RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 HMGB2P26583 209 aaKnown RBP24.42■■□□□ 1.5
LTBR-206ENST00000536876 ZNF526Q8TF50 670 aaPredicted RBP24.42■■□□□ 1.5
LTBR-206ENST00000536876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.41■■□□□ 1.5
LTBR-206ENST00000536876 TMOD3Q9NYL9 352 aa24.41■■□□□ 1.5
LTBR-206ENST00000536876 GNPATO15228 680 aa24.4■■□□□ 1.5
LTBR-206ENST00000536876 SLC4A9Q96Q91 983 aa24.4■■□□□ 1.5
LTBR-206ENST00000536876 ATG3Q9NT62 314 aa24.4■■□□□ 1.5
LTBR-206ENST00000536876 POLKQ9UBT6 870 aa24.4■■□□□ 1.5
LTBR-206ENST00000536876 C10orf71Q711Q0 1435 aa24.4■■□□□ 1.5
LTBR-206ENST00000536876 IFFO2Q5TF58 517 aa24.39■■□□□ 1.49
LTBR-206ENST00000536876 PLEKHG2Q9H7P9 1386 aa24.39■■□□□ 1.49
LTBR-206ENST00000536876 TJP1Q07157 1748 aa24.38■■□□□ 1.49
LTBR-206ENST00000536876 KDM6AO15550 1401 aaPredicted RBP24.37■■□□□ 1.49
LTBR-206ENST00000536876 ATP6V1AP38606 617 aa24.37■■□□□ 1.49
LTBR-206ENST00000536876 EIF4A2Q14240 407 aaKnown RBP24.37■■□□□ 1.49
LTBR-206ENST00000536876 ARFGEF1Q9Y6D6 1849 aa24.37■■□□□ 1.49
LTBR-206ENST00000536876 KIF3CO14782 793 aa24.36■■□□□ 1.49
LTBR-206ENST00000536876 HSPA6P17066 643 aa24.36■■□□□ 1.49
LTBR-206ENST00000536876 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
LTBR-206ENST00000536876 ADAMTS7Q9UKP4 1686 aa24.36■■□□□ 1.49
LTBR-206ENST00000536876 MMP10P09238 476 aa24.35■■□□□ 1.49
LTBR-206ENST00000536876 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
LTBR-206ENST00000536876 VIRMAQ69YN4 1812 aaKnown RBP24.31■■□□□ 1.48
LTBR-206ENST00000536876 CNTNAP4Q9C0A0 1308 aa24.29■■□□□ 1.48
LTBR-206ENST00000536876 TNNT2P45379 298 aaPredicted RBP24.28■■□□□ 1.48
LTBR-206ENST00000536876 GYS1P13807 737 aa24.26■■□□□ 1.47
LTBR-206ENST00000536876 ARHGEF1Q92888 912 aaKnown RBP24.26■■□□□ 1.47
LTBR-206ENST00000536876 RTCBQ9Y3I0 505 aaKnown RBP24.26■■□□□ 1.47
LTBR-206ENST00000536876 WDR90Q96KV7 1748 aa24.26■■□□□ 1.47
LTBR-206ENST00000536876 A0A0G2JLW4 131 aa24.25■■□□□ 1.47
LTBR-206ENST00000536876 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
LTBR-206ENST00000536876 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
LTBR-206ENST00000536876 RC3H1Q5TC82 1133 aaKnown RBP24.24■■□□□ 1.47
LTBR-206ENST00000536876 SBF1O95248 1867 aa24.24■■□□□ 1.47
LTBR-206ENST00000536876 DPEP1P16444 411 aa24.23■■□□□ 1.47
LTBR-206ENST00000536876 ADRA2BP18089 450 aa24.23■■□□□ 1.47
LTBR-206ENST00000536876 TGFB2P61812 414 aa24.23■■□□□ 1.47
LTBR-206ENST00000536876 DCAF5Q96JK2 942 aa24.23■■□□□ 1.47
LTBR-206ENST00000536876 RBM42Q9BTD8 480 aaKnown RBP24.23■■□□□ 1.47
LTBR-206ENST00000536876 BCS1LQ9Y276 419 aa24.23■■□□□ 1.47
LTBR-206ENST00000536876 AEBP1Q8IUX7 1158 aa24.22■■□□□ 1.47
LTBR-206ENST00000536876 NLGN1Q8N2Q7 840 aa24.22■■□□□ 1.47
LTBR-206ENST00000536876 AFDNP55196 1824 aaKnown RBP24.21■■□□□ 1.47
LTBR-206ENST00000536876 RPS6KA4O75676 772 aa24.21■■□□□ 1.47
LTBR-206ENST00000536876 KCNA3P22001 575 aa24.21■■□□□ 1.47
LTBR-206ENST00000536876 ZNF530Q6P9A1 599 aaPredicted RBP24.2■■□□□ 1.46
LTBR-206ENST00000536876 DLEC1Q9Y238 1755 aa24.19■■□□□ 1.46
LTBR-206ENST00000536876 NRXN2Q9P2S2 1712 aa24.18■■□□□ 1.46
LTBR-206ENST00000536876 HSP90AB1P08238 724 aaKnown RBP24.18■■□□□ 1.46
LTBR-206ENST00000536876 POLR3GLQ9BT43 218 aa24.18■■□□□ 1.46
LTBR-206ENST00000536876 NMRK2Q9NPI5 230 aa24.18■■□□□ 1.46
LTBR-206ENST00000536876 CCDC87Q9NVE4 849 aa24.18■■□□□ 1.46
LTBR-206ENST00000536876 TNRC6CQ9HCJ0 1690 aaKnown RBP24.18■■□□□ 1.46
LTBR-206ENST00000536876 DDR1Q08345 913 aa24.17■■□□□ 1.46
LTBR-206ENST00000536876 SRP68Q9UHB9 627 aaKnown RBP24.17■■□□□ 1.46
LTBR-206ENST00000536876 MRC1P22897 1456 aa24.17■■□□□ 1.46
LTBR-206ENST00000536876 RFC4P35249 363 aa24.16■■□□□ 1.46
LTBR-206ENST00000536876 CRKLP46109 303 aaKnown RBP24.16■■□□□ 1.46
LTBR-206ENST00000536876 PLEKHO1Q53GL0 409 aaPredicted RBP24.16■■□□□ 1.46
LTBR-206ENST00000536876 USP42Q9H9J4 1324 aaKnown RBP24.15■■□□□ 1.46
LTBR-206ENST00000536876 CABP4P57796 275 aa24.15■■□□□ 1.46
LTBR-206ENST00000536876 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
LTBR-206ENST00000536876 ARHGAP27Q6ZUM4 889 aa24.15■■□□□ 1.46
LTBR-206ENST00000536876 TIMELESSQ9UNS1 1208 aa24.15■■□□□ 1.46
LTBR-206ENST00000536876 UBR2Q8IWV8 1755 aa24.14■■□□□ 1.46
LTBR-206ENST00000536876 PTCD1O75127 700 aaKnown RBP24.14■■□□□ 1.45
LTBR-206ENST00000536876 FCHSD2O94868 740 aa24.14■■□□□ 1.45
LTBR-206ENST00000536876 FKBP8Q14318 412 aa24.14■■□□□ 1.45
LTBR-206ENST00000536876 DNAJC5GQ8N7S2 189 aa24.14■■□□□ 1.45
LTBR-206ENST00000536876 PANK3Q9H999 370 aa24.14■■□□□ 1.45
LTBR-206ENST00000536876 PARP3Q9Y6F1 533 aa24.14■■□□□ 1.45
LTBR-206ENST00000536876 KCPQ6ZWJ8 1503 aa24.14■■□□□ 1.45
LTBR-206ENST00000536876 TOMM70O94826 608 aa24.13■■□□□ 1.45
LTBR-206ENST00000536876 APLP1P51693 650 aa24.13■■□□□ 1.45
LTBR-206ENST00000536876 AMOTQ4VCS5 1084 aa24.13■■□□□ 1.45
LTBR-206ENST00000536876 MTHFSP49914 203 aa24.11■■□□□ 1.45
LTBR-206ENST00000536876 C9orf131Q5VYM1 1079 aa24.11■■□□□ 1.45
LTBR-206ENST00000536876 NFATC2IPQ8NCF5 419 aa24.11■■□□□ 1.45
LTBR-206ENST00000536876 TIAM2Q8IVF5 1701 aa24.1■■□□□ 1.45
LTBR-206ENST00000536876 INTS5Q6P9B9 1019 aaKnown RBP24.1■■□□□ 1.45
LTBR-206ENST00000536876 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
LTBR-206ENST00000536876 POLRMTO00411 1230 aaKnown RBP24.08■■□□□ 1.45
LTBR-206ENST00000536876 CHRNA5P30532 468 aa24.08■■□□□ 1.45
LTBR-206ENST00000536876 IL13P35225 146 aa24.08■■□□□ 1.45
LTBR-206ENST00000536876 SULT6B1Q6IMI4 303 aa24.08■■□□□ 1.45
LTBR-206ENST00000536876 CCDC88AQ3V6T2 1871 aa24.08■■□□□ 1.45
LTBR-206ENST00000536876 C1orf141Q5JVX7 400 aa24.07■■□□□ 1.44
LTBR-206ENST00000536876 PIM2Q9P1W9 311 aa24.06■■□□□ 1.44
LTBR-206ENST00000536876 ANKRD31Q8N7Z5 1873 aa24.06■■□□□ 1.44
LTBR-206ENST00000536876 SOS1Q07889 1333 aaPredicted RBP24.06■■□□□ 1.44
LTBR-206ENST00000536876 TM4SF1P30408 202 aa24.05■■□□□ 1.44
LTBR-206ENST00000536876 DNAJC10Q8IXB1 793 aa24.05■■□□□ 1.44
LTBR-206ENST00000536876 RBM46Q8TBY0 533 aaKnown RBP24.05■■□□□ 1.44
LTBR-206ENST00000536876 CLSPNQ9HAW4 1339 aa24.05■■□□□ 1.44
LTBR-206ENST00000536876 PCNTO95613 3336 aa24.05■■□□□ 1.44
LTBR-206ENST00000536876 HTRA3P83110 453 aa24.04■■□□□ 1.44
LTBR-206ENST00000536876 DALRD3Q5D0E6 543 aaKnown RBP24.04■■□□□ 1.44
LTBR-206ENST00000536876 MORC1Q86VD1 984 aa24.04■■□□□ 1.44
LTBR-206ENST00000536876 SCN7AQ01118 1682 aa24.04■■□□□ 1.44
LTBR-206ENST00000536876 COL11A2P13942 1736 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms