RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 CHMP4AQ9BY43 222 aa30.28■■■□□ 2.44
PTPMT1-205ENST00000534775 KDM2BQ8NHM5 1336 aa30.27■■■□□ 2.44
PTPMT1-205ENST00000534775 LARP1Q6PKG0 1096 aaKnown RBP30.26■■■□□ 2.44
PTPMT1-205ENST00000534775 TMEM57Q8N5G2 664 aa30.26■■■□□ 2.44
PTPMT1-205ENST00000534775 CACNA1FO60840 1977 aa30.26■■■□□ 2.43
PTPMT1-205ENST00000534775 CCDC30Q5VVM6 783 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 CHMP4BQ9H444 224 aaKnown RBP30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 BTG4Q9NY30 223 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 PTPRCP08575 1304 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 HOXB7P09629 217 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 IL2RBP14784 551 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 STK31Q9BXU1 1019 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 ABCC4O15439 1325 aa30.25■■■□□ 2.43
PTPMT1-205ENST00000534775 DCAF5Q96JK2 942 aa30.24■■■□□ 2.43
PTPMT1-205ENST00000534775 KDM6AO15550 1401 aaPredicted RBP30.24■■■□□ 2.43
PTPMT1-205ENST00000534775 EIF4A1P60842 406 aaKnown RBP30.23■■■□□ 2.43
PTPMT1-205ENST00000534775 PCDH11XQ9BZA7 1347 aa30.23■■■□□ 2.43
PTPMT1-205ENST00000534775 PCDH11YQ9BZA8 1340 aa30.23■■■□□ 2.43
PTPMT1-205ENST00000534775 ZCRB1Q8TBF4 217 aaKnown RBP30.22■■■□□ 2.43
PTPMT1-205ENST00000534775 CYP27B1O15528 508 aa30.22■■■□□ 2.43
PTPMT1-205ENST00000534775 SLC4A2P04920 1241 aa30.22■■■□□ 2.43
PTPMT1-205ENST00000534775 MRC1P22897 1456 aa30.22■■■□□ 2.43
PTPMT1-205ENST00000534775 SLC52A2Q9HAB3 445 aa30.2■■■□□ 2.43
PTPMT1-205ENST00000534775 PLCH1Q4KWH8 1693 aa30.2■■■□□ 2.42
PTPMT1-205ENST00000534775 HDGFL1Q5TGJ6 251 aa30.16■■■□□ 2.42
PTPMT1-205ENST00000534775 SHANK3Q9BYB0 1731 aa30.16■■■□□ 2.42
PTPMT1-205ENST00000534775 RGS12O14924 1447 aa30.15■■■□□ 2.42
PTPMT1-205ENST00000534775 KCNQ3O43525 872 aa30.14■■■□□ 2.41
PTPMT1-205ENST00000534775 ZBTB40Q9NUA8 1239 aa30.14■■■□□ 2.41
PTPMT1-205ENST00000534775 PCDHB15Q9Y5E8 787 aa30.14■■■□□ 2.41
PTPMT1-205ENST00000534775 RWDD1Q9H446 243 aaPredicted RBP30.13■■■□□ 2.41
PTPMT1-205ENST00000534775 HEG1Q9ULI3 1381 aa30.13■■■□□ 2.41
PTPMT1-205ENST00000534775 INTS3Q68E01 1043 aaKnown RBP30.12■■■□□ 2.41
PTPMT1-205ENST00000534775 NRAPQ86VF7 1730 aa30.12■■■□□ 2.41
PTPMT1-205ENST00000534775 ADAMTS2O95450 1211 aa30.11■■■□□ 2.41
PTPMT1-205ENST00000534775 IGHDP01880 384 aa30.11■■■□□ 2.41
PTPMT1-205ENST00000534775 NKX1-1Q15270 411 aaPredicted RBP30.11■■■□□ 2.41
PTPMT1-205ENST00000534775 NFATC2IPQ8NCF5 419 aa30.11■■■□□ 2.41
PTPMT1-205ENST00000534775 TSHZ2Q9NRE2 1034 aa30.11■■■□□ 2.41
PTPMT1-205ENST00000534775 NWD2Q9ULI1 1742 aa30.1■■■□□ 2.41
PTPMT1-205ENST00000534775 CABP4P57796 275 aa30.1■■■□□ 2.41
PTPMT1-205ENST00000534775 ZNF790Q6PG37 636 aa30.1■■■□□ 2.41
PTPMT1-205ENST00000534775 USP35Q9P2H5 1018 aa30.1■■■□□ 2.41
PTPMT1-205ENST00000534775 WNK3Q9BYP7 1800 aa30.09■■■□□ 2.41
PTPMT1-205ENST00000534775 ZBTB7BO15156 539 aaPredicted RBP30.09■■■□□ 2.41
PTPMT1-205ENST00000534775 NECTIN2Q92692 538 aa30.09■■■□□ 2.41
PTPMT1-205ENST00000534775 FLIIQ13045 1269 aa30.08■■■□□ 2.41
PTPMT1-205ENST00000534775 G2E3Q7L622 706 aa30.08■■■□□ 2.41
PTPMT1-205ENST00000534775 DISP2A7MBM2 1401 aa30.08■■■□□ 2.41
PTPMT1-205ENST00000534775 GIGYF1O75420 1035 aaPredicted RBP30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 JCADQ9P266 1359 aa30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 NUTM2BA6NNL0 878 aaPredicted RBP30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 NUTM2EB1AL46 878 aaPredicted RBP30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 ERVV-2B6SEH9 535 aa30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 EIF2S2P20042 333 aaKnown RBP30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 NUTM2AQ8IVF1 878 aaPredicted RBP30.07■■■□□ 2.4
PTPMT1-205ENST00000534775 HDAC1Q13547 482 aaPredicted RBP30.05■■■□□ 2.4
PTPMT1-205ENST00000534775 TTC5Q8N0Z6 440 aa30.05■■■□□ 2.4
PTPMT1-205ENST00000534775 DDX54Q8TDD1 881 aaKnown RBP30.05■■■□□ 2.4
PTPMT1-205ENST00000534775 FKBP5Q13451 457 aaPredicted RBP30.04■■■□□ 2.4
PTPMT1-205ENST00000534775 CCT4P50991 539 aaKnown RBP30.04■■■□□ 2.4
PTPMT1-205ENST00000534775 N4BP2Q86UW6 1770 aaPredicted RBP30.03■■■□□ 2.4
PTPMT1-205ENST00000534775 SLC39A6Q13433 755 aa30.02■■■□□ 2.4
PTPMT1-205ENST00000534775 CDCA7Q9BWT1 371 aaPredicted RBP30.02■■■□□ 2.4
PTPMT1-205ENST00000534775 DBF4Q9UBU7 674 aaPredicted RBP30.02■■■□□ 2.4
PTPMT1-205ENST00000534775 PXDNLA1KZ92 1463 aa30.02■■■□□ 2.4
PTPMT1-205ENST00000534775 SLIT2O94813 1529 aa30.01■■■□□ 2.39
PTPMT1-205ENST00000534775 CHPF2Q9P2E5 772 aa30.01■■■□□ 2.39
PTPMT1-205ENST00000534775 THRAP3Q9Y2W1 955 aaKnown RBP30.01■■■□□ 2.39
PTPMT1-205ENST00000534775 C5P01031 1676 aa30■■■□□ 2.39
PTPMT1-205ENST00000534775 FMNL2Q96PY5 1086 aa29.99■■■□□ 2.39
PTPMT1-205ENST00000534775 PAPPAQ13219 1627 aa29.98■■■□□ 2.39
PTPMT1-205ENST00000534775 SPATA31A1Q5TZJ5 1347 aa29.97■■■□□ 2.39
PTPMT1-205ENST00000534775 SLC4A10Q6U841 1118 aa29.97■■■□□ 2.39
PTPMT1-205ENST00000534775 TOGARAM1Q9Y4F4 1720 aa29.97■■■□□ 2.39
PTPMT1-205ENST00000534775 F6X3S4 739 aa29.96■■■□□ 2.39
PTPMT1-205ENST00000534775 SNRPA1P09661 255 aaKnown RBP29.96■■■□□ 2.39
PTPMT1-205ENST00000534775 ZNF496Q96IT1 587 aaPredicted RBP29.96■■■□□ 2.39
PTPMT1-205ENST00000534775 PHAXQ9H814 394 aaKnown RBP29.96■■■□□ 2.39
PTPMT1-205ENST00000534775 UBR2Q8IWV8 1755 aa29.96■■■□□ 2.39
PTPMT1-205ENST00000534775 SPATA31A6Q5VVP1 1343 aa29.95■■■□□ 2.39
PTPMT1-205ENST00000534775 LRP6O75581 1613 aa29.95■■■□□ 2.39
PTPMT1-205ENST00000534775 LAMB4A4D0S4 1761 aa29.95■■■□□ 2.38
PTPMT1-205ENST00000534775 EXOC5O00471 708 aa29.95■■■□□ 2.38
PTPMT1-205ENST00000534775 TNS2Q63HR2 1409 aa29.95■■■□□ 2.38
PTPMT1-205ENST00000534775 HSPA1LP34931 641 aa29.94■■■□□ 2.38
PTPMT1-205ENST00000534775 HYPKQ9NX55 129 aa29.94■■■□□ 2.38
PTPMT1-205ENST00000534775 DDX21Q9NR30 783 aaKnown RBP eCLIP29.93■■■□□ 2.38
PTPMT1-205ENST00000534775 SPATA31A5Q5VU36 1347 aa29.92■■■□□ 2.38
PTPMT1-205ENST00000534775 SPATA31A7Q8IWB4 1347 aa29.92■■■□□ 2.38
PTPMT1-205ENST00000534775 PRAMEF22A3QJZ6 481 aa29.92■■■□□ 2.38
PTPMT1-205ENST00000534775 C1orf115Q9H7X2 142 aa29.9■■■□□ 2.38
PTPMT1-205ENST00000534775 TMOD3Q9NYL9 352 aa29.9■■■□□ 2.38
PTPMT1-205ENST00000534775 GLI3P10071 1580 aa29.9■■■□□ 2.38
PTPMT1-205ENST00000534775 UNC5CLQ8IV45 518 aa29.89■■■□□ 2.37
PTPMT1-205ENST00000534775 SMC5Q8IY18 1101 aa29.89■■■□□ 2.37
PTPMT1-205ENST00000534775 BARGINQ6ZT62 677 aa29.88■■■□□ 2.37
PTPMT1-205ENST00000534775 SKAP1Q86WV1 359 aa29.88■■■□□ 2.37
PTPMT1-205ENST00000534775 MEIS3Q99687 375 aa29.88■■■□□ 2.37
PTPMT1-205ENST00000534775 ITGB4P16144 1822 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms