RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 PIM2Q9P1W9 311 aa16.49■□□□□ 0.23
LINC01089-204ENST00000535643 TOGARAM1Q9Y4F4 1720 aa16.48■□□□□ 0.23
LINC01089-204ENST00000535643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.48■□□□□ 0.23
LINC01089-204ENST00000535643 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
LINC01089-204ENST00000535643 ANKRD36BQ8N2N9 1353 aa16.48■□□□□ 0.23
LINC01089-204ENST00000535643 IL2RBP14784 551 aa16.47■□□□□ 0.23
LINC01089-204ENST00000535643 LMNB1P20700 586 aa16.47■□□□□ 0.23
LINC01089-204ENST00000535643 NUDT16Q96DE0 195 aaKnown RBP16.47■□□□□ 0.23
LINC01089-204ENST00000535643 GPR101Q96P66 508 aaPredicted RBP16.47■□□□□ 0.23
LINC01089-204ENST00000535643 TSHZ2Q9NRE2 1034 aa16.47■□□□□ 0.23
LINC01089-204ENST00000535643 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
LINC01089-204ENST00000535643 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
LINC01089-204ENST00000535643 ABT1Q9ULW3 272 aaKnown RBP16.45■□□□□ 0.22
LINC01089-204ENST00000535643 SLIT3O75094 1523 aa16.45■□□□□ 0.22
LINC01089-204ENST00000535643 USP47Q96K76 1375 aa16.44■□□□□ 0.22
LINC01089-204ENST00000535643 CA12O43570 354 aa16.44■□□□□ 0.22
LINC01089-204ENST00000535643 GRM1Q13255 1194 aa16.44■□□□□ 0.22
LINC01089-204ENST00000535643 DPY19L2Q6NUT2 758 aa16.44■□□□□ 0.22
LINC01089-204ENST00000535643 AK7Q96M32 723 aa16.44■□□□□ 0.22
LINC01089-204ENST00000535643 TRIOBPQ9H2D6 2365 aa16.44■□□□□ 0.22
LINC01089-204ENST00000535643 FAM50AQ14320 339 aaKnown RBP16.43■□□□□ 0.22
LINC01089-204ENST00000535643 LDHDQ86WU2 507 aa16.43■□□□□ 0.22
LINC01089-204ENST00000535643 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
LINC01089-204ENST00000535643 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
LINC01089-204ENST00000535643 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
LINC01089-204ENST00000535643 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
LINC01089-204ENST00000535643 ANP32EQ9BTT0 268 aa16.42■□□□□ 0.22
LINC01089-204ENST00000535643 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
LINC01089-204ENST00000535643 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
LINC01089-204ENST00000535643 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
LINC01089-204ENST00000535643 ECE1P42892 770 aa16.4■□□□□ 0.22
LINC01089-204ENST00000535643 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
LINC01089-204ENST00000535643 C4BP0C0L5 1744 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 SSFA2P28290 1259 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 NLRP6P59044 892 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 RGL3Q3MIN7 710 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 DOT1LQ8TEK3 1739 aa16.39■□□□□ 0.21
LINC01089-204ENST00000535643 AOC2O75106 756 aa16.38■□□□□ 0.21
LINC01089-204ENST00000535643 TAF1LQ8IZX4 1826 aa16.38■□□□□ 0.21
LINC01089-204ENST00000535643 ROCK1Q13464 1354 aa16.38■□□□□ 0.21
LINC01089-204ENST00000535643 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
LINC01089-204ENST00000535643 HMGB2P26583 209 aaKnown RBP16.37■□□□□ 0.21
LINC01089-204ENST00000535643 COLQQ9Y215 455 aaPredicted RBP16.37■□□□□ 0.21
LINC01089-204ENST00000535643 MAP2K2P36507 400 aa16.36■□□□□ 0.21
LINC01089-204ENST00000535643 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
LINC01089-204ENST00000535643 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
LINC01089-204ENST00000535643 NEFLP07196 543 aa16.35■□□□□ 0.21
LINC01089-204ENST00000535643 VCANP13611 3396 aa16.34■□□□□ 0.21
LINC01089-204ENST00000535643 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
LINC01089-204ENST00000535643 COL25A1Q9BXS0 654 aaPredicted RBP16.34■□□□□ 0.21
LINC01089-204ENST00000535643 TRAK1Q9UPV9 953 aa16.33■□□□□ 0.2
LINC01089-204ENST00000535643 CHRNA5P30532 468 aa16.32■□□□□ 0.2
LINC01089-204ENST00000535643 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
LINC01089-204ENST00000535643 TAF1DQ9H5J8 278 aaPredicted RBP16.31■□□□□ 0.2
LINC01089-204ENST00000535643 CCDC61Q9Y6R9 512 aa16.31■□□□□ 0.2
LINC01089-204ENST00000535643 PALLDQ8WX93 1383 aa16.3■□□□□ 0.2
LINC01089-204ENST00000535643 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
LINC01089-204ENST00000535643 C4AP0C0L4 1744 aa16.3■□□□□ 0.2
LINC01089-204ENST00000535643 SOX12O15370 315 aa16.29■□□□□ 0.2
LINC01089-204ENST00000535643 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
LINC01089-204ENST00000535643 EAPPQ56P03 285 aaPredicted RBP16.29■□□□□ 0.2
LINC01089-204ENST00000535643 CNTROBQ8N137 903 aa16.29■□□□□ 0.2
LINC01089-204ENST00000535643 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
LINC01089-204ENST00000535643 HPS5Q9UPZ3 1129 aa16.29■□□□□ 0.2
LINC01089-204ENST00000535643 BRCA2P51587 3418 aa16.28■□□□□ 0.2
LINC01089-204ENST00000535643 RANBP2P49792 3224 aaKnown RBP16.28■□□□□ 0.2
LINC01089-204ENST00000535643 IQCA1LA6NCM1 817 aa16.28■□□□□ 0.2
LINC01089-204ENST00000535643 NFKBIEO00221 500 aa16.28■□□□□ 0.2
LINC01089-204ENST00000535643 ANP32CO43423 234 aa16.28■□□□□ 0.2
LINC01089-204ENST00000535643 MAP1SQ66K74 1059 aaPredicted RBP16.28■□□□□ 0.2
LINC01089-204ENST00000535643 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.2
LINC01089-204ENST00000535643 TMF1P82094 1093 aa16.27■□□□□ 0.2
LINC01089-204ENST00000535643 CLEC11AQ9Y240 323 aa16.27■□□□□ 0.2
LINC01089-204ENST00000535643 PARP3Q9Y6F1 533 aa16.27■□□□□ 0.2
LINC01089-204ENST00000535643 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
LINC01089-204ENST00000535643 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
LINC01089-204ENST00000535643 CACNA1AO00555 2505 aa16.26■□□□□ 0.19
LINC01089-204ENST00000535643 ERFEQ4G0M1 354 aa16.25■□□□□ 0.19
LINC01089-204ENST00000535643 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
LINC01089-204ENST00000535643 PRDM6Q9NQX0 595 aa16.25■□□□□ 0.19
LINC01089-204ENST00000535643 SPTBN5Q9NRC6 3674 aaKnown RBP16.25■□□□□ 0.19
LINC01089-204ENST00000535643 GNPATO15228 680 aa16.24■□□□□ 0.19
LINC01089-204ENST00000535643 CIAPIN1Q6FI81 312 aa16.24■□□□□ 0.19
LINC01089-204ENST00000535643 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
LINC01089-204ENST00000535643 KCNH5Q8NCM2 988 aa16.23■□□□□ 0.19
LINC01089-204ENST00000535643 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
LINC01089-204ENST00000535643 TONSLQ96HA7 1378 aa16.23■□□□□ 0.19
LINC01089-204ENST00000535643 ADAMTSL1Q8N6G6 1762 aa16.23■□□□□ 0.19
LINC01089-204ENST00000535643 FMR1Q06787 632 aaKnown RBP eCLIP16.22■□□□□ 0.19
LINC01089-204ENST00000535643 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
LINC01089-204ENST00000535643 FKBP8Q14318 412 aa16.22■□□□□ 0.19
LINC01089-204ENST00000535643 CEP290O15078 2479 aa16.21■□□□□ 0.19
LINC01089-204ENST00000535643 ITGAEP38570 1179 aa16.21■□□□□ 0.19
LINC01089-204ENST00000535643 CTU1Q7Z7A3 348 aaKnown RBP16.21■□□□□ 0.19
LINC01089-204ENST00000535643 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
LINC01089-204ENST00000535643 TLL2Q9Y6L7 1015 aa16.21■□□□□ 0.19
LINC01089-204ENST00000535643 ADGRB1O14514 1584 aa16.21■□□□□ 0.18
LINC01089-204ENST00000535643 COL9A1P20849 921 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms