RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
CCDC90B-219ENST00000534753 CRISPLD2Q9H0B8 497 aa12.27□□□□□ -0.45
CCDC90B-219ENST00000534753 EMILIN1Q9Y6C2 1016 aa12.27□□□□□ -0.45
CCDC90B-219ENST00000534753 WNK3Q9BYP7 1800 aa12.27□□□□□ -0.45
CCDC90B-219ENST00000534753 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
CCDC90B-219ENST00000534753 HSP90AB2PQ58FF8 381 aa12.26□□□□□ -0.45
CCDC90B-219ENST00000534753 PTF1AQ7RTS3 328 aa12.26□□□□□ -0.45
CCDC90B-219ENST00000534753 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
CCDC90B-219ENST00000534753 TNS1Q9HBL0 1735 aaKnown RBP12.25□□□□□ -0.45
CCDC90B-219ENST00000534753 DISP2A7MBM2 1401 aa12.25□□□□□ -0.45
CCDC90B-219ENST00000534753 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
CCDC90B-219ENST00000534753 PDE4AP27815 886 aa12.24□□□□□ -0.45
CCDC90B-219ENST00000534753 R3HDM1Q15032 1099 aaKnown RBP12.24□□□□□ -0.45
CCDC90B-219ENST00000534753 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
CCDC90B-219ENST00000534753 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
CCDC90B-219ENST00000534753 CAMKK2Q96RR4 588 aa12.24□□□□□ -0.45
CCDC90B-219ENST00000534753 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 POTEIP0CG38 1075 aa12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 MFSD10Q14728 455 aa12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 KNSTRNQ9Y448 316 aa12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 RGPD2P0DJD1 1756 aa12.23□□□□□ -0.45
CCDC90B-219ENST00000534753 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 FLT4P35916 1363 aa12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 KCNQ2O43526 872 aa12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 RAPGEF4Q8WZA2 1011 aa12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 PEAK1Q9H792 1746 aa12.22□□□□□ -0.45
CCDC90B-219ENST00000534753 INSRP06213 1382 aa12.21□□□□□ -0.45
CCDC90B-219ENST00000534753 SEMA3EO15041 775 aa12.21□□□□□ -0.45
CCDC90B-219ENST00000534753 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC90B-219ENST00000534753 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
CCDC90B-219ENST00000534753 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
CCDC90B-219ENST00000534753 FAM208AQ9UK61 1670 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-219ENST00000534753 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
CCDC90B-219ENST00000534753 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
CCDC90B-219ENST00000534753 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
CCDC90B-219ENST00000534753 POLKQ9UBT6 870 aa12.2□□□□□ -0.46
CCDC90B-219ENST00000534753 SBF2Q86WG5 1849 aa12.19□□□□□ -0.46
CCDC90B-219ENST00000534753 MEGF6O75095 1541 aa12.18□□□□□ -0.46
CCDC90B-219ENST00000534753 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-219ENST00000534753 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
CCDC90B-219ENST00000534753 PARD3Q8TEW0 1356 aa12.18□□□□□ -0.46
CCDC90B-219ENST00000534753 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
CCDC90B-219ENST00000534753 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
CCDC90B-219ENST00000534753 WASHC2AQ641Q2 1341 aa12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 PLSCR1O15162 318 aa12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 EYA1Q99502 592 aa12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 ANKRD26Q9UPS8 1709 aa12.16□□□□□ -0.46
CCDC90B-219ENST00000534753 EIF4A2Q14240 407 aaKnown RBP12.15□□□□□ -0.46
CCDC90B-219ENST00000534753 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
CCDC90B-219ENST00000534753 NSD2O96028 1365 aa12.15□□□□□ -0.46
CCDC90B-219ENST00000534753 NUP188Q5SRE5 1749 aa12.14□□□□□ -0.47
CCDC90B-219ENST00000534753 BCL9O00512 1426 aa12.14□□□□□ -0.47
CCDC90B-219ENST00000534753 RREB1Q92766 1687 aa12.14□□□□□ -0.47
CCDC90B-219ENST00000534753 CLCN6P51797 869 aa12.14□□□□□ -0.47
CCDC90B-219ENST00000534753 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
CCDC90B-219ENST00000534753 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
CCDC90B-219ENST00000534753 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-219ENST00000534753 STK32BQ9NY57 414 aa12.13□□□□□ -0.47
CCDC90B-219ENST00000534753 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 KCNQ4P56696 695 aa12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 IRX5P78411 483 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 PPP1R15BQ5SWA1 713 aa12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
CCDC90B-219ENST00000534753 BTAF1O14981 1849 aa12.11□□□□□ -0.47
CCDC90B-219ENST00000534753 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
CCDC90B-219ENST00000534753 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-219ENST00000534753 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
CCDC90B-219ENST00000534753 DOT1LQ8TEK3 1739 aa12.11□□□□□ -0.47
CCDC90B-219ENST00000534753 CYP27B1O15528 508 aa12.1□□□□□ -0.47
CCDC90B-219ENST00000534753 MTHFSP49914 203 aa12.1□□□□□ -0.47
CCDC90B-219ENST00000534753 GPHNQ9NQX3 736 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-219ENST00000534753 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
CCDC90B-219ENST00000534753 POTEMA6NI47 508 aa12.09□□□□□ -0.47
CCDC90B-219ENST00000534753 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-219ENST00000534753 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-219ENST00000534753 RGPD3A6NKT7 1758 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 RGPD4Q7Z3J3 1758 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 ZBTB7AO95365 584 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 DSG2Q14126 1118 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 AEBP1Q8IUX7 1158 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 LRRC4BQ9NT99 713 aa12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-219ENST00000534753 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-219ENST00000534753 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 HMOX1P09601 288 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
CCDC90B-219ENST00000534753 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms