RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CABP4P57796 275 aa23.11■■□□□ 1.29
SFSWAP-205ENST00000537164 MTHFSDQ2M296 383 aaKnown RBP23.11■■□□□ 1.29
SFSWAP-205ENST00000537164 ATF5Q9Y2D1 282 aaPredicted RBP23.1■■□□□ 1.29
SFSWAP-205ENST00000537164 CICQ96RK0 1608 aaPredicted RBP23.09■■□□□ 1.29
SFSWAP-205ENST00000537164 ZEB1P37275 1124 aaPredicted RBP23.09■■□□□ 1.29
SFSWAP-205ENST00000537164 NUDCQ9Y266 331 aa23.09■■□□□ 1.29
SFSWAP-205ENST00000537164 COL5A3P25940 1745 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-205ENST00000537164 NFATC2IPQ8NCF5 419 aa23.08■■□□□ 1.29
SFSWAP-205ENST00000537164 PPP1R1BQ9UD71 204 aaPredicted RBP23.08■■□□□ 1.29
SFSWAP-205ENST00000537164 ITPK1Q13572 414 aa23.07■■□□□ 1.28
SFSWAP-205ENST00000537164 FLAD1Q8NFF5 587 aa23.07■■□□□ 1.28
SFSWAP-205ENST00000537164 RSPH6AQ9H0K4 717 aa23.07■■□□□ 1.28
SFSWAP-205ENST00000537164 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 ATP6V1AP38606 617 aa23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 COL23A1Q86Y22 540 aaPredicted RBP23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 SLC4A9Q96Q91 983 aa23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 LGR6Q9HBX8 967 aa23.06■■□□□ 1.28
SFSWAP-205ENST00000537164 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
SFSWAP-205ENST00000537164 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
SFSWAP-205ENST00000537164 FCHSD2O94868 740 aa23.03■■□□□ 1.28
SFSWAP-205ENST00000537164 RALBP1Q15311 655 aa23.03■■□□□ 1.28
SFSWAP-205ENST00000537164 AK7Q96M32 723 aa23.03■■□□□ 1.28
SFSWAP-205ENST00000537164 MAP3K5Q99683 1374 aa23.02■■□□□ 1.28
SFSWAP-205ENST00000537164 SIPA1L3O60292 1781 aaPredicted RBP23.02■■□□□ 1.28
SFSWAP-205ENST00000537164 PRKAR2BP31323 418 aa23.02■■□□□ 1.28
SFSWAP-205ENST00000537164 AMIGO3Q86WK7 504 aa23.02■■□□□ 1.28
SFSWAP-205ENST00000537164 U2AF1L5P0DN76 240 aaPredicted RBP23.01■■□□□ 1.27
SFSWAP-205ENST00000537164 SSFA2P28290 1259 aa23.01■■□□□ 1.27
SFSWAP-205ENST00000537164 U2AF1Q01081 240 aaKnown RBP eCLIP23.01■■□□□ 1.27
SFSWAP-205ENST00000537164 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
SFSWAP-205ENST00000537164 TJP1Q07157 1748 aa23.01■■□□□ 1.27
SFSWAP-205ENST00000537164 MYH14Q7Z406 1995 aaKnown RBP23■■□□□ 1.27
SFSWAP-205ENST00000537164 UBR2Q8IWV8 1755 aa23■■□□□ 1.27
SFSWAP-205ENST00000537164 GNAT3A8MTJ3 354 aa23■■□□□ 1.27
SFSWAP-205ENST00000537164 RC3H1Q5TC82 1133 aaKnown RBP23■■□□□ 1.27
SFSWAP-205ENST00000537164 ARXQ96QS3 562 aa23■■□□□ 1.27
SFSWAP-205ENST00000537164 RBM42Q9BTD8 480 aaKnown RBP23■■□□□ 1.27
SFSWAP-205ENST00000537164 CEMIPQ8WUJ3 1361 aa22.99■■□□□ 1.27
SFSWAP-205ENST00000537164 CNTNAP4Q9C0A0 1308 aa22.98■■□□□ 1.27
SFSWAP-205ENST00000537164 KCPQ6ZWJ8 1503 aa22.98■■□□□ 1.27
SFSWAP-205ENST00000537164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.97■■□□□ 1.27
SFSWAP-205ENST00000537164 PTCD1O75127 700 aaKnown RBP22.97■■□□□ 1.27
SFSWAP-205ENST00000537164 POLD1P28340 1107 aa22.97■■□□□ 1.27
SFSWAP-205ENST00000537164 IL17REQ8NFR9 667 aa22.97■■□□□ 1.27
SFSWAP-205ENST00000537164 FHDC1Q9C0D6 1143 aaPredicted RBP22.97■■□□□ 1.27
SFSWAP-205ENST00000537164 GNPATO15228 680 aa22.96■■□□□ 1.27
SFSWAP-205ENST00000537164 MSH5O43196 834 aa22.96■■□□□ 1.27
SFSWAP-205ENST00000537164 SYT17Q9BSW7 474 aa22.96■■□□□ 1.27
SFSWAP-205ENST00000537164 MYBBP1AQ9BQG0 1328 aaKnown RBP22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 RPS6KA4O75676 772 aa22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 PHF14O94880 888 aa22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 ADRA2BP18089 450 aa22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 SLC39A6Q13433 755 aa22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 SMIM5Q71RC9 77 aa22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 VSIG10Q8N0Z9 540 aa22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
SFSWAP-205ENST00000537164 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
SFSWAP-205ENST00000537164 DLG5Q8TDM6 1919 aa22.91■■□□□ 1.26
SFSWAP-205ENST00000537164 HTATSF1O43719 755 aaKnown RBP22.91■■□□□ 1.26
SFSWAP-205ENST00000537164 TEFQ10587 303 aa22.91■■□□□ 1.26
SFSWAP-205ENST00000537164 PLEKHF1Q96S99 279 aa22.91■■□□□ 1.26
SFSWAP-205ENST00000537164 UTRNP46939 3433 aa22.91■■□□□ 1.26
SFSWAP-205ENST00000537164 CRKLP46109 303 aaKnown RBP22.9■■□□□ 1.26
SFSWAP-205ENST00000537164 GOLGB1Q14789 3259 aaKnown RBP22.9■■□□□ 1.26
SFSWAP-205ENST00000537164 TRAPPC3LQ5T215 181 aa22.89■■□□□ 1.25
SFSWAP-205ENST00000537164 MSL1Q68DK7 614 aa22.89■■□□□ 1.25
SFSWAP-205ENST00000537164 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
SFSWAP-205ENST00000537164 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-205ENST00000537164 DNAJC10Q8IXB1 793 aa22.87■■□□□ 1.25
SFSWAP-205ENST00000537164 ARHGEF1Q92888 912 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-205ENST00000537164 PNNQ9H307 717 aaKnown RBP22.87■■□□□ 1.25
SFSWAP-205ENST00000537164 CYP19A1P11511 503 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-205ENST00000537164 TTC5Q8N0Z6 440 aa22.86■■□□□ 1.25
SFSWAP-205ENST00000537164 PRKRIP1Q9H875 184 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-205ENST00000537164 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
SFSWAP-205ENST00000537164 NEFMP07197 916 aa22.84■■□□□ 1.25
SFSWAP-205ENST00000537164 CCDC87Q9NVE4 849 aa22.84■■□□□ 1.25
SFSWAP-205ENST00000537164 DCAF8L1A6NGE4 600 aa22.83■■□□□ 1.25
SFSWAP-205ENST00000537164 MCM10Q7L590 875 aa22.83■■□□□ 1.25
SFSWAP-205ENST00000537164 ZNF496Q96IT1 587 aaPredicted RBP22.83■■□□□ 1.25
SFSWAP-205ENST00000537164 HEG1Q9ULI3 1381 aa22.83■■□□□ 1.25
SFSWAP-205ENST00000537164 NLGN1Q8N2Q7 840 aa22.82■■□□□ 1.24
SFSWAP-205ENST00000537164 CD2APQ9Y5K6 639 aa22.82■■□□□ 1.24
SFSWAP-205ENST00000537164 BTBD11A6QL63 1104 aa22.81■■□□□ 1.24
SFSWAP-205ENST00000537164 GYS1P13807 737 aa22.81■■□□□ 1.24
SFSWAP-205ENST00000537164 RFC4P35249 363 aa22.81■■□□□ 1.24
SFSWAP-205ENST00000537164 NFE2L2Q16236 605 aa22.81■■□□□ 1.24
SFSWAP-205ENST00000537164 TEX13AQ9BXU3 409 aaPredicted RBP22.81■■□□□ 1.24
SFSWAP-205ENST00000537164 SOS1Q07889 1333 aaPredicted RBP22.81■■□□□ 1.24
SFSWAP-205ENST00000537164 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
SFSWAP-205ENST00000537164 KIF13BQ9NQT8 1826 aa22.8■■□□□ 1.24
SFSWAP-205ENST00000537164 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
SFSWAP-205ENST00000537164 NLGN2Q8NFZ4 835 aa22.79■■□□□ 1.24
SFSWAP-205ENST00000537164 USP42Q9H9J4 1324 aaKnown RBP22.79■■□□□ 1.24
SFSWAP-205ENST00000537164 STARD3NLO95772 234 aa22.78■■□□□ 1.24
SFSWAP-205ENST00000537164 MAPK8IP3Q9UPT6 1336 aa22.78■■□□□ 1.24
SFSWAP-205ENST00000537164 KDM3BQ7LBC6 1761 aa22.77■■□□□ 1.24
SFSWAP-205ENST00000537164 KCNQ3O43525 872 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms