RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 TOGARAM1Q9Y4F4 1720 aa24.13■■□□□ 1.45
CCDC61-201ENST00000536603 U2SURPO15042 1029 aaKnown RBP24.13■■□□□ 1.45
CCDC61-201ENST00000536603 HMOX1P09601 288 aa24.13■■□□□ 1.45
CCDC61-201ENST00000536603 COL3A1P02461 1466 aaPredicted RBP24.13■■□□□ 1.45
CCDC61-201ENST00000536603 PKD1L3Q7Z443 1732 aa24.13■■□□□ 1.45
CCDC61-201ENST00000536603 PLEKHO1Q53GL0 409 aaPredicted RBP24.12■■□□□ 1.45
CCDC61-201ENST00000536603 KDRP35968 1356 aa24.12■■□□□ 1.45
CCDC61-201ENST00000536603 IFNL2Q8IZJ0 200 aa24.11■■□□□ 1.45
CCDC61-201ENST00000536603 RALBP1Q15311 655 aa24.1■■□□□ 1.45
CCDC61-201ENST00000536603 AMOTQ4VCS5 1084 aa24.1■■□□□ 1.45
CCDC61-201ENST00000536603 PIGBQ92521 554 aa24.1■■□□□ 1.45
CCDC61-201ENST00000536603 PLEKHG2Q9H7P9 1386 aa24.1■■□□□ 1.45
CCDC61-201ENST00000536603 PHKG2P15735 406 aa24.09■■□□□ 1.45
CCDC61-201ENST00000536603 NKX1-1Q15270 411 aaPredicted RBP24.09■■□□□ 1.45
CCDC61-201ENST00000536603 GOLGB1Q14789 3259 aaKnown RBP24.08■■□□□ 1.45
CCDC61-201ENST00000536603 UBR3Q6ZT12 1888 aa24.07■■□□□ 1.44
CCDC61-201ENST00000536603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.07■■□□□ 1.44
CCDC61-201ENST00000536603 SMIM5Q71RC9 77 aa24.07■■□□□ 1.44
CCDC61-201ENST00000536603 TMOD3Q9NYL9 352 aa24.07■■□□□ 1.44
CCDC61-201ENST00000536603 WWC3Q9ULE0 1092 aa24.07■■□□□ 1.44
CCDC61-201ENST00000536603 NUDCQ9Y266 331 aa24.07■■□□□ 1.44
CCDC61-201ENST00000536603 ATP10DQ9P241 1426 aa24.07■■□□□ 1.44
CCDC61-201ENST00000536603 ZNF530Q6P9A1 599 aaPredicted RBP24.06■■□□□ 1.44
CCDC61-201ENST00000536603 GPBP1L1Q9HC44 474 aaPredicted RBP24.06■■□□□ 1.44
CCDC61-201ENST00000536603 LOC102724428A0A0B4J2F2 783 aa24.05■■□□□ 1.44
CCDC61-201ENST00000536603 SIK1P57059 783 aa24.05■■□□□ 1.44
CCDC61-201ENST00000536603 SSFA2P28290 1259 aa24.04■■□□□ 1.44
CCDC61-201ENST00000536603 AMIGO3Q86WK7 504 aa24.04■■□□□ 1.44
CCDC61-201ENST00000536603 ZNF526Q8TF50 670 aaPredicted RBP24.04■■□□□ 1.44
CCDC61-201ENST00000536603 ATP6V1AP38606 617 aa24.03■■□□□ 1.44
CCDC61-201ENST00000536603 LINC00116Q8NCU8 138 aa24.03■■□□□ 1.44
CCDC61-201ENST00000536603 GNPATO15228 680 aa24.02■■□□□ 1.44
CCDC61-201ENST00000536603 C1orf141Q5JVX7 400 aa24.02■■□□□ 1.44
CCDC61-201ENST00000536603 HSP90AB1P08238 724 aaKnown RBP24.01■■□□□ 1.43
CCDC61-201ENST00000536603 U2AF1L5P0DN76 240 aaPredicted RBP24.01■■□□□ 1.43
CCDC61-201ENST00000536603 U2AF1Q01081 240 aaKnown RBP eCLIP24.01■■□□□ 1.43
CCDC61-201ENST00000536603 ASAP1Q9ULH1 1129 aa24.01■■□□□ 1.43
CCDC61-201ENST00000536603 DCAF5Q96JK2 942 aa24■■□□□ 1.43
CCDC61-201ENST00000536603 MTHFSDQ2M296 383 aaKnown RBP23.99■■□□□ 1.43
CCDC61-201ENST00000536603 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
CCDC61-201ENST00000536603 PRKRIP1Q9H875 184 aaPredicted RBP23.98■■□□□ 1.43
CCDC61-201ENST00000536603 PRKAR2BP31323 418 aa23.97■■□□□ 1.43
CCDC61-201ENST00000536603 ITPK1Q13572 414 aa23.97■■□□□ 1.43
CCDC61-201ENST00000536603 RSPH6AQ9H0K4 717 aa23.97■■□□□ 1.43
CCDC61-201ENST00000536603 AKAP4Q5JQC9 854 aa23.96■■□□□ 1.43
CCDC61-201ENST00000536603 ERVV-2B6SEH9 535 aa23.95■■□□□ 1.42
CCDC61-201ENST00000536603 FCHSD2O94868 740 aa23.95■■□□□ 1.42
CCDC61-201ENST00000536603 RBM42Q9BTD8 480 aaKnown RBP23.95■■□□□ 1.42
CCDC61-201ENST00000536603 ATG3Q9NT62 314 aa23.95■■□□□ 1.42
CCDC61-201ENST00000536603 PHACTR3Q96KR7 559 aa23.94■■□□□ 1.42
CCDC61-201ENST00000536603 KDM6AO15550 1401 aaPredicted RBP23.93■■□□□ 1.42
CCDC61-201ENST00000536603 ADCY9O60503 1353 aa23.93■■□□□ 1.42
CCDC61-201ENST00000536603 MMP10P09238 476 aa23.93■■□□□ 1.42
CCDC61-201ENST00000536603 RTCBQ9Y3I0 505 aaKnown RBP23.93■■□□□ 1.42
CCDC61-201ENST00000536603 CABP4P57796 275 aa23.92■■□□□ 1.42
CCDC61-201ENST00000536603 TRAPPC3LQ5T215 181 aa23.92■■□□□ 1.42
CCDC61-201ENST00000536603 GAS2L2Q8NHY3 880 aa23.92■■□□□ 1.42
CCDC61-201ENST00000536603 LGR6Q9HBX8 967 aa23.91■■□□□ 1.42
CCDC61-201ENST00000536603 RNMTO43148 476 aaKnown RBP23.89■■□□□ 1.41
CCDC61-201ENST00000536603 NLGN1Q8N2Q7 840 aa23.89■■□□□ 1.41
CCDC61-201ENST00000536603 NFATC2IPQ8NCF5 419 aa23.89■■□□□ 1.41
CCDC61-201ENST00000536603 HSPA6P17066 643 aa23.88■■□□□ 1.41
CCDC61-201ENST00000536603 N4BP2Q86UW6 1770 aaPredicted RBP23.88■■□□□ 1.41
CCDC61-201ENST00000536603 BCS1LQ9Y276 419 aa23.87■■□□□ 1.41
CCDC61-201ENST00000536603 CICQ96RK0 1608 aaPredicted RBP23.87■■□□□ 1.41
CCDC61-201ENST00000536603 GNAT3A8MTJ3 354 aa23.86■■□□□ 1.41
CCDC61-201ENST00000536603 RFC4P35249 363 aa23.86■■□□□ 1.41
CCDC61-201ENST00000536603 A0A0G2JLW4 131 aa23.85■■□□□ 1.41
CCDC61-201ENST00000536603 TGFB2P61812 414 aa23.85■■□□□ 1.41
CCDC61-201ENST00000536603 ARHGEF1Q92888 912 aaKnown RBP23.85■■□□□ 1.41
CCDC61-201ENST00000536603 SLC52A2Q9HAB3 445 aa23.85■■□□□ 1.41
CCDC61-201ENST00000536603 SCN11AQ9UI33 1791 aa23.85■■□□□ 1.41
CCDC61-201ENST00000536603 KIF13BQ9NQT8 1826 aa23.84■■□□□ 1.41
CCDC61-201ENST00000536603 PXDNLA1KZ92 1463 aa23.84■■□□□ 1.41
CCDC61-201ENST00000536603 NEFMP07197 916 aa23.84■■□□□ 1.41
CCDC61-201ENST00000536603 IFFO2Q5TF58 517 aa23.84■■□□□ 1.41
CCDC61-201ENST00000536603 CCDC87Q9NVE4 849 aa23.84■■□□□ 1.41
CCDC61-201ENST00000536603 ADRA2BP18089 450 aa23.83■■□□□ 1.41
CCDC61-201ENST00000536603 RC3H1Q5TC82 1133 aaKnown RBP23.83■■□□□ 1.41
CCDC61-201ENST00000536603 IL17REQ8NFR9 667 aa23.83■■□□□ 1.41
CCDC61-201ENST00000536603 SLC4A9Q96Q91 983 aa23.83■■□□□ 1.41
CCDC61-201ENST00000536603 PLEKHF1Q96S99 279 aa23.83■■□□□ 1.41
CCDC61-201ENST00000536603 PNNQ9H307 717 aaKnown RBP23.83■■□□□ 1.41
CCDC61-201ENST00000536603 PARP3Q9Y6F1 533 aa23.83■■□□□ 1.41
CCDC61-201ENST00000536603 ZNF831Q5JPB2 1677 aa23.83■■□□□ 1.4
CCDC61-201ENST00000536603 COL5A3P25940 1745 aaPredicted RBP23.82■■□□□ 1.4
CCDC61-201ENST00000536603 ANP32CO43423 234 aa23.82■■□□□ 1.4
CCDC61-201ENST00000536603 ARHGAP27Q6ZUM4 889 aa23.82■■□□□ 1.4
CCDC61-201ENST00000536603 PTCD1O75127 700 aaKnown RBP23.81■■□□□ 1.4
CCDC61-201ENST00000536603 RPS6KA4O75676 772 aa23.81■■□□□ 1.4
CCDC61-201ENST00000536603 CEP350Q5VT06 3117 aa23.81■■□□□ 1.4
CCDC61-201ENST00000536603 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
CCDC61-201ENST00000536603 C4AP0C0L4 1744 aa23.8■■□□□ 1.4
CCDC61-201ENST00000536603 GYS1P13807 737 aa23.8■■□□□ 1.4
CCDC61-201ENST00000536603 WDR43Q15061 677 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCDC61-201ENST00000536603 KIAA1551Q9HCM1 1747 aa23.8■■□□□ 1.4
CCDC61-201ENST00000536603 KIF3CO14782 793 aa23.79■■□□□ 1.4
CCDC61-201ENST00000536603 C10orf71Q711Q0 1435 aa23.78■■□□□ 1.4
CCDC61-201ENST00000536603 VIRMAQ69YN4 1812 aaKnown RBP23.78■■□□□ 1.4
CCDC61-201ENST00000536603 DPEP1P16444 411 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms