8A2 993 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 SRCIN1Q9C0H9 1055 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 SPATA31A5Q5VU36 1347 aa25.48■■□□□ 1.67
CDH5-202ENST00000539168 SPATA31A7Q8IWB4 1347 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms