RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 KIF24Q5T7B8 1368 aa7.39□□□□□ -1.23
SNHG1-204ENST00000537068 UBR3Q6ZT12 1888 aa7.38□□□□□ -1.23
SNHG1-204ENST00000537068 TOGARAM1Q9Y4F4 1720 aa7.38□□□□□ -1.23
SNHG1-204ENST00000537068 NCAPD2Q15021 1401 aa7.38□□□□□ -1.23
SNHG1-204ENST00000537068 AMPHP49418 695 aa7.38□□□□□ -1.23
SNHG1-204ENST00000537068 LTV1Q96GA3 475 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-204ENST00000537068 FARP1Q9Y4F1 1045 aaPredicted RBP7.38□□□□□ -1.23
SNHG1-204ENST00000537068 INSRP06213 1382 aa7.37□□□□□ -1.23
SNHG1-204ENST00000537068 RIOK3O14730 519 aaKnown RBP7.37□□□□□ -1.23
SNHG1-204ENST00000537068 CLCN6P51797 869 aa7.37□□□□□ -1.23
SNHG1-204ENST00000537068 KCNQ4P56696 695 aa7.37□□□□□ -1.23
SNHG1-204ENST00000537068 RRS1Q15050 365 aaKnown RBP7.37□□□□□ -1.23
SNHG1-204ENST00000537068 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
SNHG1-204ENST00000537068 USP47Q96K76 1375 aa7.36□□□□□ -1.23
SNHG1-204ENST00000537068 C4BP0C0L5 1744 aa7.36□□□□□ -1.23
SNHG1-204ENST00000537068 HMGB2P26583 209 aaKnown RBP7.36□□□□□ -1.23
SNHG1-204ENST00000537068 POLD1P28340 1107 aa7.36□□□□□ -1.23
SNHG1-204ENST00000537068 C1QTNF8P60827 252 aa7.36□□□□□ -1.23
SNHG1-204ENST00000537068 NKX1-1Q15270 411 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-204ENST00000537068 COL23A1Q86Y22 540 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-204ENST00000537068 SYTL4Q96C24 671 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-204ENST00000537068 GGNBP2Q9H3C7 697 aa7.36□□□□□ -1.23
SNHG1-204ENST00000537068 CCNL1Q9UK58 526 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-204ENST00000537068 FLT4P35916 1363 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 ZNF831Q5JPB2 1677 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 CYP27B1O15528 508 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 PYGBP11216 843 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 TMF1P82094 1093 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 GPR162Q16538 588 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 HSP90AB2PQ58FF8 381 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 NLGN2Q8NFZ4 835 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 CARD14Q9BXL6 1004 aa7.35□□□□□ -1.23
SNHG1-204ENST00000537068 KIF13BQ9NQT8 1826 aa7.34□□□□□ -1.23
SNHG1-204ENST00000537068 PCDH11XQ9BZA7 1347 aa7.34□□□□□ -1.23
SNHG1-204ENST00000537068 PCDH11YQ9BZA8 1340 aa7.34□□□□□ -1.23
SNHG1-204ENST00000537068 YBX3P16989 372 aaKnown RBP eCLIP7.34□□□□□ -1.23
SNHG1-204ENST00000537068 TATP17735 454 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-204ENST00000537068 USHBP1Q8N6Y0 703 aa7.34□□□□□ -1.23
SNHG1-204ENST00000537068 FLAD1Q8NFF5 587 aa7.34□□□□□ -1.23
SNHG1-204ENST00000537068 RAPGEF4Q8WZA2 1011 aa7.34□□□□□ -1.23
SNHG1-204ENST00000537068 SMG6Q86US8 1419 aaKnown RBP7.34□□□□□ -1.23
SNHG1-204ENST00000537068 STK25O00506 426 aa7.33□□□□□ -1.24
SNHG1-204ENST00000537068 GRIN3BO60391 1043 aa7.33□□□□□ -1.24
SNHG1-204ENST00000537068 CDCA8Q53HL2 280 aa7.33□□□□□ -1.24
SNHG1-204ENST00000537068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.33□□□□□ -1.24
SNHG1-204ENST00000537068 CD2APQ9Y5K6 639 aa7.33□□□□□ -1.24
SNHG1-204ENST00000537068 PALLDQ8WX93 1383 aa7.33□□□□□ -1.24
SNHG1-204ENST00000537068 PLEKHG2Q9H7P9 1386 aa7.33□□□□□ -1.24
SNHG1-204ENST00000537068 KIAA1551Q9HCM1 1747 aa7.32□□□□□ -1.24
SNHG1-204ENST00000537068 WASHC2AQ641Q2 1341 aa7.32□□□□□ -1.24
SNHG1-204ENST00000537068 AMIGO3Q86WK7 504 aa7.32□□□□□ -1.24
SNHG1-204ENST00000537068 SMARCC1Q92922 1105 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-204ENST00000537068 TIMELESSQ9UNS1 1208 aa7.32□□□□□ -1.24
SNHG1-204ENST00000537068 EMILIN1Q9Y6C2 1016 aa7.32□□□□□ -1.24
SNHG1-204ENST00000537068 GOLGB1Q14789 3259 aaKnown RBP7.32□□□□□ -1.24
SNHG1-204ENST00000537068 CD44P16070 742 aaKnown RBP7.31□□□□□ -1.24
SNHG1-204ENST00000537068 COL5A3P25940 1745 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-204ENST00000537068 MPRIPQ6WCQ1 1025 aa7.31□□□□□ -1.24
SNHG1-204ENST00000537068 PIGBQ92521 554 aa7.31□□□□□ -1.24
SNHG1-204ENST00000537068 BRCA1P38398 1863 aaKnown RBP7.3□□□□□ -1.24
SNHG1-204ENST00000537068 EYA1Q99502 592 aa7.3□□□□□ -1.24
SNHG1-204ENST00000537068 POLKQ9UBT6 870 aa7.3□□□□□ -1.24
SNHG1-204ENST00000537068 TAOK2Q9UL54 1235 aa7.3□□□□□ -1.24
SNHG1-204ENST00000537068 ADCY9O60503 1353 aa7.3□□□□□ -1.24
SNHG1-204ENST00000537068 MYH14Q7Z406 1995 aaKnown RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 NSD3Q9BZ95 1437 aa7.29□□□□□ -1.24
SNHG1-204ENST00000537068 N4BP2Q86UW6 1770 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 SENP3-EIF4A1A0A087X0R7 540 aa7.29□□□□□ -1.24
SNHG1-204ENST00000537068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 CHRM1P11229 460 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 SSFA2P28290 1259 aa7.29□□□□□ -1.24
SNHG1-204ENST00000537068 MSL1Q68DK7 614 aa7.29□□□□□ -1.24
SNHG1-204ENST00000537068 ZFP91Q96JP5 570 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 TSPYL2Q9H2G4 693 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 SPG7Q9UQ90 795 aa7.29□□□□□ -1.24
SNHG1-204ENST00000537068 CICQ96RK0 1608 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 VIRMAQ69YN4 1812 aaKnown RBP7.29□□□□□ -1.24
SNHG1-204ENST00000537068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.28□□□□□ -1.24
SNHG1-204ENST00000537068 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 PRKCSHP14314 528 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-204ENST00000537068 PHKG2P15735 406 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 SIK1P57059 783 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 TRIM26Q12899 539 aaPredicted RBP7.28□□□□□ -1.24
SNHG1-204ENST00000537068 IFNL2Q8IZJ0 200 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 LINC00116Q8NCU8 138 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 ASAP1Q9ULH1 1129 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 STK24Q9Y6E0 443 aa7.28□□□□□ -1.24
SNHG1-204ENST00000537068 ATP10DQ9P241 1426 aa7.27□□□□□ -1.24
SNHG1-204ENST00000537068 C4AP0C0L4 1744 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 ARFGEF1Q9Y6D6 1849 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 ITPK1Q13572 414 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 EIF4A2Q14240 407 aaKnown RBP7.27□□□□□ -1.25
SNHG1-204ENST00000537068 SMIM5Q71RC9 77 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 PELP1Q8IZL8 1130 aaKnown RBP7.27□□□□□ -1.25
SNHG1-204ENST00000537068 AK7Q96M32 723 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 SLC4A9Q96Q91 983 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 ATG3Q9NT62 314 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 KDRP35968 1356 aa7.27□□□□□ -1.25
SNHG1-204ENST00000537068 ADAMTS7Q9UKP4 1686 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms